Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 6.2e-132 474.2 244 100.0
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 2.4e-120 435.6 242 92.1
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 3.9e-118 428.3 245 91.4
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 1.5e-117 426.4 245 91.0
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 2.5e-117 425.6 245 91.0
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 2.5e-117 425.6 245 91.0
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 6.2e-116 421.0 245 89.8
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 7.1e-112 407.5 245 88.2
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 2.7e-111 405.6 244 88.1
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 4.6e-111 404.8 244 86.9
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 8.1e-108 394.0 228 89.5
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 2.2e-105 386.0 244 84.0
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 1.5e-93 346.7 246 79.3
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 2.5e-93 345.9 193 93.3
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 4.3e-93 345.1 247 78.9
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 2.8e-92 342.4 248 78.2
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 3.7e-92 342.0 246 78.5
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 1.4e-88 330.1 234 77.8
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 1.1e-83 313.9 246 69.1
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 6.7e-78 294.7 222 70.7
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 3.1e-75 285.8 237 69.6
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 1.4e-59 233.8 241 55.6
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 3.1e-59 232.6 246 56.1
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 7.7e-58 228.0 228 57.5
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 8.5e-57 224.6 244 54.5
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 1.5e-56 223.8 238 52.9
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 1.9e-56 223.4 235 56.6
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 5.5e-56 221.9 235 52.8
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 2.7e-55 219.5 240 51.2
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 2.7e-55 219.5 238 53.4
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 4.7e-55 218.8 226 54.4
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 4.7e-55 218.8 236 56.8
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 4.7e-55 218.8 239 53.6
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 8.0e-55 218.0 248 51.6
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 1.0e-54 217.6 244 55.7
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 1.8e-54 216.9 238 53.4
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 1.2e-53 214.2 240 51.7
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 2.0e-53 213.4 217 55.8
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 2.0e-53 213.4 218 55.5
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 2.6e-53 213.0 239 52.3
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 5.7e-53 211.8 246 52.0
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 5.7e-53 211.8 232 52.2
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 5.7e-53 211.8 235 54.0
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 9.7e-53 211.1 239 54.4
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 9.7e-53 211.1 245 50.6
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 9.7e-53 211.1 231 51.5
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 1.3e-52 210.7 232 51.7
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.7e-52 210.3 232 52.2
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 2.2e-52 209.9 210 52.9
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.2e-52 209.9 232 52.2
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 2.2e-52 209.9 226 54.0
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 3.7e-52 209.1 214 54.7
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 4.8e-52 208.8 220 55.9
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 8.2e-52 208.0 243 51.0
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 8.2e-52 208.0 239 54.0
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 8.2e-52 208.0 248 50.0
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 1.1e-51 207.6 243 50.6
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.8e-51 206.8 232 50.9
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 2.4e-51 206.5 240 51.2
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 9.1e-51 204.5 213 53.1
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 9.1e-51 204.5 238 51.7
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 1.6e-50 203.8 243 51.0
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 3.5e-50 202.6 240 49.2
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 5.9e-50 201.8 239 52.7
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 5.9e-50 201.8 236 50.4
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 7.7e-50 201.4 227 50.7
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 1.0e-49 201.1 218 54.6
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 2.9e-49 199.5 238 49.6
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 3.8e-49 199.1 242 49.6
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 3.8e-49 199.1 243 51.4
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 6.5e-49 198.4 234 54.7
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 3.2e-48 196.1 233 48.9
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 4.2e-48 195.7 240 50.4
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 7.2e-48 194.9 239 47.3
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 1.2e-47 194.1 241 50.6
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 1.2e-47 194.1 221 51.6
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 2.7e-47 193.0 241 51.0
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 6.1e-47 191.8 262 46.6
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 8.0e-47 191.4 215 51.2
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 1.0e-46 191.0 236 47.0
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 1.0e-46 191.0 239 48.1
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 1.8e-46 190.3 239 48.5
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 2.3e-46 189.9 255 49.0
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 4.0e-46 189.1 249 49.0
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 5.2e-46 188.7 209 51.7
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 6.8e-46 188.3 234 48.3
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 8.8e-46 188.0 194 52.6
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 1.5e-45 187.2 237 49.4
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 3.4e-45 186.0 232 51.3
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 4.4e-45 185.7 218 50.9
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 4.4e-45 185.7 215 49.3
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 8.3e-44 181.4 245 49.8
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 1.1e-43 181.0 265 44.9
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 1.1e-43 181.0 210 46.7
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 3.1e-43 179.5 193 50.8
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 3.1e-43 179.5 220 49.1
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 1.6e-42 177.2 249 44.2
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 7.7e-42 174.9 217 50.7
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 7.7e-42 174.9 249 43.0
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 1.0e-41 174.5 210 52.9
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 2.3e-41 173.3 241 45.6
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 5.0e-41 172.2 240 42.1
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 6.6e-41 171.8 215 47.4
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 1.9e-40 170.2 237 45.6
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 1.9e-40 170.2 237 45.6
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 3.3e-40 169.5 193 55.4
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 7.2e-40 168.3 213 48.4
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 3.6e-39 166.0 203 49.3
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 1.0e-38 164.5 216 45.4
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 4.0e-38 162.5 244 41.4
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 5.2e-38 162.2 251 43.0
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 6.8e-38 161.8 232 43.5
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 1.2e-37 161.0 220 46.4
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 4.4e-37 159.1 285 40.4
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 4.4e-37 159.1 232 44.0
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 9.2e-35 151.4 278 39.9
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 3.5e-34 149.4 220 41.4
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 8.6e-33 144.8 188 46.3
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 7.3e-32 141.7 205 43.4
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 1.8e-30 137.1 181 47.0
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.0e-25 121.3 242 38.4
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 1.1e-24 117.9 214 40.2
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 5.2e-22 109.0 139 45.3
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 3.7e-20 102.8 242 39.7
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 1.9e-16 90.5 91 54.9
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 1.1e-11 74.7 134 39.6
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 7.8e-10 68.6 115 45.2
Pp3c15_7400 Physcomitrium patens HOM05D000098 ORTHO05D000523 2.1e-07 60.5 92 35.9
SMO358G0407 Selaginella moellendorffii HOM05D024008 ORTHO05D000523 8.9e-06 55.1 192 31.8


User provided reference genes

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