Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g18390 Schrenkiella parvula HOM05D007494 ORTHO05D009621 1.3e-105 386.3 189 100.0
BraA08t34811Z Brassica rapa HOM05D007494 ORTHO05D009621 1.2e-66 256.9 183 72.1
A08p28830 Brassica napus HOM05D007494 ORTHO05D009621 1.0e-65 253.8 183 71.0
C08p21040 Brassica napus HOM05D007494 ORTHO05D009621 1.5e-64 250.0 182 69.8
BcaC07g39120 Brassica carinata HOM05D007494 ORTHO05D009621 2.5e-64 249.2 182 69.8
BcaB03g11879 Brassica carinata HOM05D007494 ORTHO05D009621 2.1e-63 246.1 182 69.2
BcaB03g12780 Brassica carinata HOM05D007494 ORTHO05D009621 1.8e-62 243.0 183 69.4
BolC8t49740H Brassica oleracea HOM05D007494 ORTHO05D009621 1.8e-62 243.0 182 69.8
AT1G20240 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 6.8e-54 214.5 184 61.4
A03p18740 Brassica napus HOM05D007494 ORTHO05D009621 1.7e-52 209.9 161 65.8
BraA03t11134Z Brassica rapa HOM05D007494 ORTHO05D009621 6.4e-52 208.0 161 65.2
AL1G33970 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 7.1e-51 204.5 188 59.6
BcaC07g39114 Brassica carinata HOM05D007494 ORTHO05D009621 2.7e-50 202.6 182 61.0
Carub.0005s1178 Capsella rubella HOM05D007494 ORTHO05D009621 1.7e-49 199.9 187 58.8
AT1G20690 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.3e-49 199.5 186 58.6
AT1G20940 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.2e-47 193.7 188 58.0
AL1G45220 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 6.8e-46 188.0 186 57.0
AL1G33230 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.1e-43 180.6 159 59.1
BolC8t49745H Brassica oleracea HOM05D007494 ORTHO05D009621 3.2e-43 179.1 107 80.4
AT1G20735 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 4.6e-42 175.3 185 53.5
Carub.0004s0895 Capsella rubella HOM05D007494 ORTHO05D009621 3.0e-41 172.6 186 52.7
AT1G20290 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.1e-39 166.4 179 57.0
AL1G33090 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.4e-38 163.7 159 57.2
Carub.0001s2057 Capsella rubella HOM05D007494 ORTHO05D009621 5.8e-37 158.3 204 46.6
CARHR020740 Cardamine hirsuta HOM05D007494 ORTHO05D009621 7.8e-34 147.9 154 52.6
AT1G20360 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.1e-32 144.1 93 76.3
AL1G67140 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.2e-29 134.0 155 48.4
AT1G20795 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 5.8e-29 131.7 173 46.2
AL1G33790 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 9.9e-29 131.0 191 42.4
Thhalv10011090m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.7e-28 130.2 186 41.9
Carub.0001s2025 Capsella rubella HOM05D007494 ORTHO05D009621 2.9e-28 129.4 177 43.5
A09p43390 Brassica napus HOM05D007494 ORTHO05D009621 3.8e-28 129.0 188 40.4
AL5G30530 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 6.4e-28 128.3 197 42.6
AT1G57565 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.9e-27 126.7 162 45.1
BcaB01g00617 Brassica carinata HOM05D007494 ORTHO05D009621 4.2e-27 125.6 186 40.3
BcaC07g39499 Brassica carinata HOM05D007494 ORTHO05D009621 4.2e-27 125.6 188 39.4
C08p25440 Brassica napus HOM05D007494 ORTHO05D009621 4.2e-27 125.6 188 39.4
AT1G20790 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.6e-26 123.6 154 48.7
Thhalv10015953m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.1e-26 123.2 161 47.8
AT1G57580 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 3.0e-25 119.4 188 41.5
BcaC07g39504 Brassica carinata HOM05D007494 ORTHO05D009621 1.9e-24 116.7 181 41.4
C08p25490 Brassica napus HOM05D007494 ORTHO05D009621 1.9e-24 116.7 181 41.4
BolC8t50168H Brassica oleracea HOM05D007494 ORTHO05D009621 2.5e-24 116.3 182 40.1
Carub.0001s1977 Capsella rubella HOM05D007494 ORTHO05D009621 2.5e-24 116.3 71 78.9
Thhalv10009430m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 4.3e-24 115.5 155 44.5
BcaC07g39053 Brassica carinata HOM05D007494 ORTHO05D009621 9.6e-24 114.4 160 41.9
BcaB07g30752 Brassica carinata HOM05D007494 ORTHO05D009621 1.3e-23 114.0 157 42.0
Carub.0001s2024 Capsella rubella HOM05D007494 ORTHO05D009621 1.3e-23 114.0 191 39.3
BraA09t39811Z Brassica rapa HOM05D007494 ORTHO05D009621 2.1e-23 113.2 155 45.8
A08p29250 Brassica napus HOM05D007494 ORTHO05D009621 2.8e-23 112.8 160 41.2
BraA08t34860Z Brassica rapa HOM05D007494 ORTHO05D009621 2.8e-23 112.8 160 41.2
AT1G20800 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 4.8e-23 112.1 161 44.1
A09p43410 Brassica napus HOM05D007494 ORTHO05D009621 6.2e-23 111.7 182 38.5
BcaC07g39500 Brassica carinata HOM05D007494 ORTHO05D009621 2.4e-22 109.8 181 39.2
C08p25460 Brassica napus HOM05D007494 ORTHO05D009621 2.4e-22 109.8 181 39.2
BcaB03g13899 Brassica carinata HOM05D007494 ORTHO05D009621 3.1e-22 109.4 136 43.4
BcaB03g12853 Brassica carinata HOM05D007494 ORTHO05D009621 5.3e-22 108.6 157 40.8
C08p20370 Brassica napus HOM05D007494 ORTHO05D009621 9.0e-22 107.8 160 40.0
BolC8t49665H Brassica oleracea HOM05D007494 ORTHO05D009621 9.0e-22 107.8 160 40.0
BraA09t39810Z Brassica rapa HOM05D007494 ORTHO05D009621 2.0e-21 106.7 152 42.1
Thhalv10012236m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.0e-21 106.7 134 49.3
Thhalv10011940m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 3.4e-21 105.9 134 49.3
THA.LOC104813281 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 9.9e-21 104.4 136 43.4
Thhalv10012024m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.3e-20 104.0 132 48.5
BcaB02g08200 Brassica carinata HOM05D007494 ORTHO05D009621 1.7e-20 103.6 165 40.0
Sp1g18490 Schrenkiella parvula HOM05D007494 ORTHO05D009621 2.2e-20 103.2 135 45.2
Thhalv10012172m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 6.0e-18 95.1 158 39.9
Aa31LG7G4950 Aethionema arabicum HOM05D007494 ORTHO05D009621 6.7e-17 91.7 156 37.2
THA.LOC104813247 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 8.7e-17 91.3 135 38.5
BolC8t50166H Brassica oleracea HOM05D007494 ORTHO05D009621 4.3e-16 89.0 100 48.0
Thhalv10012123m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 4.3e-16 89.0 112 50.9
C08p21030 Brassica napus HOM05D007494 ORTHO05D009621 2.8e-15 86.3 45 86.7
Sp5g11780 Schrenkiella parvula HOM05D007494 ORTHO05D009621 1.1e-14 84.3 86 55.8
BraA09t39809Z Brassica rapa HOM05D007494 ORTHO05D009621 3.1e-14 82.8 101 40.6
AL1G32830 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 8.4e-12 74.7 48 77.1
A09p43420 Brassica napus HOM05D007494 ORTHO05D009621 1.1e-11 74.3 95 44.2
BcaB01g00618 Brassica carinata HOM05D007494 ORTHO05D009621 3.2e-11 72.8 181 34.8
THA.LOC104813248 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 3.5e-10 69.3 158 29.7
Thhalv10012136m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.0e-09 67.8 141 31.9
Aa31LG7G4960 Aethionema arabicum HOM05D007494 ORTHO05D009621 8.7e-09 64.7 113 34.5
BcaC01g05840 Brassica carinata HOM05D007494 ORTHO05D009621 8.7e-09 64.7 76 48.7
Aa31LG8G15360 Aethionema arabicum HOM05D007494 ORTHO05D009621 3.3e-08 62.8 103 37.9
AL8G44280 Arabidopsis lyrata HOM05D000015 ORTHO05D000734 3.3e-08 62.8 86 41.9
A09p43460 Brassica napus HOM05D007494 ORTHO05D009621 3.3e-08 62.8 73 49.3
BcaC07g39503 Brassica carinata HOM05D007494 ORTHO05D032917 1.4e-06 57.4 97 35.1
C08p25480 Brassica napus HOM05D007494 ORTHO05D032917 1.4e-06 57.4 97 35.1


User provided reference genes

Program Settings