Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g17840 Schrenkiella parvula HOM05D009961 ORTHO05D008483 7.2e-99 364.0 196 100.0
A07p16020 Brassica napus HOM05D009961 ORTHO05D008483 1.1e-78 297.0 196 80.6
BraA07t29330Z Brassica rapa HOM05D009961 ORTHO05D008483 9.2e-78 293.9 196 79.6
BolC7t42871H Brassica oleracea HOM05D009961 ORTHO05D008483 2.0e-77 292.7 195 80.0
BcaB07g32022 Brassica carinata HOM05D009961 ORTHO05D008483 1.5e-75 286.6 197 83.8
A06p16220 Brassica napus HOM05D009961 ORTHO05D008483 4.3e-75 285.0 197 82.2
Thhalv10008606m.g Eutrema salsugineum HOM05D009961 ORTHO05D008483 7.3e-75 284.3 193 81.9
CARHR020550 Cardamine hirsuta HOM05D009961 ORTHO05D008483 3.6e-74 282.0 197 78.7
BcaC05g25901 Brassica carinata HOM05D009961 ORTHO05D008483 8.0e-74 280.8 198 83.8
C05p18560 Brassica napus HOM05D009961 ORTHO05D008483 8.0e-74 280.8 198 83.8
C07p23380 Brassica napus HOM05D009961 ORTHO05D008483 1.4e-73 280.0 183 80.3
BolC5t30567H Brassica oleracea HOM05D009961 ORTHO05D008483 2.3e-73 279.3 198 83.3
AT1G20070 Arabidopsis thaliana HOM05D009961 ORTHO05D008483 6.4e-71 271.2 197 75.1
AL1G32880 Arabidopsis lyrata HOM05D009961 ORTHO05D008483 8.3e-71 270.8 197 76.1
Carub.0001s1960 Capsella rubella HOM05D009961 ORTHO05D008483 6.6e-68 261.2 198 74.7
BcaB03g14337 Brassica carinata HOM05D009961 ORTHO05D008483 1.2e-66 256.9 196 75.5
C08p19900 Brassica napus HOM05D009961 ORTHO05D008483 4.7e-66 255.0 196 76.5
BolC8t49628H Brassica oleracea HOM05D009961 ORTHO05D008483 4.7e-66 255.0 196 76.5
BcaC07g39017 Brassica carinata HOM05D009961 ORTHO05D008483 1.8e-65 253.1 196 76.5
BraA06t24726Z Brassica rapa HOM05D009961 ORTHO05D008483 4.0e-65 251.9 197 74.1
BraA08t34889Z Brassica rapa HOM05D009961 ORTHO05D008483 5.6e-59 231.5 180 72.8
A08p29520 Brassica napus HOM05D009961 ORTHO05D008483 9.2e-54 214.2 197 65.5
Aa31LG7G4510 Aethionema arabicum HOM05D009961 ORTHO05D008483 5.1e-52 208.4 223 61.0
BcaC05g25906 Brassica carinata HOM05D009961 ORTHO05D008483 6.2e-26 121.7 88 85.2
THA.LOC104811421 Tarenaya hassleriana HOM05D009961 ORTHO05D008483 9.0e-25 117.9 196 46.4
Cpa.g.sc26.305 Carica papaya HOM05D007731 ORTHO05D008483 1.8e-09 67.0 232 32.3
TWI12G0892 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 1.8e-09 67.0 137 34.3
CSS0037397 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 4.1e-09 65.9 210 31.9
TAR628G0423 Trochodendron aralioides HOM05D007731 ORTHO05D008483 2.0e-08 63.5 235 29.4
Rhsim06G0019700 Rhododendron simsii HOM05D007731 ORTHO05D008483 5.9e-08 62.0 91 40.7
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 7.7e-08 61.6 54 50.0
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 1.0e-07 61.2 48 60.4
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 1.0e-07 61.2 169 31.4
MSTRG.25262 Avicennia marina HOM05D007731 ORTHO05D008483 1.7e-07 60.5 240 29.2
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.7e-07 60.5 53 56.6
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.7e-07 60.5 53 56.6
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 1.7e-07 60.5 251 30.7
Gorai.009G193400 Gossypium raimondii HOM05D007731 ORTHO05D008483 1.7e-07 60.5 169 32.0
arahy.Tifrunner.gnm1.ann1.3IU0NQ Arachis hypogaea HOM05D007731 ORTHO05D008483 2.2e-07 60.1 144 33.3
Gohir.D02G098500 Gossypium hirsutum HOM05D007731 ORTHO05D008483 2.9e-07 59.7 223 31.4
CANSAT25G3722 Cannabis sativa HOM05D007731 ORTHO05D008483 3.8e-07 59.3 170 31.2
Phvul.009G009600 Phaseolus vulgaris HOM05D007731 ORTHO05D008483 5.0e-07 58.9 143 33.6
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 8.5e-07 58.2 48 58.3
Manes.05G145300 Manihot esculenta HOM05D007731 ORTHO05D008483 8.5e-07 58.2 257 29.6
CSS0031900 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.1e-06 57.8 206 30.1
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 1.1e-06 57.8 48 58.3
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.4e-06 57.4 169 31.4
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.4e-06 57.4 169 31.4
Gorai.005G112400 Gossypium raimondii HOM05D007731 ORTHO05D008483 1.4e-06 57.4 222 30.6
Lj4P799T27 Lonicera japonica HOM05D007731 ORTHO05D008483 1.4e-06 57.4 56 51.8
Sopen04g035340 Solanum pennellii HOM05D007731 ORTHO05D008483 1.4e-06 57.4 46 63.0
PGSC0003DMG400009876 Solanum tuberosum HOM05D007731 ORTHO05D008483 1.4e-06 57.4 46 63.0
TWI56G0526 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 1.4e-06 57.4 59 50.8
Aqoxy6G02285 Aquilegia oxysepala HOM05D007731 ORTHO05D008483 1.9e-06 57.0 85 40.0
Ca_15482_v3 Cicer arietinum L. HOM05D007731 ORTHO05D008483 1.9e-06 57.0 64 51.6
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 1.9e-06 57.0 226 30.1
ECA233G0921 Erigeron canadensis HOM05D007731 ORTHO05D008483 1.9e-06 57.0 187 32.1
Gohir.A02G083100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.9e-06 57.0 219 35.6
Lsat_1_v5_gn_8_30081 Lactuca sativa HOM05D007731 ORTHO05D008483 1.9e-06 57.0 58 50.0
Psat0s2878g0040 Pisum sativum HOM05D007731 ORTHO05D008483 1.9e-06 57.0 198 29.3
arahy.Tifrunner.gnm1.ann1.WY2XWP Arachis hypogaea HOM05D007731 ORTHO05D008483 2.5e-06 56.6 207 28.5
Nn5g30769 Nelumbo nucifera HOM05D007731 ORTHO05D008483 2.5e-06 56.6 49 55.1
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 2.5e-06 56.6 253 30.0
FvH4_2g38210 Fragaria vesca HOM05D007731 ORTHO05D008483 3.2e-06 56.2 58 53.4
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 3.2e-06 56.2 228 30.7
Gorai.002G122700 Gossypium raimondii HOM05D007731 ORTHO05D008483 4.2e-06 55.8 59 52.5
Rhsim06G0016400 Rhododendron simsii HOM05D007731 ORTHO05D008483 5.5e-06 55.5 217 30.4
PGR031G1853 Punica granatum HOM05D007731 ORTHO05D008483 7.2e-06 55.1 225 28.9
FAN15G0282 Fragaria x ananassa HOM05D007731 ORTHO05D008483 9.4e-06 54.7 58 51.7
FAN27G0472 Fragaria x ananassa HOM05D007731 ORTHO05D008483 9.4e-06 54.7 58 51.7
Potri.005G241800 Populus trichocarpa HOM05D007731 ORTHO05D008483 9.4e-06 54.7 56 53.6
Sabra05G0187200 Salix brachista HOM05D007731 ORTHO05D008483 9.4e-06 54.7 56 53.6


User provided reference genes

Program Settings