Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 2.5e-77 292.0 143 100.0
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 4.5e-58 228.0 143 80.4
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 4.5e-58 228.0 143 80.4
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 5.0e-57 224.6 143 79.7
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 5.0e-57 224.6 143 79.7
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 7.2e-56 220.7 143 79.0
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 4.8e-52 208.0 144 78.5
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 1.0e-49 200.3 145 73.8
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 2.1e-47 192.6 147 72.8
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 1.2e-37 160.2 126 72.2
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 2.0e-37 159.5 98 83.7
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 3.0e-30 135.6 99 74.7
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 2.2e-20 102.8 79 73.4
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 1.1e-19 100.5 102 54.9
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 3.0e-17 92.4 100 57.0
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 3.0e-17 92.4 100 57.0
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 5.0e-17 91.7 144 42.4
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 6.6e-17 91.3 100 56.0
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 6.6e-17 91.3 78 59.0
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 1.1e-16 90.5 102 55.9
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.5e-16 90.1 78 57.7
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 1.9e-16 89.7 93 54.8
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 1.9e-16 89.7 112 47.3
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 1.9e-16 89.7 93 55.9
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.5e-16 89.4 80 58.8
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 4.3e-16 88.6 117 44.4
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 5.6e-16 88.2 92 53.3
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 9.5e-16 87.4 103 55.3
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 1.2e-15 87.0 100 54.0
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 1.2e-15 87.0 100 54.0
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 2.8e-15 85.9 98 54.1
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 3.6e-15 85.5 92 53.3
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 4.7e-15 85.1 82 56.1
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 4.7e-15 85.1 90 53.3
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 4.7e-15 85.1 121 47.1
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 4.7e-15 85.1 76 61.8
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 4.7e-15 85.1 130 46.2
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 4.7e-15 85.1 91 50.5
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 6.2e-15 84.7 84 56.0
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 6.2e-15 84.7 84 56.0
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 8.1e-15 84.3 79 58.2
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 1.1e-14 84.0 100 52.0
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.1e-14 84.0 84 56.0
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 1.1e-14 84.0 89 53.9
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.8e-14 83.2 82 54.9
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 1.8e-14 83.2 102 54.9
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 1.8e-14 83.2 89 52.8
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 2.3e-14 82.8 80 56.2
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 2.3e-14 82.8 80 56.2
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 3.1e-14 82.4 100 53.0
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 6.8e-14 81.3 100 53.0
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 6.8e-14 81.3 100 53.0
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 6.8e-14 81.3 91 47.3
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 8.9e-14 80.9 77 64.9
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 8.9e-14 80.9 91 48.4
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 8.9e-14 80.9 91 48.4
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 1.5e-13 80.1 127 44.1
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 2.0e-13 79.7 92 50.0
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 2.6e-13 79.3 89 53.9
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 2.6e-13 79.3 81 56.8
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 4.4e-13 78.6 93 48.4
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 4.4e-13 78.6 93 48.4
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 5.8e-13 78.2 79 55.7
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 5.8e-13 78.2 114 47.4
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 7.5e-13 77.8 77 59.7
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 7.5e-13 77.8 80 57.5
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 9.9e-13 77.4 78 56.4
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 9.9e-13 77.4 93 47.3
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 1.3e-12 77.0 82 54.9
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 1.3e-12 77.0 119 38.7
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 1.7e-12 76.6 98 46.9
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 1.7e-12 76.6 85 52.9
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.7e-12 76.6 91 50.5
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 1.7e-12 76.6 92 45.7
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.9e-12 75.9 91 50.5
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 2.9e-12 75.9 92 47.8
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 3.7e-12 75.5 117 42.7
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 3.7e-12 75.5 92 47.8
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 4.9e-12 75.1 91 50.5
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 4.9e-12 75.1 82 52.4
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 1.1e-11 73.9 113 43.4
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 1.9e-11 73.2 105 43.8
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 1.9e-11 73.2 83 48.2
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 1.9e-11 73.2 111 41.4
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 3.2e-11 72.4 126 39.7
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 3.2e-11 72.4 113 42.5
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 7.1e-11 71.2 97 50.5
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 9.2e-11 70.9 112 42.0
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 9.2e-11 70.9 125 38.4
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 9.2e-11 70.9 78 51.3
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 1.2e-10 70.5 96 43.8
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 1.2e-10 70.5 119 41.2
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 1.2e-10 70.5 78 53.8
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 1.6e-10 70.1 94 46.8
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 3.5e-10 68.9 75 48.0
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.3e-09 67.0 124 37.1
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 1.7e-09 66.6 122 38.5
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 3.0e-09 65.9 81 48.1
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 5.1e-09 65.1 98 43.9
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 6.6e-09 64.7 79 49.4
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 1.5e-08 63.5 84 45.2
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 2.5e-08 62.8 77 49.4


User provided reference genes

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