Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g17360 Schrenkiella parvula HOM05D004666 ORTHO05D005822 0.0e+00 1679.5 830 100.0
A08p29790 Brassica napus HOM05D004666 ORTHO05D005822 0.0e+00 1443.7 839 86.2
BraA08t34913Z Brassica rapa HOM05D004666 ORTHO05D005822 0.0e+00 1437.9 838 85.9
BolC8t49572H Brassica oleracea HOM05D004666 ORTHO05D005822 0.0e+00 1407.1 837 84.2
C08p19490 Brassica napus HOM05D004666 ORTHO05D005822 0.0e+00 1382.9 836 83.3
Thhalv10006802m.g Eutrema salsugineum HOM05D004666 ORTHO05D005822 0.0e+00 1375.1 839 82.8
BolC5t30496H Brassica oleracea HOM05D004666 ORTHO05D005822 0.0e+00 1368.6 835 82.3
BcaB03g12912 Brassica carinata HOM05D004666 ORTHO05D005822 0.0e+00 1353.2 837 81.8
C05p17890 Brassica napus HOM05D004666 ORTHO05D005822 0.0e+00 1351.7 834 81.8
A06p15660 Brassica napus HOM05D004666 ORTHO05D005822 0.0e+00 1335.9 836 80.7
BraA06t24675Z Brassica rapa HOM05D004666 ORTHO05D005822 0.0e+00 1335.9 836 80.7
CARHR020050 Cardamine hirsuta HOM05D004666 ORTHO05D005822 0.0e+00 1325.5 835 80.5
AT1G19485 Arabidopsis thaliana HOM05D004666 ORTHO05D005822 0.0e+00 1323.5 825 80.7
Carub.0001s1905 Capsella rubella HOM05D004666 ORTHO05D005822 0.0e+00 1316.6 835 79.6
AL1G32230 Arabidopsis lyrata HOM05D004666 ORTHO05D005822 0.0e+00 1193.7 712 84.0
Aa31LG7G4140 Aethionema arabicum HOM05D004666 ORTHO05D005822 0.0e+00 1184.9 849 71.1
THA.LOC104827512 Tarenaya hassleriana HOM05D004666 ORTHO05D005822 2.6e-291 1005.4 850 61.6
Dinv21227 Davidia involucrata HOM05D004666 ORTHO05D005822 3.5e-227 792.3 872 49.8
CiPaw.09G011000 Carya illinoinensis HOM05D004666 ORTHO05D005822 5.2e-223 778.5 863 51.4
Cfa002067 Carpinus fangiana HOM05D004666 ORTHO05D005822 9.8e-222 774.2 873 50.9
QL07p039593 Quercus lobata HOM05D004666 ORTHO05D005822 8.3e-221 771.2 880 50.8
Gohir.A07G200500 Gossypium hirsutum HOM05D004666 ORTHO05D005822 3.2e-220 769.2 893 48.6
Gorai.001G233200 Gossypium raimondii HOM05D004666 ORTHO05D005822 1.6e-219 766.9 895 48.4
COL.COLO4_15658 Corchorus olitorius HOM05D004666 ORTHO05D005822 2.0e-219 766.5 1003 44.4
Thecc.01G223300 Theobroma cacao HOM05D004666 ORTHO05D005822 6.0e-219 765.0 873 49.8
Manes.13G012000 Manihot esculenta HOM05D004666 ORTHO05D005822 1.5e-217 760.4 899 49.5
Rhsim05G0022800 Rhododendron simsii HOM05D004666 ORTHO05D005822 2.5e-217 759.6 867 48.7
TAR365G1212 Trochodendron aralioides HOM05D004666 ORTHO05D005822 4.0e-215 752.3 854 49.3
Gohir.D07G206800 Gossypium hirsutum HOM05D004666 ORTHO05D005822 8.9e-215 751.1 894 48.2
Potri.008G200900 Populus trichocarpa HOM05D004666 ORTHO05D005822 8.3e-213 744.6 915 45.2
GSVIVG01032069001 Vitis vinifera HOM05D004666 ORTHO05D005822 2.1e-211 740.0 825 47.2
Oeu040521.1 Olea europaea HOM05D004666 ORTHO05D005822 2.5e-209 733.0 806 50.2
TWI34G1071 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 1.6e-208 730.3 879 47.8
Atru.chr8.1588 Acer truncatum HOM05D004666 ORTHO05D005822 2.4e-204 716.5 747 53.9
Prupe.7G114200 Prunus persica HOM05D004666 ORTHO05D005822 3.0e-202 709.5 993 43.7
vmacro22687 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 2.6e-198 696.4 989 42.0
Aqoxy3G00997 Aquilegia oxysepala HOM05D004666 ORTHO05D005822 1.3e-197 694.1 923 44.0
vmacro17219 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 2.9e-197 693.0 1002 41.9
MELO3C009457.2 Cucumis melo HOM05D004666 ORTHO05D005822 1.9e-196 690.3 877 46.8
CANSAT54G2995 Cannabis sativa HOM05D004666 ORTHO05D005822 5.4e-196 688.7 824 47.7
FvH4_6g18260 Fragaria vesca HOM05D004666 ORTHO05D005822 1.9e-193 680.2 1026 42.2
Sed0022470 Sechium edule HOM05D004666 ORTHO05D005822 1.3e-192 677.6 896 44.3
CsaV3_3G037120 Cucumis sativus L. HOM05D004666 ORTHO05D005822 8.1e-192 674.9 904 43.4
RcHm_v2.0_Chr4g0409331 Rosa chinensis HOM05D004666 ORTHO05D005822 8.1e-192 674.9 1042 40.7
PGR142G0825 Punica granatum HOM05D004666 ORTHO05D005822 1.2e-190 671.0 887 43.4
PSO384G1605 Papaver somniferum HOM05D004666 ORTHO05D005822 3.4e-190 669.5 1055 39.6
EL10Ac7g16949 Beta vulgaris HOM05D004666 ORTHO05D005822 4.4e-190 669.1 951 41.1
Cc06_g05530 Coffea canephora HOM05D004666 ORTHO05D005822 5.4e-188 662.1 891 43.8
Ciclev10011197m.g Citrus clementina HOM05D004666 ORTHO05D005822 1.7e-186 657.1 715 51.6
PSO425G0050 Papaver somniferum HOM05D004666 ORTHO05D005822 3.0e-186 656.4 1057 39.5
DCAR_013376 Daucus carota HOM05D004666 ORTHO05D005822 1.9e-185 653.7 896 41.3
ClCG10G019140 Citrullus lanatus HOM05D004666 ORTHO05D005822 2.1e-184 650.2 868 45.2
Medtr1g060580 Medicago truncatula HOM05D004666 ORTHO05D005822 2.1e-184 650.2 909 43.6
Lsat_1_v5_gn_1_48480 Lactuca sativa HOM05D004666 ORTHO05D005822 1.4e-183 647.5 823 44.6
TWI73G1120 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 4.0e-183 646.0 881 44.3
arahy.Tifrunner.gnm1.ann1.WFL2XE Arachis hypogaea HOM05D004666 ORTHO05D005822 2.0e-182 643.7 884 42.6
Psat6g082920 Pisum sativum HOM05D004666 ORTHO05D005822 2.6e-182 643.3 913 42.2
HanXRQChr01g0029141 Helianthus annuus HOM05D004666 ORTHO05D005822 4.5e-182 642.5 861 44.4
arahy.Tifrunner.gnm1.ann1.G8H5C8 Arachis hypogaea HOM05D004666 ORTHO05D005822 7.6e-182 641.7 913 42.3
Lalb_Chr02g0155381 Lupinus albus HOM05D004666 ORTHO05D005822 1.9e-180 637.1 1009 39.0
FvH4_7g02500 Fragaria vesca HOM05D004666 ORTHO05D005822 4.2e-180 636.0 1015 40.6
arahy.Tifrunner.gnm1.ann1.T4KAXF Arachis hypogaea HOM05D004666 ORTHO05D005822 9.3e-180 634.8 911 41.8
MD09G1081300 Malus domestica HOM05D004666 ORTHO05D005822 3.3e-177 626.3 965 40.9
TPR.G35431 Trifolium pratense HOM05D004666 ORTHO05D005822 1.6e-176 624.0 937 40.9
Ca_26672_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 2.8e-176 623.2 918 41.4
Ca_30723_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 2.8e-176 623.2 918 41.4
Migut.J00966 Erythranthe guttata HOM05D004666 ORTHO05D005822 3.1e-175 619.8 836 44.0
Glyma.10G068100 Glycine max HOM05D004666 ORTHO05D005822 3.1e-175 619.8 1058 39.0
MD12G1022600 Malus domestica HOM05D004666 ORTHO05D005822 3.1e-175 619.8 943 42.0
Lj5g0013478 Lotus japonicus HOM05D004666 ORTHO05D005822 1.7e-173 614.0 1000 37.3
Phvul.011G176600 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 3.8e-173 612.8 1035 37.5
Sed0014063 Sechium edule HOM05D004666 ORTHO05D005822 3.8e-173 612.8 1037 38.5
Nitab4.5_0000794g0050 Nicotiana tabacum HOM05D004666 ORTHO05D005822 8.4e-173 611.7 883 42.7
Phvul.007G229800 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 1.1e-172 611.3 1043 38.7
AUR62033523 Chenopodium quinoa HOM05D004666 ORTHO05D005822 1.6e-171 607.4 973 38.0
Hund26220 Selenicereus undatus HOM05D004666 ORTHO05D005822 2.1e-171 607.1 1079 35.9
FAN06G2408 Fragaria x ananassa HOM05D004666 ORTHO05D005822 2.1e-168 597.0 1025 39.3
SGA_v2.0_scaffold147G36363 Striga asiatica HOM05D004666 ORTHO05D005822 1.5e-166 590.9 835 43.5
arahy.Tifrunner.gnm1.ann1.LSN657 Arachis hypogaea HOM05D004666 ORTHO05D005822 7.6e-166 588.6 887 41.1
Solyc09g009710.4 Solanum lycopersicum HOM05D004666 ORTHO05D005822 2.2e-165 587.0 887 39.8
Sopen09g004490 Solanum pennellii HOM05D004666 ORTHO05D005822 3.8e-165 586.3 884 39.8
MBI17_g35786_MAGBIO Magnolia biondii HOM05D004666 ORTHO05D005822 1.1e-164 584.7 808 42.8
Lj2C133G10 Lonicera japonica HOM05D004666 ORTHO05D005822 4.2e-164 582.8 1009 38.7
ECA248G3102 Erigeron canadensis HOM05D004666 ORTHO05D005822 3.5e-163 579.7 1059 35.8
Ah.08g210700 Amaranthus hybridus HOM05D004666 ORTHO05D005822 9.7e-161 571.6 1007 36.3
Duzib114G0569 Durio zibethinus HOM05D004666 ORTHO05D005822 1.8e-159 567.4 839 44.1
VMungo0720G2175 Vigna mungo HOM05D004666 ORTHO05D005822 1.2e-158 564.7 1122 35.2
FAN03G3209 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.5e-158 564.3 1071 37.1
Peaxi162Scf00015g00639 Petunia axillaris HOM05D004666 ORTHO05D005822 5.9e-158 562.4 918 38.8
SalBow3G3865 Salvia bowleyana HOM05D004666 ORTHO05D005822 7.7e-158 562.0 855 40.6
Lj5g0018797 Lotus japonicus HOM05D004666 ORTHO05D005822 2.2e-157 560.5 892 39.2
Nitab4.5_0009916g0020 Nicotiana tabacum HOM05D004666 ORTHO05D005822 7.2e-156 555.4 901 40.5
RcHm_v2.0_Chr3g0472691 Rosa chinensis HOM05D004666 ORTHO05D005822 1.1e-153 548.1 500 56.4
FAN02G3237 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.3e-152 544.7 804 42.5
Nn2g14084 Nelumbo nucifera HOM05D004666 ORTHO05D005822 2.6e-150 537.0 619 46.7
ECA248G2596 Erigeron canadensis HOM05D004666 ORTHO05D005822 4.5e-150 536.2 1076 34.6
Haze_19573 Corylus avellana HOM05D004666 ORTHO05D005822 4.5e-142 509.6 734 44.6
Sc02g0001000 Simmondsia chinensis HOM05D004666 ORTHO05D005822 1.7e-141 507.7 987 35.4
CDE08G1659 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 3.3e-137 493.4 812 36.5
HPP92_015079 Vanilla planifolia HOM05D004666 ORTHO05D005822 3.3e-137 493.4 1182 30.6
Potri.006G036601 Populus trichocarpa HOM05D004666 ORTHO05D005822 9.7e-137 491.9 657 44.1
unitig_749.g14294 Utricularia gibba HOM05D004666 ORTHO05D005822 5.5e-132 476.1 814 37.5
FAN05G5602 Fragaria x ananassa HOM05D004666 ORTHO05D005822 5.2e-130 469.5 808 38.5
Peaxi162Scf00036g00125 Petunia axillaris HOM05D004666 ORTHO05D005822 1.0e-125 455.3 929 35.3
Sabra08G0160300 Salix brachista HOM05D004666 ORTHO05D005822 8.3e-120 435.6 636 41.4
Sabra12G0045300 Salix brachista HOM05D004666 ORTHO05D005822 3.6e-115 420.2 673 39.7
AUR62028568 Chenopodium quinoa HOM05D004666 ORTHO05D005822 9.8e-113 412.1 675 39.1
Zm00001eb147330 Zea mays HOM05D004666 ORTHO05D005822 1.8e-111 407.9 496 42.5
Eucgr.K02035 Eucalyptus grandis HOM05D004666 ORTHO05D005822 2.8e-107 394.0 360 54.2
Os01g0858000 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 8.3e-104 382.5 478 43.5
Cpa.g.sc5.49 Carica papaya HOM05D004666 ORTHO05D005822 2.3e-101 374.4 314 60.5
Pp3c1_31470 Physcomitrium patens HOM05D004666 ORTHO05D005822 1.6e-99 368.2 738 33.3
Mapoly0021s0027 Marchantia polymorpha HOM05D004666 ORTHO05D005822 2.0e-97 361.3 789 32.1
AagrBONN_evm.TU.Sc2ySwM_344.3422 Anthoceros agrestis HOM05D004666 ORTHO05D005822 1.3e-96 358.6 809 32.9
Hma1.2p1_2087F.1_g313760 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 5.8e-73 280.0 294 50.3
PGSC0003DMG400008959 Solanum tuberosum HOM05D004666 ORTHO05D005822 3.8e-72 277.3 535 35.1
Cpa.g.c36918 Carica papaya HOM05D004666 ORTHO05D005822 9.3e-55 219.5 348 41.4
ATR0820G266 Amborella trichopoda HOM05D004666 ORTHO05D005822 6.0e-54 216.9 287 43.2
CBR_g38478 Chara braunii HOM05D004666 ORTHO05D005822 1.3e-53 215.7 670 30.0
Haze_16425 Corylus avellana HOM05D004666 ORTHO05D005822 2.4e-50 204.9 283 44.2
ATR0820G291 Amborella trichopoda HOM05D004666 ORTHO05D005822 2.6e-49 201.4 342 34.2
Rhsim09G0020300 Rhododendron simsii HOM05D004666 ORTHO05D005822 2.6e-49 201.4 446 34.1
FAN09G1276 Fragaria x ananassa HOM05D004666 ORTHO05D005822 2.2e-48 198.4 229 49.3
RcHm_v2.0_Chr3g0472701 Rosa chinensis HOM05D004666 ORTHO05D005822 5.5e-47 193.7 238 46.2
FAN05G4874 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.3e-45 189.1 291 45.0
SEGI_09998 Sequoiadendron giganteum HOM05D004666 ORTHO05D005822 1.8e-45 188.7 131 64.1
Hma1.2p1_0084F.1_g043480 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 3.2e-39 167.9 211 47.9
RhsimUnG0189100 Rhododendron simsii HOM05D004666 ORTHO05D005822 6.1e-38 163.7 210 45.7
Hma1.2p1_2087F.1_g313780 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 5.3e-34 150.6 218 40.8
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 2.6e-33 148.3 175 41.7
QL03p004438 Quercus lobata HOM05D004666 ORTHO05D005822 1.7e-32 145.6 103 62.1
Hma1.2p1_0084F.1_g043500 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 4.7e-30 137.5 341 31.1
FAN14G5421 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.0e-29 136.3 235 39.6
SHI23868 Sapria himalayana HOM05D004666 ORTHO05D005822 1.8e-29 135.6 208 42.3
SEGI_32780 Sequoiadendron giganteum HOM05D004666 ORTHO05D005822 2.0e-28 132.1 218 41.3
Eucgr.L02043 Eucalyptus grandis HOM05D004666 ORTHO05D005822 5.7e-28 130.6 216 38.4
Hma1.2p1_0084F.1_g043490 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 4.5e-25 120.9 106 55.7
QL03p004414 Quercus lobata HOM05D004666 ORTHO05D005822 5.9e-25 120.6 319 31.7
CDE08G0815 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 1.5e-23 115.9 189 37.6
Sabra06G0024800 Salix brachista HOM05D004666 ORTHO05D005822 2.3e-21 108.6 198 37.9
FAN10G4251 Fragaria x ananassa HOM05D004666 ORTHO05D005822 4.1e-18 97.8 532 24.2
CSS0049785 Camellia sinensis var. sinensis HOM05D004666 ORTHO05D005822 1.6e-17 95.9 115 48.7
arahy.Tifrunner.gnm1.ann1.AE8L4W Arachis hypogaea HOM05D004666 ORTHO05D005822 4.2e-15 87.8 97 46.4
Os02g0307300 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 3.6e-14 84.7 184 33.7
Haze_16424 Corylus avellana HOM05D004666 ORTHO05D005822 2.0e-12 79.0 156 35.3
QL04p079053 Quercus lobata HOM05D004666 ORTHO05D005822 3.7e-11 74.7 151 32.5
Os07g0454400 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 8.3e-11 73.6 104 41.3
RcHm_v2.0_Chr7g0223981 Rosa chinensis HOM05D004666 ORTHO05D005822 2.9e-08 65.1 51 54.9
Sabra16G0037300 Salix brachista HOM05D004666 ORTHO05D017783 1.2e-06 59.7 40 70.0


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