Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g15290 Schrenkiella parvula HOM05D004022 ORTHO05D004090 2.4e-50 201.8 98 100.0
BcaB07g34047 Brassica carinata HOM05D004022 ORTHO05D004090 2.8e-43 178.3 98 87.8
C05p15530 Brassica napus HOM05D004022 ORTHO05D004090 4.8e-43 177.6 98 86.7
BcaC05g25663 Brassica carinata HOM05D004022 ORTHO05D004090 1.1e-42 176.4 98 85.7
BolC5t30263H Brassica oleracea HOM05D004022 ORTHO05D004090 5.3e-42 174.1 98 84.7
A08p31100 Brassica napus HOM05D004022 ORTHO05D004090 9.0e-42 173.3 98 86.7
BraA08t35036Z Brassica rapa HOM05D004022 ORTHO05D004090 9.0e-42 173.3 98 86.7
BcaC07g38833 Brassica carinata HOM05D004022 ORTHO05D004090 1.2e-41 172.9 98 85.7
C08p17730 Brassica napus HOM05D004022 ORTHO05D004090 1.2e-41 172.9 98 85.7
BraA06t24464Z Brassica rapa HOM05D004022 ORTHO05D004090 1.7e-40 169.1 99 83.8
A06p13050 Brassica napus HOM05D004022 ORTHO05D004090 2.2e-40 168.7 99 83.8
AL1G29370 Arabidopsis lyrata HOM05D004022 ORTHO05D004090 6.5e-40 167.2 95 84.2
CARHR017720 Cardamine hirsuta HOM05D004022 ORTHO05D004090 6.5e-40 167.2 98 83.7
AT1G17147 Arabidopsis thaliana HOM05D004022 ORTHO05D004090 8.5e-40 166.8 93 86.0
Carub.0001s1689 Capsella rubella HOM05D004022 ORTHO05D004090 2.3e-37 158.7 98 77.6
BolC8t49399H Brassica oleracea HOM05D004022 ORTHO05D004090 3.9e-37 157.9 90 84.4
Thhalv10009187m.g Eutrema salsugineum HOM05D004022 ORTHO05D004090 3.3e-36 154.8 93 79.6
BcaB03g13015 Brassica carinata HOM05D004022 ORTHO05D004090 2.4e-34 148.7 90 82.2
BraA07t31879Z Brassica rapa HOM05D004022 ORTHO05D004090 5.0e-24 114.4 105 59.0
BcaC08g47415 Brassica carinata HOM05D004022 ORTHO05D004090 1.5e-23 112.8 105 59.0
AL2G38780 Arabidopsis lyrata HOM05D004022 ORTHO05D004090 2.5e-23 112.1 106 57.5
A07p43670 Brassica napus HOM05D004022 ORTHO05D004090 3.2e-23 111.7 105 57.1
Aa31LG7G1990 Aethionema arabicum HOM05D004022 ORTHO05D004090 1.2e-22 109.8 98 59.2
BolC6t40255H Brassica oleracea HOM05D004022 ORTHO05D004090 1.2e-22 109.8 105 58.1
A07p27550 Brassica napus HOM05D004022 ORTHO05D004090 2.7e-22 108.6 104 56.7
BraA07t30397Z Brassica rapa HOM05D004022 ORTHO05D004090 2.7e-22 108.6 104 56.7
Sp5g33510 Schrenkiella parvula HOM05D004022 ORTHO05D004090 2.7e-22 108.6 105 55.2
BcaB05g25138 Brassica carinata HOM05D004022 ORTHO05D004090 3.6e-22 108.2 105 55.2
C02p35580 Brassica napus HOM05D004022 ORTHO05D004090 3.6e-22 108.2 103 56.3
Thhalv10019550m.g Eutrema salsugineum HOM05D004022 ORTHO05D004090 3.6e-22 108.2 104 55.8
BcaC03g15811 Brassica carinata HOM05D004022 ORTHO05D004090 4.7e-22 107.8 103 56.3
A02p22170 Brassica napus HOM05D004022 ORTHO05D004090 4.7e-22 107.8 103 56.3
BraA02t07221Z Brassica rapa HOM05D004022 ORTHO05D004090 4.7e-22 107.8 103 56.3
BcaC08g45417 Brassica carinata HOM05D004022 ORTHO05D004090 6.1e-22 107.5 103 57.3
C06p30490 Brassica napus HOM05D004022 ORTHO05D004090 6.1e-22 107.5 103 57.3
BolC6t38212H Brassica oleracea HOM05D004022 ORTHO05D004090 6.1e-22 107.5 103 57.3
BcaB02g07170 Brassica carinata HOM05D004022 ORTHO05D004090 8.0e-22 107.1 98 58.2
BcaB03g16016 Brassica carinata HOM05D004022 ORTHO05D004090 2.3e-21 105.5 101 56.4
Carub.0002s2531 Capsella rubella HOM05D004022 ORTHO05D004090 3.0e-21 105.1 107 54.2
AT1G78410 Arabidopsis thaliana HOM05D004022 ORTHO05D004090 6.7e-21 104.0 103 55.3
BolC2t09573H Brassica oleracea HOM05D004022 ORTHO05D004090 9.7e-20 100.1 102 53.9
THA.LOC104813977 Tarenaya hassleriana HOM05D004022 ORTHO05D004090 4.8e-19 97.8 94 55.3
CARHR071930 Cardamine hirsuta HOM05D004022 ORTHO05D004090 1.1e-15 86.7 113 45.1
THA.LOC104812289 Tarenaya hassleriana HOM05D004022 ORTHO05D004090 1.2e-14 83.2 97 49.5
Aa31LG4G2550 Aethionema arabicum HOM05D004022 ORTHO05D004090 3.4e-12 75.1 101 44.6
C06p52350 Brassica napus HOM05D004022 ORTHO05D004090 4.4e-12 74.7 72 56.9
CAN.G1003.7 Capsicum annuum HOM05D004022 ORTHO05D004090 4.8e-11 71.2 92 42.4
PGR083G0572 Punica granatum HOM05D004022 ORTHO05D004090 4.8e-11 71.2 86 45.3
Duzib213G0178 Durio zibethinus HOM05D004022 ORTHO05D004090 7.0e-10 67.4 96 40.6
Actinidia35177 Actinidia chinensis HOM05D004022 ORTHO05D004090 9.1e-10 67.0 88 43.2
Solyc07g056600.1 Solanum lycopersicum HOM05D004022 ORTHO05D004090 2.0e-09 65.9 101 41.6
CSS0009778 Camellia sinensis var. sinensis HOM05D004022 ORTHO05D004090 2.7e-09 65.5 97 43.3
QL04p070436 Quercus lobata HOM05D004022 ORTHO05D004090 2.7e-09 65.5 95 42.1
Sopen07g029950 Solanum pennellii HOM05D004022 ORTHO05D004090 2.7e-09 65.5 101 41.6
QL04p070411 Quercus lobata HOM05D004022 ORTHO05D004090 3.5e-09 65.1 95 44.2
Thecc.07G146700 Theobroma cacao HOM05D004022 ORTHO05D004090 3.5e-09 65.1 100 43.0
Peaxi162Scf00111g00083 Petunia axillaris HOM05D004022 ORTHO05D004090 7.7e-09 63.9 104 38.5
Gohir.D01G029300 Gossypium hirsutum HOM05D004022 ORTHO05D004090 2.9e-08 62.0 99 38.4
Gorai.002G038600 Gossypium raimondii HOM05D004022 ORTHO05D004090 2.9e-08 62.0 99 38.4
Lalb_Chr25g0285381 Lupinus albus HOM05D004022 ORTHO05D004090 2.9e-08 62.0 97 41.2
Nitab4.5_0005080g0020 Nicotiana tabacum HOM05D004022 ORTHO05D004090 2.9e-08 62.0 104 36.5
Rhsim06G0184700 Rhododendron simsii HOM05D004022 ORTHO05D004090 2.9e-08 62.0 88 40.9
TPR.G2234 Trifolium pratense HOM05D004022 ORTHO05D004090 2.9e-08 62.0 90 40.0
Migut.M00652 Erythranthe guttata HOM05D004022 ORTHO05D004090 3.8e-08 61.6 89 39.3
QL04p070376 Quercus lobata HOM05D004022 ORTHO05D004090 3.8e-08 61.6 95 41.1
Sc03g0007740 Simmondsia chinensis HOM05D004022 ORTHO05D004090 3.8e-08 61.6 84 41.7
Haze_08493 Corylus avellana HOM05D004022 ORTHO05D004090 5.0e-08 61.2 88 39.8
Phvul.005G051400 Phaseolus vulgaris HOM05D004022 ORTHO05D004090 5.0e-08 61.2 83 42.2
PGSC0003DMG400027649 Solanum tuberosum HOM05D004022 ORTHO05D004090 5.0e-08 61.2 100 39.0
COL.COLO4_31065 Corchorus olitorius HOM05D004022 ORTHO05D004090 6.5e-08 60.8 110 36.4
AUR62012877 Chenopodium quinoa HOM05D004022 ORTHO05D004090 1.1e-07 60.1 89 39.3
Migut.M00647 Erythranthe guttata HOM05D004022 ORTHO05D004090 1.1e-07 60.1 102 34.3
Eucgr.F01408 Eucalyptus grandis HOM05D004022 ORTHO05D004090 1.1e-07 60.1 98 37.8
Nitab4.5_0001924g0010 Nicotiana tabacum HOM05D004022 ORTHO05D004090 1.1e-07 60.1 108 36.1
Eucgr.F01407 Eucalyptus grandis HOM05D004022 ORTHO05D004090 1.5e-07 59.7 98 38.8
RhsimUnG0204300 Rhododendron simsii HOM05D004022 ORTHO05D004090 1.9e-07 59.3 44 56.8
SalBow8G0217 Salvia bowleyana HOM05D004022 ORTHO05D004090 1.9e-07 59.3 89 38.2
TAR627G0510 Trochodendron aralioides HOM05D004022 ORTHO05D004090 1.9e-07 59.3 98 39.8
unitig_899.g15299 Utricularia gibba HOM05D004022 ORTHO05D004090 1.9e-07 59.3 89 37.1
Sabra16G0249100 Salix brachista HOM05D004022 ORTHO05D004090 3.2e-07 58.5 104 38.5
CSS0036966 Camellia sinensis var. sinensis HOM05D004022 ORTHO05D004090 4.2e-07 58.2 107 34.6
Cpa.g.sc2579.1 Carica papaya HOM05D004022 ORTHO05D004090 4.2e-07 58.2 96 42.7
Duzib268G0389 Durio zibethinus HOM05D004022 ORTHO05D004090 4.2e-07 58.2 98 39.8
Glyma.15G249800 Glycine max HOM05D004022 ORTHO05D004090 4.2e-07 58.2 83 38.6
SalBow8G5432 Salvia bowleyana HOM05D004022 ORTHO05D004090 4.2e-07 58.2 89 37.1
CAN.G904.20 Capsicum annuum HOM05D004022 ORTHO05D004090 5.5e-07 57.8 90 34.4
COL.COLO4_17416 Corchorus olitorius HOM05D004022 ORTHO05D004090 5.5e-07 57.8 36 72.2
Nn3g20789 Nelumbo nucifera HOM05D004022 ORTHO05D004090 7.2e-07 57.4 102 37.3
Nn3g20790 Nelumbo nucifera HOM05D004022 ORTHO05D004090 7.2e-07 57.4 102 37.3
MELO3C016156.2 Cucumis melo HOM05D004022 ORTHO05D004090 9.4e-07 57.0 81 44.4
Potri.011G095900 Populus trichocarpa HOM05D004022 ORTHO05D004090 9.4e-07 57.0 109 34.9
EL10Ac9g22063 Beta vulgaris HOM05D004022 ORTHO05D004090 1.2e-06 56.6 47 57.4
TPR.G26630 Trifolium pratense HOM05D004022 ORTHO05D004090 1.2e-06 56.6 90 37.8
CSS0046120 Camellia sinensis var. sinensis HOM05D004022 ORTHO05D004090 2.7e-06 55.5 90 40.0
DCAR_021057 Daucus carota HOM05D004022 ORTHO05D004090 2.7e-06 55.5 83 39.8
Duzib192G0777 Durio zibethinus HOM05D004022 ORTHO05D004090 2.7e-06 55.5 119 35.3
ECA236G3547 Erigeron canadensis HOM05D004022 ORTHO05D004090 2.7e-06 55.5 96 34.4
QL05p057789 Quercus lobata HOM05D004022 ORTHO05D004090 2.7e-06 55.5 111 34.2
Cfa019453 Carpinus fangiana HOM05D004022 ORTHO05D004090 3.6e-06 55.1 90 40.0
Ca_03390_v3 Cicer arietinum L. HOM05D004022 ORTHO05D004090 3.6e-06 55.1 94 37.2
Migut.M00648 Erythranthe guttata HOM05D004022 ORTHO05D004090 3.6e-06 55.1 104 33.7
Atru.chr10.1218 Acer truncatum HOM05D004022 ORTHO05D004090 4.7e-06 54.7 107 34.6
Glyma.08G176500 Glycine max HOM05D004022 ORTHO05D004090 4.7e-06 54.7 92 35.9
Lsat_1_v5_gn_7_101361 Lactuca sativa HOM05D004022 ORTHO05D004090 4.7e-06 54.7 102 37.3
Nitab4.5_0000505g0120 Nicotiana tabacum HOM05D004022 ORTHO05D004090 6.1e-06 54.3 51 56.9
Potri.001G378300 Populus trichocarpa HOM05D004022 ORTHO05D004090 6.1e-06 54.3 113 33.6
Thecc.06G149800 Theobroma cacao HOM05D004022 ORTHO05D004090 6.1e-06 54.3 103 37.9
ClCG07G010500 Citrullus lanatus HOM05D004022 ORTHO05D004090 8.0e-06 53.9 85 44.7
ClCG07G010510 Citrullus lanatus HOM05D004022 ORTHO05D004090 8.0e-06 53.9 85 44.7
Duzib235G0028 Durio zibethinus HOM05D004022 ORTHO05D004090 8.0e-06 53.9 117 35.0


User provided reference genes

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