Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g14880 Schrenkiella parvula HOM05D008842 ORTHO05D010931 1.4e-100 369.8 215 100.0
Thhalv10008754m.g Eutrema salsugineum HOM05D008842 ORTHO05D010931 2.3e-74 282.7 213 83.6
AL1G28900 Arabidopsis lyrata HOM05D008842 ORTHO05D010931 2.7e-70 269.2 212 79.2
Carub.0001s1647 Capsella rubella HOM05D008842 ORTHO05D010931 2.7e-67 259.2 212 75.9
Aa31LG7G1190 Aethionema arabicum HOM05D008842 ORTHO05D010931 6.8e-66 254.6 222 72.5
CARHR017190 Cardamine hirsuta HOM05D008842 ORTHO05D010931 1.2e-65 253.8 218 76.1
AT1G16730 Arabidopsis thaliana HOM05D008842 ORTHO05D010931 1.7e-64 250.0 212 75.9
BcaB03g13035 Brassica carinata HOM05D008842 ORTHO05D010931 3.0e-58 229.2 198 76.3
A08p31310 Brassica napus HOM05D008842 ORTHO05D010931 1.1e-55 220.7 198 74.2
BraA08t35054Z Brassica rapa HOM05D008842 ORTHO05D010931 7.0e-55 218.0 199 72.4
THA.LOC104812345 Tarenaya hassleriana HOM05D008842 ORTHO05D010931 3.7e-40 169.1 194 53.1
BcaC07g38810 Brassica carinata HOM05D008842 ORTHO05D010931 5.4e-39 165.2 110 84.5
Gohir.A05G116600 Gossypium hirsutum HOM05D008842 ORTHO05D010931 2.7e-30 136.3 131 59.5
Gohir.D05G117500 Gossypium hirsutum HOM05D008842 ORTHO05D010931 3.5e-30 136.0 131 58.8
Gorai.009G121400 Gossypium raimondii HOM05D008842 ORTHO05D010931 3.5e-30 136.0 131 58.8
QL05p085140 Quercus lobata HOM05D008842 ORTHO05D010931 7.8e-30 134.8 127 59.1
Thecc.06G049500 Theobroma cacao HOM05D008842 ORTHO05D010931 1.3e-29 134.0 127 59.1
Duzib235G0617 Durio zibethinus HOM05D008842 ORTHO05D010931 6.6e-29 131.7 126 57.9
EL10Ac8g19754 Beta vulgaris HOM05D008842 ORTHO05D010931 6.2e-27 125.2 230 47.8
Ciclev10029553m.g Citrus clementina HOM05D008842 ORTHO05D010931 2.4e-26 123.2 130 54.6
Cfa002161 Carpinus fangiana HOM05D008842 ORTHO05D010931 7.6e-25 118.2 128 53.1
COL.COLO4_26810 Corchorus olitorius HOM05D008842 ORTHO05D010931 6.4e-24 115.2 122 52.5
Haze_16245 Corylus avellana HOM05D008842 ORTHO05D010931 1.6e-22 110.5 128 50.0
GSVIVG01029445001 Vitis vinifera HOM05D008842 ORTHO05D010931 1.0e-21 107.8 195 39.0
CiPaw.01G092500 Carya illinoinensis HOM05D008842 ORTHO05D010931 6.6e-21 105.1 122 50.8
CANSAT01G2106 Cannabis sativa HOM05D008842 ORTHO05D010931 2.8e-19 99.8 111 56.8
ATR0626G313 Amborella trichopoda HOM05D008842 ORTHO05D010931 3.6e-19 99.4 194 38.7
Ah.09g232810 Amaranthus hybridus HOM05D008842 ORTHO05D010931 8.1e-19 98.2 118 48.3
MD04G1031600 Malus domestica HOM05D008842 ORTHO05D010931 1.8e-18 97.1 71 63.4
SEGI_04041 Sequoiadendron giganteum HOM05D008842 ORTHO05D010931 1.5e-17 94.0 140 45.0
SEGI_26270 Sequoiadendron giganteum HOM05D008842 ORTHO05D010931 1.5e-17 94.0 100 49.0
AUR62027592 Chenopodium quinoa HOM05D008842 ORTHO05D010931 2.6e-17 93.2 74 62.2
FAN14G1571 Fragaria x ananassa HOM05D008842 ORTHO05D010931 3.4e-17 92.8 173 40.5
FAN14G3737 Fragaria x ananassa HOM05D008842 ORTHO05D010931 3.4e-17 92.8 173 40.5
C08p17520 Brassica napus HOM05D008842 ORTHO05D010931 2.2e-16 90.1 198 40.9
BolC8t49378H Brassica oleracea HOM05D008842 ORTHO05D010931 2.2e-16 90.1 198 40.9
FvH4_6g36360 Fragaria vesca HOM05D008842 ORTHO05D010931 3.8e-16 89.4 183 43.7
FAN02G3250 Fragaria x ananassa HOM05D008842 ORTHO05D010931 1.2e-14 84.3 157 45.2
FAN09G2833 Fragaria x ananassa HOM05D008842 ORTHO05D010931 4.6e-14 82.4 155 45.2
Sc05g0006440 Simmondsia chinensis HOM05D008842 ORTHO05D010931 4.8e-11 72.4 118 40.7
Potri.007G003700 Populus trichocarpa HOM05D008842 ORTHO05D010931 6.2e-11 72.0 123 39.0


User provided reference genes

Program Settings