Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 3.1e-100 368.6 207 100.0
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 1.1e-89 333.6 207 81.6
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 2.5e-89 332.4 201 83.6
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 5.5e-89 331.3 207 81.2
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 6.1e-88 327.8 205 82.0
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 3.3e-86 322.0 203 80.8
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 1.3e-85 320.1 201 79.6
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 3.7e-85 318.5 201 81.1
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 2.5e-81 305.8 200 77.5
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 2.1e-80 302.8 201 78.1
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 3.0e-79 298.9 214 72.0
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 1.2e-72 276.9 202 69.3
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 1.0e-71 273.9 194 67.5
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 4.4e-70 268.5 199 66.3
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 7.4e-70 267.7 199 65.8
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 1.3e-69 266.9 202 65.8
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 6.3e-69 264.6 201 65.7
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 8.2e-69 264.2 191 66.5
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 5.3e-68 261.5 197 64.0
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 9.1e-68 260.8 203 62.6
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 2.6e-67 259.2 195 65.6
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 3.5e-67 258.8 200 61.5
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 4.5e-67 258.5 193 64.8
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 7.7e-67 257.7 192 63.5
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 7.7e-67 257.7 202 61.4
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 1.0e-66 257.3 204 62.3
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 1.7e-66 256.5 199 63.8
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 2.2e-66 256.1 191 63.4
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 2.9e-66 255.8 194 63.4
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 2.9e-66 255.8 194 62.4
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 5.0e-66 255.0 200 60.0
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 6.5e-66 254.6 208 60.6
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 1.5e-65 253.4 201 61.7
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 9.4e-65 250.8 197 60.4
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 1.2e-64 250.4 202 61.4
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 3.6e-64 248.8 191 62.3
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 3.6e-64 248.8 191 62.3
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 4.7e-64 248.4 194 63.9
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 6.1e-64 248.1 191 61.3
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 1.0e-63 247.3 193 60.6
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 3.0e-63 245.7 215 56.7
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 5.2e-63 245.0 204 57.8
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 5.2e-63 245.0 200 59.0
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 5.2e-63 245.0 200 59.0
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 6.7e-63 244.6 194 61.9
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 6.7e-63 244.6 190 62.1
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 8.8e-63 244.2 192 61.5
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.2e-62 243.8 202 59.4
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 1.2e-62 243.8 191 60.2
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 1.2e-62 243.8 202 59.4
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 1.5e-62 243.4 203 57.6
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 1.5e-62 243.4 191 60.2
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 2.6e-62 242.7 201 58.7
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 4.4e-62 241.9 191 60.7
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 4.4e-62 241.9 192 63.0
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 7.5e-62 241.1 191 60.7
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 9.7e-62 240.7 193 61.1
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 2.2e-61 239.6 192 59.9
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 2.8e-61 239.2 200 59.0
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 6.3e-61 238.0 219 56.2
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 6.3e-61 238.0 157 69.4
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 1.8e-60 236.5 190 61.1
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 2.4e-60 236.1 191 58.1
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 4.5e-59 231.9 197 55.3
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 5.9e-59 231.5 205 56.6
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 1.0e-58 230.7 197 54.8
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 3.8e-58 228.8 193 54.4
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 8.5e-58 227.6 158 65.8
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 8.5e-58 227.6 158 64.6
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 2.1e-56 223.0 189 56.6
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 1.4e-55 220.3 220 50.0
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 1.4e-55 220.3 202 52.5
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 1.8e-55 219.9 203 51.2
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 4.0e-55 218.8 192 56.2
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 6.8e-55 218.0 191 56.5
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 8.8e-55 217.6 228 48.2
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 8.8e-55 217.6 194 58.8
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 9.8e-54 214.2 192 53.6
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 9.8e-54 214.2 192 54.2
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 4.8e-53 211.8 171 60.2
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 5.9e-51 204.9 170 58.2
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 3.4e-46 189.1 128 66.4
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 3.4e-46 189.1 128 66.4
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 2.4e-44 183.0 192 47.9
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 1.1e-41 174.1 195 43.6
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 1.1e-41 174.1 145 59.3
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 9.8e-38 161.0 189 42.9
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 2.7e-35 152.9 159 47.8
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 2.7e-35 152.9 128 54.7
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 2.1e-32 143.3 202 41.1
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 4.0e-31 139.0 194 39.2
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 6.8e-31 138.3 192 35.9
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 5.8e-30 135.2 128 55.5
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 5.8e-30 135.2 190 36.8
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.7e-29 133.7 137 52.6
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 4.9e-29 132.1 97 62.9
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 2.7e-27 126.3 128 53.9
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 8.6e-26 121.3 142 50.0
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 1.5e-25 120.6 127 48.8
Potri.011G142501 Populus trichocarpa HOM05D006956 ORTHO05D008824 1.4e-23 114.0 92 58.7
vmacro09782 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 2.3e-23 113.2 66 71.2
Glyma.08G170300 Glycine max HOM05D006956 ORTHO05D008824 2.0e-22 110.2 157 42.0
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 7.3e-17 91.7 89 49.4
Lalb_Chr25g0284921 Lupinus albus HOM05D006956 ORTHO05D008824 4.7e-16 89.0 158 36.1
Cpa.g.sc67.70 Carica papaya HOM05D006956 ORTHO05D008824 8.9e-15 84.7 63 65.1
RcHm_v2.0_Chr5g0031421 Rosa chinensis HOM05D006956 ORTHO05D008824 1.5e-14 84.0 111 45.0
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.1e-12 77.8 113 44.2
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 1.9e-12 77.0 194 29.4
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 6.0e-11 72.0 40 70.0
SHI21449 Sapria himalayana HOM05D000257 ORTHO05D008466 1.5e-09 67.4 38 68.4
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 1.2e-08 64.3 80 43.8
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 8.1e-08 61.6 76 43.4
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 1.1e-07 61.2 74 40.5
Lju41A37T47 Lonicera japonica HOM05D006956 ORTHO05D008824 7.6e-06 55.1 44 59.1


User provided reference genes

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