Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 3.2e-153 545.0 275 100.0
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 3.8e-138 495.0 275 89.5
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 1.6e-136 489.6 275 89.8
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 2.8e-133 478.8 273 88.3
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 6.3e-133 477.6 275 87.3
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 1.4e-132 476.5 275 87.6
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 5.5e-129 464.5 276 84.4
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 9.4e-129 463.8 276 84.4
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 1.2e-128 463.4 276 84.8
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 2.2e-125 452.6 286 81.1
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 9.4e-113 410.6 279 76.0
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 6.6e-82 308.1 227 64.3
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 8.6e-82 307.8 264 59.8
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 1.1e-81 307.4 217 69.6
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 1.5e-81 307.0 217 70.5
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 9.5e-81 304.3 212 68.9
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 1.6e-80 303.5 218 65.6
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 2.1e-80 303.1 232 64.2
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 6.2e-80 301.6 235 61.3
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 8.1e-80 301.2 218 66.5
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 8.1e-80 301.2 211 67.3
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 8.1e-80 301.2 225 66.7
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 8.9e-79 297.7 224 62.5
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 3.4e-78 295.8 217 63.1
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 4.4e-78 295.4 224 63.4
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 1.3e-77 293.9 266 56.8
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 2.2e-77 293.1 218 63.3
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 6.4e-77 291.6 219 63.5
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 9.2e-76 287.7 208 64.9
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 1.6e-75 287.0 273 56.4
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 1.6e-75 287.0 273 56.4
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 2.7e-75 286.2 219 62.6
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 7.8e-75 284.6 211 63.5
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 1.0e-74 284.3 265 54.7
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.7e-74 283.5 226 60.6
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 1.7e-74 283.5 218 61.9
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 2.3e-74 283.1 231 58.4
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 2.3e-74 283.1 206 66.0
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 5.1e-74 282.0 213 64.3
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 1.9e-73 280.0 208 64.9
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 2.5e-73 279.6 235 59.6
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 1.6e-72 276.9 219 59.4
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 2.1e-72 276.6 249 53.0
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 2.8e-72 276.2 215 62.3
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 2.8e-72 276.2 214 59.3
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 4.7e-72 275.4 203 63.5
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 6.2e-72 275.0 235 59.6
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 3.1e-71 272.7 216 60.6
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 3.1e-71 272.7 208 59.1
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 3.1e-71 272.7 222 62.2
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 1.5e-70 270.4 209 63.6
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 1.5e-70 270.4 217 61.3
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 2.0e-70 270.0 238 57.6
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 3.4e-70 269.2 253 51.8
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 3.4e-70 269.2 222 61.7
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 4.4e-70 268.9 247 55.1
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 5.8e-70 268.5 222 59.5
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 1.7e-69 266.9 212 59.4
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 2.2e-69 266.5 240 56.2
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 2.2e-69 266.5 222 61.7
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 3.8e-69 265.8 196 65.8
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 8.4e-69 264.6 205 60.5
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 7.1e-68 261.5 208 61.5
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 1.2e-67 260.8 207 62.8
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 1.6e-67 260.4 183 66.1
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 3.5e-67 259.2 214 57.9
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 1.7e-66 256.9 189 66.7
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 3.0e-66 256.1 207 58.0
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 8.7e-66 254.6 291 48.1
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 2.5e-65 253.1 213 56.8
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 1.6e-64 250.4 206 60.7
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 1.8e-63 246.9 183 66.1
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 1.2e-62 244.2 215 55.8
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 9.3e-60 234.6 176 67.0
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 2.7e-59 233.0 187 62.0
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 7.9e-59 231.5 181 64.1
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 1.9e-57 226.9 175 59.4
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 3.3e-57 226.1 212 53.8
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 1.6e-56 223.8 229 49.3
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 5.3e-55 218.8 232 49.6
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 1.5e-54 217.2 223 52.0
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 1.1e-52 211.1 250 48.8
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 2.7e-51 206.5 276 42.8
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.8e-50 203.8 204 46.1
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 5.1e-50 202.2 188 58.0
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 5.6e-49 198.7 199 49.2
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 2.0e-46 190.3 142 64.8
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 4.9e-45 185.7 140 60.7
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 2.5e-44 183.3 187 46.5
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 7.1e-44 181.8 237 43.0
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 3.9e-34 149.4 162 51.9
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 7.4e-33 145.2 110 59.1
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 1.0e-29 134.8 145 46.2
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 1.1e-28 131.3 104 57.7
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 1.2e-27 127.9 212 35.4
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 2.1e-27 127.1 168 40.5
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 1.7e-24 117.5 99 56.6
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.3e-21 107.8 104 53.8
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 1.4e-20 104.4 86 58.1
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 3.2e-20 103.2 210 37.1
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 2.0e-17 94.0 82 56.1
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 1.3e-16 91.3 197 31.0
MELO3C019639.2 Cucumis melo HOM05D007250 ORTHO05D009162 3.3e-09 66.6 41 68.3
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 5.7e-09 65.9 80 40.0
VMungo1080G0363 Vigna mungo HOM05D007250 ORTHO05D009162 1.2e-06 58.2 40 52.5
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 2.0e-06 57.4 54 48.1


User provided reference genes

Program Settings