Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g14410 Schrenkiella parvula HOM05D003613 ORTHO05D004055 2.2e-45 185.3 93 100.0
Thhalv10009201m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 7.0e-44 180.3 93 95.7
CARHR016650 Cardamine hirsuta HOM05D003613 ORTHO05D004055 1.1e-41 172.9 93 92.5
BolC5t30160H Brassica oleracea HOM05D003613 ORTHO05D004055 4.3e-41 171.0 93 90.3
Carub.0001s1593 Capsella rubella HOM05D003613 ORTHO05D004055 7.3e-41 170.2 93 89.2
BcaC05g25604 Brassica carinata HOM05D003613 ORTHO05D004055 2.8e-40 168.3 93 89.2
C05p14290 Brassica napus HOM05D003613 ORTHO05D004055 3.6e-40 167.9 93 89.2
A09p61000 Brassica napus HOM05D003613 ORTHO05D004055 1.8e-39 165.6 94 89.4
BraA09t41473Z Brassica rapa HOM05D003613 ORTHO05D004055 1.8e-39 165.6 94 89.4
A06p12110 Brassica napus HOM05D003613 ORTHO05D004055 2.3e-39 165.2 94 89.4
BraA06t24380Z Brassica rapa HOM05D003613 ORTHO05D004055 2.3e-39 165.2 94 89.4
BcaB02g06598 Brassica carinata HOM05D003613 ORTHO05D004055 3.1e-39 164.9 94 91.5
AL1G28300 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 6.8e-39 163.7 93 87.1
Thhalv10019378m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 7.5e-38 160.2 94 81.9
BcaB03g14503 Brassica carinata HOM05D003613 ORTHO05D004055 1.3e-37 159.5 94 87.2
C08p44600 Brassica napus HOM05D003613 ORTHO05D004055 1.3e-37 159.5 94 87.2
BolC8t52006H Brassica oleracea HOM05D003613 ORTHO05D004055 1.3e-37 159.5 94 87.2
AT1G16170 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 2.2e-37 158.7 93 84.9
Carub.0002s2654 Capsella rubella HOM05D003613 ORTHO05D004055 6.4e-37 157.1 94 79.8
Sp5g34740 Schrenkiella parvula HOM05D003613 ORTHO05D004055 8.3e-37 156.8 94 78.7
AL2G40350 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 3.2e-36 154.8 94 79.8
AT1G79660 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 5.4e-36 154.1 94 77.7
Aa31LG7G710 Aethionema arabicum HOM05D003613 ORTHO05D004055 7.0e-36 153.7 93 82.8
BcaC07g38803 Brassica carinata HOM05D003613 ORTHO05D004055 2.7e-35 151.8 94 86.2
C08p17390 Brassica napus HOM05D003613 ORTHO05D004055 2.7e-35 151.8 94 86.2
BolC8t49365H Brassica oleracea HOM05D003613 ORTHO05D004055 2.7e-35 151.8 94 86.2
A08p31400 Brassica napus HOM05D003613 ORTHO05D004055 5.0e-34 147.5 94 84.0
BraA08t35063Z Brassica rapa HOM05D003613 ORTHO05D004055 5.0e-34 147.5 94 84.0
CARHR073400 Cardamine hirsuta HOM05D003613 ORTHO05D004055 8.6e-34 146.7 94 77.7
Aa31LG4G1310 Aethionema arabicum HOM05D003613 ORTHO05D004055 5.6e-33 144.1 84 78.6
BcaB03g13047 Brassica carinata HOM05D003613 ORTHO05D004055 9.5e-33 143.3 94 81.9
BcaC08g47525 Brassica carinata HOM05D003613 ORTHO05D004055 1.6e-32 142.5 95 76.8
BolC6t40365H Brassica oleracea HOM05D003613 ORTHO05D004055 1.6e-32 142.5 95 76.8
BcaC03g14996 Brassica carinata HOM05D003613 ORTHO05D004055 2.1e-32 142.1 77 90.9
C02p25300 Brassica napus HOM05D003613 ORTHO05D004055 2.1e-32 142.1 77 90.9
BolC2t08604H Brassica oleracea HOM05D003613 ORTHO05D004055 2.1e-32 142.1 77 90.9
BcaC08g47524 Brassica carinata HOM05D003613 ORTHO05D004055 3.6e-32 141.4 95 74.7
A07p44660 Brassica napus HOM05D003613 ORTHO05D004055 4.0e-31 137.9 95 73.7
BraA07t31975Z Brassica rapa HOM05D003613 ORTHO05D004055 4.0e-31 137.9 95 73.7
BcaC03g17203 Brassica carinata HOM05D003613 ORTHO05D004055 2.0e-30 135.6 77 87.0
BolC2t11219H Brassica oleracea HOM05D003613 ORTHO05D004055 2.0e-30 135.6 77 87.0
BolC8t51544H Brassica oleracea HOM05D003613 ORTHO05D004055 2.6e-30 135.2 77 88.3
C08p39730 Brassica napus HOM05D003613 ORTHO05D004055 3.4e-30 134.8 77 87.0
THA.LOC104813597 Tarenaya hassleriana HOM05D003613 ORTHO05D004055 7.1e-28 127.1 94 68.1
Thecc.06G133700 Theobroma cacao HOM05D003613 ORTHO05D004055 9.5e-25 116.7 96 65.6
Cpa.g.sc68.45 Carica papaya HOM05D003613 ORTHO05D004055 1.6e-24 115.9 92 66.3
Dinv21437 Davidia involucrata HOM05D003613 ORTHO05D004055 2.8e-24 115.2 103 64.1
Atru.chr1.2819 Acer truncatum HOM05D003613 ORTHO05D004055 3.6e-24 114.8 96 64.6
Manes.04G099000 Manihot esculenta HOM05D003613 ORTHO05D004055 4.7e-24 114.4 96 61.5
RcHm_v2.0_Chr2g0131951 Rosa chinensis HOM05D003613 ORTHO05D004055 6.2e-24 114.0 96 63.5
Manes.11G070600 Manihot esculenta HOM05D003613 ORTHO05D004055 1.1e-23 113.2 95 63.2
COL.COLO4_30901 Corchorus olitorius HOM05D003613 ORTHO05D004055 1.4e-23 112.8 96 61.5
Gohir.A10G049000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.8e-23 112.5 96 66.7
Gohir.D06G146000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 2.3e-23 112.1 96 65.6
Gohir.D10G049600 Gossypium hirsutum HOM05D003613 ORTHO05D004055 2.3e-23 112.1 96 66.7
Gorai.010G170200 Gossypium raimondii HOM05D003613 ORTHO05D004055 2.3e-23 112.1 96 65.6
Gorai.011G053100 Gossypium raimondii HOM05D003613 ORTHO05D004055 2.3e-23 112.1 96 66.7
ClCG10G012830 Citrullus lanatus HOM05D003613 ORTHO05D004055 4.0e-23 111.3 96 60.4
CsaV3_3G032670 Cucumis sativus L. HOM05D003613 ORTHO05D004055 4.0e-23 111.3 96 60.4
Nitab4.5_0005437g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 1.2e-22 109.8 107 60.7
MELO3C024884.2 Cucumis melo HOM05D003613 ORTHO05D004055 1.5e-22 109.4 96 59.4
Duzib192G0866 Durio zibethinus HOM05D003613 ORTHO05D004055 1.5e-22 109.4 96 62.5
TWI75G1756 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 2.0e-22 109.0 96 62.5
MELO3C029246.2 Cucumis melo HOM05D003613 ORTHO05D004055 2.6e-22 108.6 95 63.2
Gohir.A06G141700 Gossypium hirsutum HOM05D003613 ORTHO05D004055 2.6e-22 108.6 96 63.5
HanXRQChr05g0157501 Helianthus annuus HOM05D003613 ORTHO05D004055 3.4e-22 108.2 103 57.3
Duzib235G1294 Durio zibethinus HOM05D003613 ORTHO05D004055 4.4e-22 107.8 96 62.5
SGA_v2.0_scaffold74G24606 Striga asiatica HOM05D003613 ORTHO05D004055 5.8e-22 107.5 106 59.4
MSTRG.9389 Avicennia marina HOM05D003613 ORTHO05D004055 7.6e-22 107.1 105 61.9
ClCG09G003430 Citrullus lanatus HOM05D003613 ORTHO05D004055 9.9e-22 106.7 95 61.1
ECA247G1662 Erigeron canadensis HOM05D003613 ORTHO05D004055 9.9e-22 106.7 102 57.8
SGA_v2.0_scaffold515G52657 Striga asiatica HOM05D003613 ORTHO05D004055 9.9e-22 106.7 106 59.4
Actinidia36859 Actinidia chinensis HOM05D000338 ORTHO05D003721 1.3e-21 106.3 108 55.6
MSTRG.22838 Avicennia marina HOM05D003613 ORTHO05D004055 1.3e-21 106.3 105 60.0
FAN02G4453 Fragaria x ananassa HOM05D003613 ORTHO05D004055 1.7e-21 105.9 91 62.6
Lalb_Chr19g0125611 Lupinus albus HOM05D003613 ORTHO05D004055 1.7e-21 105.9 94 64.9
Eucgr.F03989 Eucalyptus grandis HOM05D003613 ORTHO05D004055 2.2e-21 105.5 96 62.5
Oeu033454.1 Olea europaea HOM05D003613 ORTHO05D004055 2.2e-21 105.5 106 59.4
GSVIVG01016088001 Vitis vinifera HOM05D003613 ORTHO05D004055 2.9e-21 105.1 103 61.2
CAN.G1008.14 Capsicum annuum HOM05D003613 ORTHO05D004055 3.7e-21 104.8 106 58.5
CsaV3_7G031790 Cucumis sativus L. HOM05D003613 ORTHO05D004055 3.7e-21 104.8 95 60.0
Ciclev10026842m.g Citrus clementina HOM05D003613 ORTHO05D004055 6.4e-21 104.0 96 60.4
Prupe.3G105500 Prunus persica HOM05D003613 ORTHO05D004055 6.4e-21 104.0 96 59.4
Rhsim12G0183300 Rhododendron simsii HOM05D003613 ORTHO05D004055 6.4e-21 104.0 106 57.5
HanXRQChr04g0100011 Helianthus annuus HOM05D003613 ORTHO05D004055 8.4e-21 103.6 103 56.3
CiPaw.01G052100 Carya illinoinensis HOM05D003613 ORTHO05D004055 1.1e-20 103.2 96 60.4
Potri.001G040300 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.1e-20 103.2 96 60.4
Nn8g40130 Nelumbo nucifera HOM05D003613 ORTHO05D004055 1.9e-20 102.4 103 60.2
Oeu051549.1 Olea europaea HOM05D003613 ORTHO05D004055 1.9e-20 102.4 105 58.1
Potri.001G038750 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.9e-20 102.4 96 58.3
TWI31G1088 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 1.9e-20 102.4 93 60.2
Lsat_1_v5_gn_5_9061 Lactuca sativa HOM05D003613 ORTHO05D004055 2.4e-20 102.1 103 57.3
MD09G1229400 Malus domestica HOM05D003613 ORTHO05D004055 2.4e-20 102.1 96 58.3
ECA246G2284 Erigeron canadensis HOM05D003613 ORTHO05D004055 3.2e-20 101.7 103 57.3
Sed0006875 Sechium edule HOM05D003613 ORTHO05D004055 3.2e-20 101.7 96 58.3
MSTRG.11218 Avicennia marina HOM05D003613 ORTHO05D004055 4.1e-20 101.3 102 57.8
CSS0042010 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 4.1e-20 101.3 108 54.6
Duzib160G0323 Durio zibethinus HOM05D003613 ORTHO05D004055 4.1e-20 101.3 96 60.4
Cc04_g05380 Coffea canephora HOM05D003613 ORTHO05D004055 5.4e-20 100.9 103 60.2
MD17G1228300 Malus domestica HOM05D003613 ORTHO05D004055 5.4e-20 100.9 96 57.3
Potri.001G038200 Populus trichocarpa HOM05D003613 ORTHO05D004055 5.4e-20 100.9 96 57.3
Sed0012530 Sechium edule HOM05D003613 ORTHO05D004055 5.4e-20 100.9 93 58.1
Rhsim08G0202400 Rhododendron simsii HOM05D003613 ORTHO05D004055 7.1e-20 100.5 104 54.8
Sopen03g036670 Solanum pennellii HOM05D003613 ORTHO05D004055 7.1e-20 100.5 106 58.5
PGSC0003DMG400014217 Solanum tuberosum HOM05D003613 ORTHO05D004055 9.2e-20 100.1 106 57.5
vmacro19080 Vaccinium macrocarpon HOM05D003613 ORTHO05D004055 9.2e-20 100.1 104 56.7
Lalb_Chr16g0383261 Lupinus albus HOM05D003613 ORTHO05D004055 1.2e-19 99.8 93 57.0
Potri.003G186400 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.2e-19 99.8 96 56.2
Lsat_1_v5_gn_4_84900 Lactuca sativa HOM05D003613 ORTHO05D004055 2.7e-19 98.6 100 58.0
Sopen12g021630 Solanum pennellii HOM05D003613 ORTHO05D004055 3.5e-19 98.2 106 57.5
VMungo0540G1949 Vigna mungo HOM05D003613 ORTHO05D004055 3.5e-19 98.2 96 57.3
Haze_15237 Corylus avellana HOM05D003613 ORTHO05D004055 4.6e-19 97.8 96 56.2
Phvul.006G195900 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 7.8e-19 97.1 96 56.2
Sed0021976 Sechium edule HOM05D003613 ORTHO05D004055 7.8e-19 97.1 96 56.2
TAR383G0763 Trochodendron aralioides HOM05D003613 ORTHO05D004055 7.8e-19 97.1 103 57.3
Cfa004173 Carpinus fangiana HOM05D003613 ORTHO05D004055 1.0e-18 96.7 96 56.2
unitig_8.g3041 Utricularia gibba HOM05D003613 ORTHO05D004055 1.0e-18 96.7 105 52.4
Haze_16413 Corylus avellana HOM05D003613 ORTHO05D004055 1.3e-18 96.3 96 55.2
Haze_16416 Corylus avellana HOM05D003613 ORTHO05D004055 1.3e-18 96.3 96 55.2
Glyma.13G250700 Glycine max HOM05D003613 ORTHO05D004055 1.3e-18 96.3 96 56.2
Glyma.15G063700 Glycine max HOM05D003613 ORTHO05D004055 1.3e-18 96.3 96 56.2
Solyc12g042540.1 Solanum lycopersicum HOM05D003613 ORTHO05D004055 1.3e-18 96.3 106 57.5
ECA232G3259 Erigeron canadensis HOM05D003613 ORTHO05D004055 1.7e-18 95.9 100 57.0
Nitab4.5_0002700g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 1.7e-18 95.9 79 67.1
PGSC0003DMG400014438 Solanum tuberosum HOM05D003613 ORTHO05D004055 1.7e-18 95.9 106 56.6
SalBow1G4637 Salvia bowleyana HOM05D003613 ORTHO05D004055 3.0e-18 95.1 105 53.3
unitig_22.g6276 Utricularia gibba HOM05D003613 ORTHO05D004055 3.9e-18 94.7 105 52.4
DCAR_025611 Daucus carota HOM05D003613 ORTHO05D004055 5.1e-18 94.4 102 53.9
Lalb_Chr09g0327111 Lupinus albus HOM05D003613 ORTHO05D004055 5.1e-18 94.4 94 57.4
Migut.I00632 Erythranthe guttata HOM05D003613 ORTHO05D004055 6.6e-18 94.0 107 55.1
FAN14G0884 Fragaria x ananassa HOM05D008004 ORTHO05D004055 6.6e-18 94.0 77 64.9
Aqoxy5G00706 Aquilegia oxysepala HOM05D003613 ORTHO05D004055 8.6e-18 93.6 100 54.0
Sabra03G0136400 Salix brachista HOM05D003613 ORTHO05D004055 8.6e-18 93.6 81 59.3
Lj6g0025627 Lotus japonicus HOM05D003613 ORTHO05D004055 1.5e-17 92.8 96 55.2
TPR.G32634 Trifolium pratense HOM05D003613 ORTHO05D004055 1.5e-17 92.8 95 55.8
Nn2g12477 Nelumbo nucifera HOM05D003613 ORTHO05D004055 1.9e-17 92.4 105 56.2
Lalb_Chr20g0122601 Lupinus albus HOM05D003613 ORTHO05D004055 5.6e-17 90.9 96 57.3
Psat1g210880 Pisum sativum HOM05D003613 ORTHO05D004055 5.6e-17 90.9 96 55.2
Glyma.01G154800 Glycine max HOM05D003613 ORTHO05D004055 7.3e-17 90.5 96 51.0
Peaxi162Scf00195g00118 Petunia axillaris HOM05D003613 ORTHO05D004055 9.6e-17 90.1 84 60.7
Medtr2g010880 Medicago truncatula HOM05D003613 ORTHO05D004055 1.2e-16 89.7 95 53.7
QL12p003368 Quercus lobata HOM05D003613 ORTHO05D004055 1.2e-16 89.7 93 58.1
Gohir.D09G076100 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.6e-16 89.4 94 51.1
Sabra03G0136500 Salix brachista HOM05D003613 ORTHO05D004055 1.6e-16 89.4 81 55.6
Migut.D01149 Erythranthe guttata HOM05D003613 ORTHO05D004055 2.1e-16 89.0 107 51.4
arahy.Tifrunner.gnm1.ann1.T22GZM Arachis hypogaea HOM05D003613 ORTHO05D004055 2.8e-16 88.6 85 60.0
Gorai.006G091300 Gossypium raimondii HOM05D003613 ORTHO05D004055 3.6e-16 88.2 94 51.1
Os08g0266200 Oryza sativa ssp. japonica HOM05D003613 ORTHO05D004055 6.2e-16 87.4 102 51.0
Ca_00210_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 8.1e-16 87.0 97 55.7
FvH4_6g28090 Fragaria vesca HOM05D008004 ORTHO05D011218 8.1e-16 87.0 72 65.3
Potri.001G039700 Populus trichocarpa HOM05D003613 ORTHO05D004055 8.1e-16 87.0 73 63.0
EL10Ac5g12047 Beta vulgaris HOM05D003613 ORTHO05D004055 1.8e-15 85.9 99 51.5
Glyma.15G176700 Glycine max HOM05D003613 ORTHO05D004055 1.8e-15 85.9 96 50.0
Gohir.A09G076160 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.8e-15 85.9 94 50.0
MBI14_g16433_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 1.8e-15 85.9 106 49.1
Ah.12g055300 Amaranthus hybridus HOM05D003613 ORTHO05D004055 3.1e-15 85.1 103 50.5
Phvul.002G218400 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 3.1e-15 85.1 93 50.5
arahy.Tifrunner.gnm1.ann1.DB50AT Arachis hypogaea HOM05D003613 ORTHO05D004055 4.0e-15 84.7 94 51.1
QL10p043081 Quercus lobata HOM05D003613 ORTHO05D004055 4.0e-15 84.7 93 55.9
arahy.Tifrunner.gnm1.ann1.M9YY7V Arachis hypogaea HOM05D003613 ORTHO05D004055 5.2e-15 84.3 94 52.1
arahy.Tifrunner.gnm1.ann1.XPM13Z Arachis hypogaea HOM05D003613 ORTHO05D004055 2.6e-14 82.0 77 59.7
Zm00001eb177920 Zea mays HOM05D003613 ORTHO05D004055 5.8e-14 80.9 98 53.1
SHI11349 Sapria himalayana HOM05D003613 ORTHO05D004055 9.9e-14 80.1 79 53.2
CSS0016880 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 1.3e-13 79.7 78 59.0
Glyma.07G187000 Glycine max HOM05D003613 ORTHO05D004055 1.3e-13 79.7 93 51.6
Lj4g0025384 Lotus japonicus HOM05D003613 ORTHO05D004055 1.3e-13 79.7 95 50.5
AUR62018676 Chenopodium quinoa HOM05D003613 ORTHO05D004055 1.7e-13 79.3 100 49.0
SEGI_37804 Sequoiadendron giganteum HOM05D003613 ORTHO05D004055 1.7e-13 79.3 98 49.0
ATR0580G444 Amborella trichopoda HOM05D003613 ORTHO05D004055 2.9e-13 78.6 104 49.0
Glyma.08G062200 Glycine max HOM05D003613 ORTHO05D004055 6.4e-13 77.4 94 50.0
MBI15_g26076_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 6.4e-13 77.4 75 56.0
TAR626G0045 Trochodendron aralioides HOM05D003147 ORTHO05D004055 1.4e-12 76.3 92 52.2
DCAR_021377 Daucus carota HOM05D003613 ORTHO05D004055 1.9e-12 75.9 87 49.4
ATR0068G040 Amborella trichopoda HOM05D003613 ORTHO05D004055 2.4e-12 75.5 104 48.1
Zm00001eb412000 Zea mays HOM05D003613 ORTHO05D004055 2.4e-12 75.5 99 50.5
Ca_18450_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 1.2e-11 73.2 81 50.6
BraA07t30345Z Brassica rapa HOM05D003613 ORTHO05D004055 1.7e-10 69.3 39 76.9
C06p29730 Brassica napus HOM05D003613 ORTHO05D004055 3.0e-10 68.6 37 81.1
TPR.G13916 Trifolium pratense HOM05D003613 ORTHO05D004055 1.5e-09 66.2 80 43.8
arahy.Tifrunner.gnm1.ann1.LI0G0T Arachis hypogaea HOM05D003613 ORTHO05D004055 2.5e-09 65.5 60 60.0
DCAR_021376 Daucus carota HOM05D003613 ORTHO05D004055 1.4e-07 59.7 77 49.4
SMO307G0037 Selaginella moellendorffii HOM05D000818 ORTHO05D004055 6.9e-07 57.4 73 47.9
Nitab4.5_0002302g0110 Nicotiana tabacum HOM05D003613 ORTHO05D004055 1.2e-06 56.6 49 63.3
SMO001G0027 Selaginella moellendorffii HOM05D003613 ORTHO05D004055 2.6e-06 55.5 73 46.6
AagrBONN_evm.TU.Sc2ySwM_368.2820 Anthoceros agrestis HOM05D003613 ORTHO05D004055 5.8e-06 54.3 71 43.7
Pp3c10_10840 Physcomitrium patens HOM05D003613 ORTHO05D004055 9.9e-06 53.5 84 41.7


User provided reference genes

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