Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g14360 Schrenkiella parvula HOM05D004918 ORTHO05D005706 8.5e-131 470.3 233 100.0
A09p61040 Brassica napus HOM05D004918 ORTHO05D005706 1.5e-111 406.4 233 85.4
BraA09t41477Z Brassica rapa HOM05D004918 ORTHO05D005706 1.3e-110 403.3 233 84.5
C05p14240 Brassica napus HOM05D004918 ORTHO05D005706 4.9e-110 401.4 234 85.0
BcaC07g38802 Brassica carinata HOM05D004918 ORTHO05D005706 8.3e-110 400.6 233 85.0
C08p17380 Brassica napus HOM05D004918 ORTHO05D005706 8.3e-110 400.6 233 85.4
BolC8t49364H Brassica oleracea HOM05D004918 ORTHO05D005706 8.3e-110 400.6 233 85.4
BcaC05g25623 Brassica carinata HOM05D004918 ORTHO05D005706 1.4e-109 399.8 234 84.6
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 4.1e-109 398.3 230 84.8
A06p12070 Brassica napus HOM05D004918 ORTHO05D005706 2.0e-108 396.0 233 83.3
BcaB02g06654 Brassica carinata HOM05D004918 ORTHO05D005706 4.5e-108 394.8 233 84.1
A08p31410 Brassica napus HOM05D004918 ORTHO05D005706 1.0e-107 393.7 225 83.6
BolC5t30156H Brassica oleracea HOM05D004918 ORTHO05D005706 1.0e-107 393.7 235 84.3
BraA08t35064Z Brassica rapa HOM05D004918 ORTHO05D005706 5.0e-107 391.3 225 83.1
BcaB03g14507 Brassica carinata HOM05D004918 ORTHO05D005706 1.9e-106 389.4 236 81.8
BraA06t24376Z Brassica rapa HOM05D004918 ORTHO05D005706 2.5e-106 389.0 234 82.5
Thhalv10008658m.g Eutrema salsugineum HOM05D004918 ORTHO05D005706 4.3e-106 388.3 234 81.2
Aa31LG7G620 Aethionema arabicum HOM05D004918 ORTHO05D005706 7.3e-106 387.5 233 80.7
CARHR016550 Cardamine hirsuta HOM05D004918 ORTHO05D005706 1.4e-101 373.2 233 78.5
AL1G28210 Arabidopsis lyrata HOM05D004918 ORTHO05D005706 1.3e-99 366.7 233 77.3
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 2.3e-99 365.9 255 74.1
Carub.0001s1585 Capsella rubella HOM05D004918 ORTHO05D005706 1.9e-98 362.8 233 75.5
BcaB03g13048 Brassica carinata HOM05D004918 ORTHO05D005706 1.9e-93 346.3 247 73.7
THA.LOC104808174 Tarenaya hassleriana HOM05D004918 ORTHO05D005706 2.3e-88 329.3 226 68.6
AT1G16040 Arabidopsis thaliana HOM05D004918 ORTHO05D005706 3.7e-86 322.0 215 72.1
THA.LOC104812419 Tarenaya hassleriana HOM05D004918 ORTHO05D005706 1.1e-82 310.5 231 64.9
Cpa.g.sc14.108 Carica papaya HOM05D004918 ORTHO05D005706 1.7e-70 270.0 211 61.6
Manes.11G069000 Manihot esculenta HOM05D004918 ORTHO05D005706 2.9e-70 269.2 235 55.3
Thecc.06G046100 Theobroma cacao HOM05D004918 ORTHO05D005706 4.9e-70 268.5 224 56.2
Duzib192G0308 Durio zibethinus HOM05D004918 ORTHO05D005706 5.4e-69 265.0 214 54.7
Gorai.009G122300 Gossypium raimondii HOM05D004918 ORTHO05D005706 7.1e-69 264.6 231 55.4
Ciclev10026430m.g Citrus clementina HOM05D004918 ORTHO05D005706 3.5e-68 262.3 201 60.2
Oeu004556.1 Olea europaea HOM05D004918 ORTHO05D005706 1.3e-67 260.4 204 60.8
Gohir.A05G117500 Gossypium hirsutum HOM05D004918 ORTHO05D005706 1.7e-67 260.0 231 54.5
Migut.I00673 Erythranthe guttata HOM05D004918 ORTHO05D005706 3.0e-67 259.2 226 56.6
Actinidia25464 Actinidia chinensis HOM05D004918 ORTHO05D005706 5.1e-67 258.5 223 55.2
TWI12G0375 Tripterygium wilfordii HOM05D004918 ORTHO05D005706 8.7e-67 257.7 222 55.4
Atru.chr1.2801 Acer truncatum HOM05D004918 ORTHO05D005706 1.5e-66 256.9 199 61.8
CSS0025832 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 2.5e-66 256.1 204 56.9
Dinv23270 Davidia involucrata HOM05D004918 ORTHO05D005706 2.5e-66 256.1 220 54.5
DCAR_025541 Daucus carota HOM05D004918 ORTHO05D005706 4.3e-66 255.4 227 55.1
Potri.003G184701 Populus trichocarpa HOM05D004918 ORTHO05D005706 4.3e-66 255.4 230 56.1
GSVIVG01016107001 Vitis vinifera HOM05D004918 ORTHO05D005706 9.6e-66 254.2 213 56.8
TAR625G0238 Trochodendron aralioides HOM05D004918 ORTHO05D005706 1.3e-65 253.8 214 54.7
Prupe.3G103300 Prunus persica HOM05D004918 ORTHO05D005706 1.6e-65 253.4 222 58.1
Nn2g14031 Nelumbo nucifera HOM05D004918 ORTHO05D005706 2.1e-65 253.1 229 53.3
PGR102G0155 Punica granatum HOM05D004918 ORTHO05D005706 2.1e-65 253.1 229 55.0
Lj6g0018730 Lotus japonicus HOM05D004918 ORTHO05D005706 2.8e-65 252.7 210 56.7
Sabra03G0135200 Salix brachista HOM05D004918 ORTHO05D005706 2.8e-65 252.7 227 55.9
Cfa001859 Carpinus fangiana HOM05D004918 ORTHO05D005706 6.2e-65 251.5 212 58.5
Atru.chr8.1159 Acer truncatum HOM05D004918 ORTHO05D005706 1.1e-64 250.8 199 60.8
MD12G1013200 Malus domestica HOM05D004918 ORTHO05D005706 1.1e-64 250.8 221 56.6
MSTRG.22808 Avicennia marina HOM05D004918 ORTHO05D005706 3.1e-64 249.2 200 58.0
Sc05g0005820 Simmondsia chinensis HOM05D004918 ORTHO05D005706 4.0e-64 248.8 197 56.3
Nn2g12451 Nelumbo nucifera HOM05D004918 ORTHO05D005706 5.3e-64 248.4 225 52.0
Peaxi162Scf00314g01045 Petunia axillaris HOM05D004918 ORTHO05D005706 5.3e-64 248.4 233 51.9
RcHm_v2.0_Chr2g0132361 Rosa chinensis HOM05D004918 ORTHO05D005706 6.9e-64 248.1 221 55.2
arahy.Tifrunner.gnm1.ann1.T9YNFF Arachis hypogaea HOM05D004918 ORTHO05D005706 1.2e-63 247.3 209 54.5
Hma1.2p1_1914F.1_g307380 Hydrangea macrophylla HOM05D004918 ORTHO05D005706 1.2e-63 247.3 204 54.9
Eucgr.F03982 Eucalyptus grandis HOM05D004918 ORTHO05D005706 1.5e-63 246.9 235 53.2
Medtr3g110270 Medicago truncatula HOM05D004918 ORTHO05D005706 2.0e-63 246.5 205 56.1
Glyma.09G000800 Glycine max HOM05D004918 ORTHO05D005706 2.6e-63 246.1 230 50.0
MD14G1138800 Malus domestica HOM05D004918 ORTHO05D005706 3.4e-63 245.7 223 56.1
VMungo1309G0542 Vigna mungo HOM05D004918 ORTHO05D005706 3.4e-63 245.7 220 54.1
Ah.01g002790 Amaranthus hybridus HOM05D004918 ORTHO05D005706 5.8e-63 245.0 201 55.2
TPR.G15094 Trifolium pratense HOM05D004918 ORTHO05D005706 7.6e-63 244.6 226 54.4
ClCG10G012810 Citrullus lanatus HOM05D004918 ORTHO05D005706 3.8e-62 242.3 196 57.1
Psat5g020280 Pisum sativum HOM05D004918 ORTHO05D005706 3.8e-62 242.3 196 57.7
Lalb_Chr13g0301111 Lupinus albus HOM05D004918 ORTHO05D005706 8.4e-62 241.1 217 53.5
Sopen03g036560 Solanum pennellii HOM05D004918 ORTHO05D005706 1.4e-61 240.4 230 51.3
PGSC0003DMG400014153 Solanum tuberosum HOM05D004918 ORTHO05D005706 2.4e-61 239.6 210 53.8
CiPaw.01G073400 Carya illinoinensis HOM05D004918 ORTHO05D005706 3.2e-61 239.2 203 58.6
SGA_v2.0_scaffold419G51286 Striga asiatica HOM05D004918 ORTHO05D005706 5.4e-61 238.4 193 56.5
Cc04_g05280 Coffea canephora HOM05D004918 ORTHO05D005706 9.3e-61 237.7 204 53.9
Cc04_g05650 Coffea canephora HOM05D004918 ORTHO05D005706 1.2e-60 237.3 227 52.0
Nitab4.5_0004738g0120 Nicotiana tabacum HOM05D004918 ORTHO05D005706 1.2e-60 237.3 236 50.0
PGSC0003DMG402014462 Solanum tuberosum HOM05D004918 ORTHO05D005706 1.6e-60 236.9 205 54.6
CiPaw.02G163500 Carya illinoinensis HOM05D004918 ORTHO05D005706 2.1e-60 236.5 227 52.4
CsaV3_3G032650 Cucumis sativus L. HOM05D004918 ORTHO05D005706 2.1e-60 236.5 217 53.5
ECA232G4560 Erigeron canadensis HOM05D004918 ORTHO05D005706 2.7e-60 236.1 210 54.8
Nitab4.5_0002700g0180 Nicotiana tabacum HOM05D004918 ORTHO05D005706 2.7e-60 236.1 230 50.0
Phvul.009G194500 Phaseolus vulgaris HOM05D004918 ORTHO05D005706 3.5e-60 235.7 215 52.1
HanXRQChr17g0561891 Helianthus annuus HOM05D004918 ORTHO05D005706 6.0e-60 235.0 232 52.2
HanXRQChr10g0298641 Helianthus annuus HOM05D004918 ORTHO05D005706 7.9e-60 234.6 191 57.1
CANSAT35G0550 Cannabis sativa HOM05D004918 ORTHO05D005706 1.3e-59 233.8 228 48.7
Sed0025979 Sechium edule HOM05D004918 ORTHO05D005706 1.8e-59 233.4 245 46.9
SalBow8G2778 Salvia bowleyana HOM05D004918 ORTHO05D005706 1.1e-58 230.7 211 52.6
COL.COLO4_24896 Corchorus olitorius HOM05D004918 ORTHO05D005706 1.9e-58 229.9 201 55.7
QL10p031453 Quercus lobata HOM05D004918 ORTHO05D005706 9.6e-58 227.6 174 59.2
FAN09G4697 Fragaria x ananassa HOM05D004918 ORTHO05D005706 1.6e-57 226.9 231 50.2
CDE02G0643 Ceratophyllum demersum HOM05D004918 ORTHO05D005706 2.8e-57 226.1 196 55.1
PSO724G0600 Papaver somniferum HOM05D004918 ORTHO05D005706 8.1e-57 224.6 225 44.4
PSO729G0217 Papaver somniferum HOM05D004918 ORTHO05D005706 1.1e-56 224.2 225 44.4
PSO063G6564 Papaver somniferum HOM05D004918 ORTHO05D005706 1.8e-56 223.4 225 44.4
PSO017G2949 Papaver somniferum HOM05D004918 ORTHO05D005706 3.1e-56 222.6 225 44.4
MBI19_g12142_MAGBIO Magnolia biondii HOM05D004918 ORTHO05D005706 1.2e-55 220.7 210 51.9
arahy.Tifrunner.gnm1.ann1.ZUNL57 Arachis hypogaea HOM05D004918 ORTHO05D005706 3.4e-55 219.2 234 47.9
Sopen12g021620 Solanum pennellii HOM05D004918 ORTHO05D005706 1.3e-54 217.2 210 51.0
Rhsim08G0203200 Rhododendron simsii HOM05D004918 ORTHO05D005706 3.8e-54 215.7 175 61.1
FAN02G2144 Fragaria x ananassa HOM05D004918 ORTHO05D005706 1.4e-53 213.8 244 47.5
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 1.9e-53 213.4 189 54.0
Glyma.09G000900 Glycine max HOM05D004918 ORTHO05D005706 3.2e-53 212.6 167 54.5
SEGI_14369 Sequoiadendron giganteum HOM05D004918 ORTHO05D005706 5.5e-53 211.8 187 49.2
Oeu035883.1 Olea europaea HOM05D004918 ORTHO05D005706 7.1e-53 211.5 192 54.7
Solyc03g117650.4 Solanum lycopersicum HOM05D004918 ORTHO05D005706 1.2e-52 210.7 210 49.5
Solyc12g042530.2 Solanum lycopersicum HOM05D004918 ORTHO05D005706 1.2e-52 210.7 210 49.5
MELO3C028676.2 Cucumis melo HOM05D004918 ORTHO05D005706 7.9e-52 208.0 219 48.4
Lsat_1_v5_gn_4_85101 Lactuca sativa HOM05D004918 ORTHO05D005706 1.8e-51 206.8 190 54.2
HPP92_001544 Vanilla planifolia HOM05D004918 ORTHO05D005706 1.3e-49 200.7 196 49.0
HanXRQChr16g0499441 Helianthus annuus HOM05D004918 ORTHO05D005706 1.6e-49 200.3 217 49.8
SHI05687 Sapria himalayana HOM05D004918 ORTHO05D005706 6.2e-49 198.4 195 48.7
Zm00001eb403520 Zea mays HOM05D004918 ORTHO05D005706 1.4e-48 197.2 212 48.6
CAN.G276.2 Capsicum annuum HOM05D004918 ORTHO05D005706 3.1e-48 196.1 158 57.6
Haze_16687 Corylus avellana HOM05D004918 ORTHO05D005706 3.1e-48 196.1 193 54.4
ATR0568G024 Amborella trichopoda HOM05D004918 ORTHO05D005706 2.0e-47 193.4 175 49.1
vmacro19072 Vaccinium macrocarpon HOM05D004918 ORTHO05D005706 2.6e-47 193.0 201 49.8
FAN09G3573 Fragaria x ananassa HOM05D004918 ORTHO05D005706 1.7e-46 190.3 239 45.2
Aqoxy4G02614 Aquilegia oxysepala HOM05D004918 ORTHO05D005706 3.5e-44 182.6 122 63.9
Os03g0129000 Oryza sativa ssp. japonica HOM05D004918 ORTHO05D005706 1.0e-43 181.0 192 46.9
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 3.1e-40 169.5 196 43.4
unitig_62.g23577 Utricularia gibba HOM05D004918 ORTHO05D005706 3.1e-40 169.5 245 39.2
Ca_15577_v3 Cicer arietinum L. HOM05D004918 ORTHO05D005706 2.0e-39 166.8 106 68.9
FAN14G3036 Fragaria x ananassa HOM05D004918 ORTHO05D005706 2.6e-39 166.4 262 41.6
CAN.G1008.5 Capsicum annuum HOM05D000348 ORTHO05D005706 4.5e-39 165.6 114 64.9
Pp3c8_15970 Physcomitrium patens HOM05D004918 ORTHO05D005706 7.6e-39 164.9 189 42.3
Mapoly0005s0096 Marchantia polymorpha HOM05D004918 ORTHO05D005706 1.0e-38 164.5 189 40.7
arahy.Tifrunner.gnm1.ann1.BN6NH6 Arachis hypogaea HOM05D004918 ORTHO05D005706 3.2e-37 159.5 218 41.7
arahy.Tifrunner.gnm1.ann1.U5XJV3 Arachis hypogaea HOM05D004918 ORTHO05D005706 3.2e-37 159.5 218 41.7
FvH4_6g28300 Fragaria vesca HOM05D004918 ORTHO05D005706 1.5e-34 150.6 151 55.0
CBR_g41678 Chara braunii HOM05D004918 ORTHO05D005706 3.1e-32 142.9 128 49.2
SMO351G0301 Selaginella moellendorffii HOM05D004918 ORTHO05D005706 4.4e-26 122.5 131 45.8
BcaC03g14995 Brassica carinata HOM05D004918 ORTHO05D005706 2.4e-24 116.7 67 79.1
BcaC05g25622 Brassica carinata HOM05D004918 ORTHO05D005706 2.6e-23 113.2 53 88.7
Gohir.D05G118400 Gossypium hirsutum HOM05D004918 ORTHO05D005706 4.5e-23 112.5 127 49.6
AagrBONN_evm.TU.Sc2ySwM_344.4108 Anthoceros agrestis HOM05D004918 ORTHO05D005706 1.1e-21 107.8 80 52.5
Os10g0200800 Oryza sativa ssp. japonica HOM05D004918 ORTHO05D005706 3.3e-18 96.3 58 62.1
CAN.G548.17 Capsicum annuum HOM05D002478 ORTHO05D005706 3.1e-16 89.7 59 62.7
CAN.G53.21 Capsicum annuum HOM05D002478 ORTHO05D020307 7.0e-16 88.6 56 64.3
CAN.G1986.5 Capsicum annuum HOM05D004918 ORTHO05D005706 1.2e-15 87.8 61 54.1
CAN.G829.5 Capsicum annuum HOM05D004534 ORTHO05D005706 3.5e-15 86.3 73 49.3
Zm00001eb002240 Zea mays HOM05D004918 ORTHO05D005706 4.2e-13 79.3 95 48.4
Cfa026120 Carpinus fangiana HOM05D004918 ORTHO05D125238 3.6e-12 76.3 152 31.6
AUR62034078 Chenopodium quinoa HOM05D004918 ORTHO05D005706 6.1e-12 75.5 52 65.4
Actinidia08937 Actinidia chinensis HOM05D004918 ORTHO05D005706 1.4e-11 74.3 49 65.3
AUR62012861 Chenopodium quinoa HOM05D004918 ORTHO05D005706 2.0e-10 70.5 51 62.7
CSS0035645 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 3.3e-10 69.7 102 47.1
Sed0005872 Sechium edule HOM05D004918 ORTHO05D005706 1.3e-09 67.8 97 43.3
MELO3C000966.2 Cucumis melo HOM05D004918 ORTHO05D005706 8.2e-09 65.1 102 38.2
MCO15G581 Micromonas commoda HOM05D004918 ORTHO05D005706 1.4e-08 64.3 158 27.2


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