Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g14110 Schrenkiella parvula HOM05D003936 ORTHO05D004747 2.5e-262 908.3 486 100.0
Thhalv10007635m.g Eutrema salsugineum HOM05D003936 ORTHO05D004747 6.7e-178 627.9 450 79.8
A06p11880 Brassica napus HOM05D003936 ORTHO05D004747 1.1e-156 557.4 456 75.2
CARHR016320 Cardamine hirsuta HOM05D003936 ORTHO05D004747 7.2e-156 554.7 477 66.5
BraA06t24358Z Brassica rapa HOM05D003936 ORTHO05D004747 9.3e-156 554.3 456 75.0
C05p14060 Brassica napus HOM05D003936 ORTHO05D004747 4.6e-155 552.0 455 74.1
BolC5t30137H Brassica oleracea HOM05D003936 ORTHO05D004747 1.0e-154 550.8 455 74.1
AL1G27960 Arabidopsis lyrata HOM05D003936 ORTHO05D004747 1.3e-149 533.9 452 67.7
Carub.0001s1560 Capsella rubella HOM05D003936 ORTHO05D004747 1.2e-147 527.3 447 68.0
AT1G15810 Arabidopsis thaliana HOM05D003936 ORTHO05D004747 6.9e-143 511.5 449 66.1
C08p44760 Brassica napus HOM05D003936 ORTHO05D004747 5.9e-142 508.4 449 64.6
BolC8t52022H Brassica oleracea HOM05D003936 ORTHO05D004747 3.2e-140 502.7 451 63.9
BcaC07g41479 Brassica carinata HOM05D003936 ORTHO05D004747 5.0e-133 478.8 444 62.8
BraA09t41490Z Brassica rapa HOM05D003936 ORTHO05D004747 7.2e-132 474.9 445 62.9
A09p61160 Brassica napus HOM05D003936 ORTHO05D004747 9.4e-132 474.6 445 62.7
Thhalv10018593m.g Eutrema salsugineum HOM05D003936 ORTHO05D004747 1.0e-106 391.3 450 54.2
Sp5g35150 Schrenkiella parvula HOM05D003936 ORTHO05D004747 4.0e-106 389.4 449 55.0
THA.LOC104812450 Tarenaya hassleriana HOM05D003936 ORTHO05D004747 8.3e-104 381.7 463 54.6
CARHR073900 Cardamine hirsuta HOM05D003936 ORTHO05D004747 1.7e-101 374.0 451 52.1
A07p45080 Brassica napus HOM05D003936 ORTHO05D004747 1.1e-100 371.3 450 53.6
BraA07t32011Z Brassica rapa HOM05D003936 ORTHO05D004747 2.5e-100 370.2 450 53.1
C06p53910 Brassica napus HOM05D003936 ORTHO05D004747 3.3e-100 369.8 449 53.2
BolC6t40405H Brassica oleracea HOM05D003936 ORTHO05D004747 3.3e-100 369.8 449 52.8
Aa31LG4G900 Aethionema arabicum HOM05D003936 ORTHO05D004747 5.6e-100 369.0 458 53.5
BolC2t09719H Brassica oleracea HOM05D003936 ORTHO05D004747 8.3e-96 355.1 449 51.2
BcaC03g15942 Brassica carinata HOM05D003936 ORTHO05D004747 5.4e-95 352.4 449 51.0
Carub.0002s2693 Capsella rubella HOM05D003936 ORTHO05D004747 1.6e-94 350.9 457 51.4
AT1G80620 Arabidopsis thaliana HOM05D003936 ORTHO05D004747 2.7e-94 350.1 450 52.0
BraA02t07326Z Brassica rapa HOM05D003936 ORTHO05D004747 1.5e-92 344.4 448 49.6
AL2G40830 Arabidopsis lyrata HOM05D003936 ORTHO05D004747 1.9e-92 344.0 474 48.9
A02p23300 Brassica napus HOM05D003936 ORTHO05D004747 5.6e-92 342.4 448 50.0
C02p37040 Brassica napus HOM05D003936 ORTHO05D004747 2.1e-91 340.5 449 50.3
Duzib212G0318 Durio zibethinus HOM05D003936 ORTHO05D004747 3.1e-90 336.7 461 49.2
BcaB05g25240 Brassica carinata HOM05D003936 ORTHO05D004747 2.0e-89 334.0 450 50.2
Sed0026159 Sechium edule HOM05D003936 ORTHO05D004747 2.9e-88 330.1 466 46.8
Cpa.g.sc10.123 Carica papaya HOM05D003936 ORTHO05D004747 1.9e-87 327.4 467 49.9
Dinv23312 Davidia involucrata HOM05D003936 ORTHO05D004747 6.0e-86 322.4 461 49.0
Thecc.06G036500 Theobroma cacao HOM05D003936 ORTHO05D004747 3.3e-84 316.6 459 47.9
TWI12G0163 Tripterygium wilfordii HOM05D003936 ORTHO05D004747 5.6e-84 315.8 467 44.5
Prupe.3G095300 Prunus persica HOM05D003936 ORTHO05D004747 1.1e-82 311.6 455 46.4
Actinidia25443 Actinidia chinensis HOM05D003936 ORTHO05D004747 1.8e-82 310.8 468 48.7
MELO3C017854.2 Cucumis melo HOM05D003936 ORTHO05D004747 3.4e-81 306.6 463 47.5
QL05p034110 Quercus lobata HOM05D003936 ORTHO05D004747 8.4e-80 302.0 464 47.2
Cfa001907 Carpinus fangiana HOM05D003936 ORTHO05D004747 1.1e-79 301.6 477 47.0
Actinidia18230 Actinidia chinensis HOM05D003936 ORTHO05D004747 2.4e-79 300.4 461 47.9
CiPaw.01G252100 Carya illinoinensis HOM05D003936 ORTHO05D004747 4.1e-79 299.7 476 47.1
CsaV3_4G001790 Cucumis sativus L. HOM05D003936 ORTHO05D004747 9.2e-79 298.5 471 43.7
Atru.chr10.2382 Acer truncatum HOM05D003936 ORTHO05D004747 1.2e-78 298.1 464 45.7
Gorai.010G223800 Gossypium raimondii HOM05D003936 ORTHO05D004747 1.6e-78 297.7 465 45.8
Lalb_Chr25g0279171 Lupinus albus HOM05D003936 ORTHO05D004747 1.3e-77 294.7 468 44.7
Ciclev10025627m.g Citrus clementina HOM05D003936 ORTHO05D004747 3.0e-77 293.5 467 45.2
Nn2g12258 Nelumbo nucifera HOM05D003936 ORTHO05D004747 3.9e-77 293.1 471 43.1
Gohir.D06G190700 Gossypium hirsutum HOM05D003936 ORTHO05D004747 6.6e-77 292.4 465 45.4
Eucgr.F03943 Eucalyptus grandis HOM05D003936 ORTHO05D004747 2.5e-76 290.4 475 43.4
CSS0006918 Camellia sinensis var. sinensis HOM05D003936 ORTHO05D004747 4.3e-76 289.7 483 46.8
TAR636G3155 Trochodendron aralioides HOM05D003936 ORTHO05D004747 3.6e-75 286.6 477 46.1
Gohir.A06G183700 Gossypium hirsutum HOM05D003936 ORTHO05D004747 5.2e-74 282.7 465 44.5
Sed0007390 Sechium edule HOM05D003936 ORTHO05D004747 2.6e-73 280.4 472 43.2
Sopen08g002790 Solanum pennellii HOM05D003936 ORTHO05D004747 3.4e-73 280.0 362 49.4
FvH4_6g28960 Fragaria vesca HOM05D003936 ORTHO05D004747 2.9e-72 276.9 453 47.7
arahy.Tifrunner.gnm1.ann1.17KRJ7 Arachis hypogaea HOM05D003936 ORTHO05D004747 8.4e-72 275.4 449 43.9
arahy.Tifrunner.gnm1.ann1.6RSI2J Arachis hypogaea HOM05D003936 ORTHO05D004747 8.4e-72 275.4 449 43.9
FAN14G5707 Fragaria x ananassa HOM05D003936 ORTHO05D004747 8.4e-72 275.4 464 46.8
Nitab4.5_0000114g0150 Nicotiana tabacum HOM05D003936 ORTHO05D004747 8.4e-72 275.4 387 49.4
RcHm_v2.0_Chr2g0133511 Rosa chinensis HOM05D003936 ORTHO05D004747 1.9e-71 274.2 455 45.5
Potri.003G178800 Populus trichocarpa HOM05D003936 ORTHO05D004747 2.4e-71 273.9 474 44.1
Solyc08g006840.3 Solanum lycopersicum HOM05D003936 ORTHO05D004747 2.4e-71 273.9 316 54.1
Rhsim08G0208400 Rhododendron simsii HOM05D003936 ORTHO05D004747 5.4e-71 272.7 493 40.2
PGR102G1525 Punica granatum HOM05D003936 ORTHO05D004747 9.3e-71 271.9 385 48.3
FAN02G3242 Fragaria x ananassa HOM05D003936 ORTHO05D004747 4.6e-70 269.6 476 45.4
MD17G1219800 Malus domestica HOM05D003936 ORTHO05D004747 1.0e-69 268.5 459 43.4
ClCG07G012350 Citrullus lanatus HOM05D003936 ORTHO05D004747 3.9e-69 266.5 539 40.6
FAN09G0504 Fragaria x ananassa HOM05D003936 ORTHO05D004747 5.1e-69 266.2 476 45.6
Glyma.07G026400 Glycine max HOM05D003936 ORTHO05D004747 5.1e-69 266.2 376 44.1
Ca_29510_v3 Cicer arietinum L. HOM05D003936 ORTHO05D004747 6.6e-69 265.8 469 42.0
FAN05G1488 Fragaria x ananassa HOM05D003936 ORTHO05D004747 6.6e-69 265.8 466 45.7
CANSAT11G1020 Cannabis sativa HOM05D003936 ORTHO05D004747 3.3e-68 263.5 453 42.8
MBI14_g15650_MAGBIO Magnolia biondii HOM05D003936 ORTHO05D004747 8.1e-67 258.8 364 46.4
VMungo0331G1494 Vigna mungo HOM05D003936 ORTHO05D004747 1.1e-66 258.5 370 44.9
Phvul.010G158900 Phaseolus vulgaris HOM05D003936 ORTHO05D004747 1.8e-66 257.7 272 53.7
vmacro19035 Vaccinium macrocarpon HOM05D003936 ORTHO05D004747 9.0e-66 255.4 339 48.7
CDE02G1505 Ceratophyllum demersum HOM05D003936 ORTHO05D004747 2.0e-65 254.2 408 42.2
RcHm_v2.0_Chr4g0407691 Rosa chinensis HOM05D003936 ORTHO05D004747 1.7e-64 251.1 454 45.8
MSTRG.11168 Avicennia marina HOM05D003936 ORTHO05D004747 2.2e-64 250.8 472 38.8
AUR62011450 Chenopodium quinoa HOM05D003936 ORTHO05D004747 2.9e-64 250.4 419 40.6
Peaxi162Scf00045g02127 Petunia axillaris HOM05D003936 ORTHO05D004747 2.9e-64 250.4 201 67.7
vmacro17364 Vaccinium macrocarpon HOM05D003936 ORTHO05D004747 3.8e-64 250.0 500 40.8
PSO210G7358 Papaver somniferum HOM05D003936 ORTHO05D004747 6.4e-64 249.2 356 46.1
Lj3g0027357 Lotus japonicus HOM05D003936 ORTHO05D004747 1.4e-63 248.1 235 60.9
TPR.G29720 Trifolium pratense HOM05D003936 ORTHO05D004747 3.2e-63 246.9 384 43.5
Psat7g258560 Pisum sativum HOM05D003936 ORTHO05D004747 7.1e-63 245.7 413 42.1
PSO478G0782 Papaver somniferum HOM05D003936 ORTHO05D004747 1.2e-62 245.0 345 45.8
Oeu029910.1 Olea europaea HOM05D003936 ORTHO05D004747 1.6e-62 244.6 484 40.3
Medtr4g009100 Medicago truncatula HOM05D003936 ORTHO05D004747 6.0e-62 242.7 417 41.7
COL.COLO4_11826 Corchorus olitorius HOM05D003936 ORTHO05D004747 1.0e-61 241.9 632 36.4
PSO782G4560 Papaver somniferum HOM05D003936 ORTHO05D004747 2.3e-61 240.7 348 45.7
Sabra03G0131100 Salix brachista HOM05D003936 ORTHO05D004747 3.9e-61 240.0 514 39.9
ATR0584G049 Amborella trichopoda HOM05D003936 ORTHO05D004747 6.7e-61 239.2 412 40.5
Cc04_g04830 Coffea canephora HOM05D003936 ORTHO05D004747 8.7e-61 238.8 241 58.1
AUR62016607 Chenopodium quinoa HOM05D003936 ORTHO05D004747 1.5e-60 238.0 418 40.4
unitig_27.g24954 Utricularia gibba HOM05D003936 ORTHO05D004747 1.5e-60 238.0 440 40.2
Aqoxy7G03521 Aquilegia oxysepala HOM05D003936 ORTHO05D004747 3.3e-60 236.9 419 38.7
Migut.I00724 Erythranthe guttata HOM05D003936 ORTHO05D004747 3.3e-60 236.9 412 43.9
EL10Ac9g21843 Beta vulgaris HOM05D003936 ORTHO05D004747 7.4e-60 235.7 426 41.1
FAN05G0608 Fragaria x ananassa HOM05D003936 ORTHO05D004747 7.4e-60 235.7 448 45.3
Hma1.2p1_0135F.1_g061770 Hydrangea macrophylla HOM05D003936 ORTHO05D004747 3.7e-59 233.4 363 45.5
DCAR_016286 Daucus carota HOM05D003936 ORTHO05D004747 6.2e-59 232.6 409 39.9
SGA_v2.0_scaffold5G02746 Striga asiatica HOM05D003936 ORTHO05D004747 1.8e-58 231.1 448 37.7
Lj2A141T58 Lonicera japonica HOM05D003936 ORTHO05D004747 4.0e-58 229.9 416 41.1
Lj9A496T67 Lonicera japonica HOM05D003936 ORTHO05D004747 1.5e-57 228.0 359 44.0
HanXRQChr16g0500031 Helianthus annuus HOM05D003936 ORTHO05D004747 2.0e-57 227.6 232 56.9
Os02g0803200 Oryza sativa ssp. japonica HOM05D003936 ORTHO05D004747 2.0e-57 227.6 364 42.0
Lsat_1_v5_gn_8_9281 Lactuca sativa HOM05D003936 ORTHO05D004747 4.5e-57 226.5 395 41.5
arahy.Tifrunner.gnm1.ann1.9YJ9LX Arachis hypogaea HOM05D003936 ORTHO05D004747 1.3e-56 224.9 328 43.9
arahy.Tifrunner.gnm1.ann1.ZV9XE5 Arachis hypogaea HOM05D003936 ORTHO05D004747 3.2e-55 220.3 366 40.2
Manes.04G106400 Manihot esculenta HOM05D003936 ORTHO05D004747 1.6e-54 218.0 442 42.1
HPP92_027846 Vanilla planifolia HOM05D003936 ORTHO05D004747 1.6e-54 218.0 406 38.7
GSVIVG01026722001 Vitis vinifera HOM05D003936 ORTHO05D004747 2.1e-54 217.6 135 79.3
Hund00590 Selenicereus undatus HOM05D003936 ORTHO05D004747 6.0e-54 216.1 429 40.1
Ah.02g127880 Amaranthus hybridus HOM05D003936 ORTHO05D004747 1.6e-51 208.0 433 37.2
ECA232G5052 Erigeron canadensis HOM05D003936 ORTHO05D004747 1.4e-50 204.9 374 39.0
Zm00001eb192140 Zea mays HOM05D003936 ORTHO05D004747 4.0e-50 203.4 204 54.9
AL1040U10010 Arabidopsis lyrata HOM05D003936 ORTHO05D004747 1.2e-49 201.8 112 88.4
RcHm_v2.0_Chr6g0246971 Rosa chinensis HOM05D003936 ORTHO05D004747 5.8e-49 199.5 254 51.6
MD09G1223400 Malus domestica HOM05D003936 ORTHO05D004747 1.4e-47 194.9 204 54.9
SalBow6G1756 Salvia bowleyana HOM05D003936 ORTHO05D004747 6.0e-46 189.5 454 35.9
SalBow6G6295 Salvia bowleyana HOM05D003936 ORTHO05D004747 6.0e-46 189.5 454 35.9
Sc10g0006130 Simmondsia chinensis HOM05D003936 ORTHO05D004747 1.3e-45 188.3 378 39.2
SHI11258 Sapria himalayana HOM05D003936 ORTHO05D004747 6.7e-45 186.0 423 37.4
Os06g0176150 Oryza sativa ssp. japonica HOM05D003936 ORTHO05D004747 2.8e-43 180.6 117 76.1
Os06g0177250 Oryza sativa ssp. japonica HOM05D003936 ORTHO05D004747 2.8e-43 180.6 117 76.1
QL08p064442 Quercus lobata HOM05D003936 ORTHO05D004747 1.2e-41 175.3 101 83.2
RcHm_v2.0_Chr2g0145231 Rosa chinensis HOM05D003936 ORTHO05D004747 4.6e-38 163.3 113 76.1
Dinv30485 Davidia involucrata HOM05D003936 ORTHO05D004747 5.1e-37 159.8 412 34.7
Nitab4.5_0012293g0020 Nicotiana tabacum HOM05D003936 ORTHO05D004747 3.3e-36 157.1 299 40.8
CDE09G1350 Ceratophyllum demersum HOM05D003936 ORTHO05D004747 7.4e-36 156.0 97 76.3
GSVIVG01026738001 Vitis vinifera HOM05D003936 ORTHO05D004747 1.7e-32 144.8 76 93.4
Mapoly0065s0028 Marchantia polymorpha HOM05D003936 ORTHO05D004747 2.5e-31 141.0 132 53.8
Pp3c1_21620 Physcomitrium patens HOM05D003936 ORTHO05D004747 9.4e-31 139.0 192 40.6
SEGI_32691 Sequoiadendron giganteum HOM05D003936 ORTHO05D004747 7.0e-26 122.9 224 39.3
BcaB05g25239 Brassica carinata HOM05D003936 ORTHO05D004747 2.6e-25 120.9 66 87.9
SMO164G0146 Selaginella moellendorffii HOM05D003936 ORTHO05D004747 8.5e-24 115.9 137 46.7
Zm00001eb320360 Zea mays HOM05D003936 ORTHO05D004747 3.0e-21 107.5 184 39.1
QL08p064447 Quercus lobata HOM05D003936 ORTHO05D004747 8.8e-21 105.9 340 33.8
PSO832G3729 Papaver somniferum HOM05D003936 ORTHO05D004747 2.4e-18 97.8 66 71.2
CiPaw.02G160600 Carya illinoinensis HOM05D003936 ORTHO05D004747 2.0e-17 94.7 311 34.1
CBR_g28520 Chara braunii HOM05D003936 ORTHO05D004747 4.5e-17 93.6 106 49.1
Nitab4.5_0009138g0020 Nicotiana tabacum HOM05D003936 ORTHO05D004747 5.9e-17 93.2 63 73.0
AagrBONN_evm.TU.Sc2ySwM_117.728 Anthoceros agrestis HOM05D003936 ORTHO05D004747 7.7e-17 92.8 94 53.2
MCO16G694 Micromonas commoda HOM05D003936 ORTHO05D003028 3.8e-16 90.5 105 45.7
RcHm_v2.0_Chr2g0171141 Rosa chinensis HOM05D003936 ORTHO05D004747 8.5e-16 89.4 56 80.4
CDE09G0364 Ceratophyllum demersum HOM05D003936 ORTHO05D004747 3.6e-14 84.0 249 32.1
AagrBONN_evm.TU.Sc2ySwM_368.3374 Anthoceros agrestis HOM05D003936 ORTHO05D004747 1.2e-12 79.0 92 48.9
Nitab4.5_0012293g0040 Nicotiana tabacum HOM05D003936 ORTHO05D004747 9.7e-12 75.9 37 91.9
Glyma.08G216000 Glycine max HOM05D003936 ORTHO05D004747 2.2e-08 64.7 37 70.3
EL10Ac7g16358 Beta vulgaris HOM05D003327 ORTHO05D004535 3.8e-08 63.9 50 62.0
Ca_25898_v3 Cicer arietinum L. HOM05D003936 ORTHO05D004747 1.1e-07 62.4 334 28.1
PRCOL_00001607 Prasinoderma coloniale HOM05D003936 ORTHO05D004747 1.1e-07 62.4 103 35.9
Cre17.g731250 Chlamydomonas reinhardtii HOM05D003936 ORTHO05D004747 1.5e-07 62.0 134 29.9
Ca_29111_v3 Cicer arietinum L. HOM05D003936 ORTHO05D004747 3.2e-07 60.8 66 51.5
SMO172G0122 Selaginella moellendorffii HOM05D003936 ORTHO05D004747 3.2e-07 60.8 67 52.2
Cre06.g264300 Chlamydomonas reinhardtii HOM05D003936 ORTHO05D004747 4.7e-06 57.0 90 40.0


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