Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 0.0e+00 1273.8 709 100.0
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 2.9e-259 898.7 736 72.8
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 2.1e-236 822.8 740 70.9
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 3.9e-235 818.5 733 71.8
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 3.4e-231 805.4 740 70.9
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 2.4e-229 799.3 735 69.4
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 3.0e-227 792.3 738 68.3
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 1.9e-210 736.5 731 63.1
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 3.2e-205 719.2 689 69.4
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 8.7e-203 711.1 733 64.0
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 6.2e-201 704.9 735 65.3
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.8e-184 650.2 757 57.3
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.7e-182 643.7 747 54.2
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 6.7e-179 631.7 746 57.2
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 5.7e-146 522.3 765 53.5
Aa31LG7G300 Aethionema arabicum HOM05D004831 ORTHO05D003975 3.8e-105 386.7 592 48.6
BcaB03g14531 Brassica carinata HOM05D004831 ORTHO05D017393 7.4e-69 266.2 465 45.4
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 2.6e-61 241.1 764 32.9
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 2.0e-58 231.5 733 32.2
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 5.9e-58 229.9 754 32.0
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 1.3e-57 228.8 741 32.5
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 1.3e-57 228.8 755 30.5
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 1.9e-56 224.9 804 30.2
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 4.2e-56 223.8 731 30.6
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 3.6e-55 220.7 734 30.9
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 8.8e-54 216.1 752 31.1
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 1.1e-53 215.7 770 31.4
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 1.5e-53 215.3 733 31.0
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 7.5e-53 213.0 771 30.0
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 1.7e-52 211.8 754 29.8
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 8.2e-52 209.5 773 30.8
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 5.3e-51 206.8 870 28.5
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 1.6e-50 205.3 770 29.7
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 7.7e-50 203.0 745 29.3
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 7.7e-50 203.0 759 29.4
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 7.7e-50 203.0 745 29.3
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 1.0e-49 202.6 913 28.8
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 1.3e-49 202.2 771 30.2
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 1.7e-49 201.8 759 29.5
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 2.2e-49 201.4 838 29.5
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 2.9e-49 201.1 798 28.8
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 5.0e-49 200.3 827 28.7
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 1.5e-48 198.7 833 28.8
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 4.2e-48 197.2 752 29.7
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 7.2e-48 196.4 740 31.6
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 9.4e-48 196.1 835 27.8
Aa31LG7G290 Aethionema arabicum HOM05D004831 ORTHO05D003975 9.4e-48 196.1 160 69.4
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 9.4e-48 196.1 756 29.0
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 3.6e-47 194.1 769 30.3
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 1.5e-45 188.7 738 29.9
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 2.6e-45 188.0 741 28.3
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 9.8e-45 186.0 696 30.0
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 1.4e-43 182.2 733 29.3
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 9.1e-43 179.5 929 26.4
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 5.9e-42 176.8 738 27.5
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 6.5e-41 173.3 732 26.9
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 5.5e-40 170.2 776 29.3
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 7.2e-40 169.9 730 28.2
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 3.6e-39 167.5 822 27.6
CiPaw.02G152200 Carya illinoinensis HOM05D004831 ORTHO05D003975 6.1e-39 166.8 422 35.3
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 1.0e-38 166.0 722 27.7
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 1.8e-38 165.2 751 30.6
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 4.0e-38 164.1 721 27.0
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 5.2e-38 163.7 684 29.1
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 5.7e-37 160.2 696 29.2
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 1.7e-36 158.7 697 28.8
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 2.2e-36 158.3 760 27.1
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 2.2e-36 158.3 812 26.4
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 6.3e-36 156.8 757 26.6
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 1.1e-35 156.0 777 28.7
Actinidia15826 Actinidia chinensis HOM05D004831 ORTHO05D003975 4.1e-35 154.1 362 34.0
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 4.1e-35 154.1 736 26.6
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 7.0e-35 153.3 684 28.5
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 1.2e-34 152.5 846 27.1
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 5.9e-34 150.2 766 26.1
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 7.7e-34 149.8 746 26.3
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 1.3e-33 149.1 783 26.9
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 3.8e-33 147.5 732 28.1
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 8.6e-33 146.4 731 27.9
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 1.1e-32 146.0 716 26.3
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 1.1e-32 146.0 850 25.8
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 1.9e-32 145.2 743 27.6
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 1.9e-32 145.2 655 26.3
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 4.3e-32 144.1 750 27.6
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 4.3e-32 144.1 758 26.0
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 5.6e-32 143.7 345 35.9
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 7.3e-32 143.3 854 24.7
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 9.5e-32 142.9 800 26.0
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 2.8e-31 141.4 639 27.2
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 1.0e-30 139.4 658 26.9
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 1.0e-30 139.4 655 27.2
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 1.0e-30 139.4 734 26.2
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 5.2e-30 137.1 929 23.9
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 6.8e-30 136.7 697 27.5
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 2.9e-28 131.3 725 24.4
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 1.2e-26 125.9 740 26.5
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 2.0e-26 125.2 357 31.1
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 3.9e-25 120.9 740 26.6
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 1.1e-24 119.4 786 25.4
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 1.9e-24 118.6 811 24.8
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 3.3e-24 117.9 757 26.2
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 3.3e-24 117.9 784 24.2
Actinidia15827 Actinidia chinensis HOM05D004831 ORTHO05D003975 5.6e-24 117.1 82 69.5
Haze_16453 Corylus avellana HOM05D004831 ORTHO05D003975 7.3e-24 116.7 570 26.8
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 7.3e-24 116.7 654 25.8
Sed0009949 Sechium edule HOM05D004831 ORTHO05D003975 2.1e-23 115.2 565 27.3
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 4.7e-23 114.0 662 25.8
Migut.I00846 Erythranthe guttata HOM05D004831 ORTHO05D003975 6.2e-23 113.6 355 29.3
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 3.1e-22 111.3 705 26.0
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 1.2e-21 109.4 76 69.7
PSO782G5420 Papaver somniferum HOM05D004831 ORTHO05D003975 5.8e-21 107.1 932 23.0
Psat4g139520 Pisum sativum HOM05D004831 ORTHO05D003975 7.5e-21 106.7 386 30.1
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 7.5e-21 106.7 75 69.3
COL.COLO4_30333 Corchorus olitorius HOM05D004831 ORTHO05D003975 2.2e-20 105.1 82 64.6
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 3.7e-20 104.4 774 25.8
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 4.9e-20 104.0 691 24.9
FAN02G3038 Fragaria x ananassa HOM05D004831 ORTHO05D003975 6.4e-20 103.6 654 25.2
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 8.3e-20 103.2 748 24.2
Manes.04G121450 Manihot esculenta HOM05D004831 ORTHO05D003975 1.6e-18 99.0 496 27.2
PSO063G2677 Papaver somniferum HOM05D004831 ORTHO05D003975 1.6e-18 99.0 951 22.4
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 1.3e-17 95.9 653 24.7
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 2.3e-17 95.1 928 23.0
AagrBONN_evm.TU.Sc2ySwM_368.483__484 Anthoceros agrestis HOM05D004831 ORTHO05D003975 5.0e-17 94.0 82 57.3
HPP92_017895 Vanilla planifolia HOM05D004831 ORTHO05D003975 5.0e-17 94.0 81 59.3
DCAR_026304 Daucus carota HOM05D004831 ORTHO05D003975 6.6e-17 93.6 74 60.8
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 1.1e-16 92.8 706 25.2
Migut.I00847 Erythranthe guttata HOM05D004831 ORTHO05D003975 2.8e-15 88.2 81 56.8
TPR.G24077 Trifolium pratense HOM05D004831 ORTHO05D003975 6.2e-15 87.0 79 60.8
Pp3c2_32580 Physcomitrium patens HOM05D004831 ORTHO05D003975 1.1e-14 86.3 84 52.4
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 1.4e-14 85.9 762 23.2
SMO203G0255 Selaginella moellendorffii HOM05D004831 ORTHO05D003975 4.0e-14 84.3 83 49.4
Os01g0617700 Oryza sativa ssp. japonica HOM05D004831 ORTHO05D003975 6.8e-14 83.6 81 51.9
Haze_24989 Corylus avellana HOM05D004831 ORTHO05D003975 2.0e-13 82.0 93 44.1
DCAR_009558 Daucus carota HOM05D004831 ORTHO05D003975 2.6e-13 81.6 377 26.8
Mapoly0008s0161 Marchantia polymorpha HOM05D004831 ORTHO05D003975 5.8e-13 80.5 78 53.8
ClCG05G013830 Citrullus lanatus HOM05D004831 ORTHO05D003975 2.2e-12 78.6 213 32.9
Pp3c5_11060 Physcomitrium patens HOM05D004831 ORTHO05D003975 6.4e-12 77.0 84 47.6
MD09G1215000 Malus domestica HOM05D004831 ORTHO05D003975 3.5e-10 71.2 144 34.7
SEGI_34595 Sequoiadendron giganteum HOM05D004831 ORTHO05D003975 2.3e-09 68.6 34 85.3
SHI09312 Sapria himalayana HOM05D004831 ORTHO05D003975 2.8e-07 61.6 108 34.3
Duzib192G1036 Durio zibethinus HOM05D004831 ORTHO05D003975 1.1e-06 59.7 328 27.7
Cpa.g.sc10.163 Carica papaya HOM05D004831 ORTHO05D003975 4.0e-06 57.8 55 60.0


User provided reference genes

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