Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g13640 Schrenkiella parvula HOM05D002526 ORTHO05D010157 1.2e-152 543.1 277 100.0
Thhalv10008365m.g Eutrema salsugineum HOM05D002526 ORTHO05D010157 1.6e-139 499.6 277 93.1
BolC5t30082H Brassica oleracea HOM05D002526 ORTHO05D010157 3.7e-133 478.4 270 91.1
BraA06t24312Z Brassica rapa HOM05D002526 ORTHO05D010157 2.4e-132 475.7 276 89.5
A06p11330 Brassica napus HOM05D002526 ORTHO05D010157 2.7e-131 472.2 277 89.5
Aa31LG7G90 Aethionema arabicum HOM05D002526 ORTHO05D010157 1.1e-129 466.8 276 86.2
AL1G27410 Arabidopsis lyrata HOM05D002526 ORTHO05D010157 2.5e-129 465.7 278 87.8
Carub.0001s1507 Capsella rubella HOM05D002526 ORTHO05D010157 4.3e-129 464.9 278 87.4
CARHR015850 Cardamine hirsuta HOM05D002526 ORTHO05D010157 1.3e-125 453.4 278 85.6
BcaC05g25469 Brassica carinata HOM05D002526 ORTHO05D010157 6.4e-125 451.1 270 87.8
AT1G15320 Arabidopsis thaliana HOM05D002526 ORTHO05D010157 1.0e-122 443.7 278 84.5
THA.LOC104812514 Tarenaya hassleriana HOM05D002526 ORTHO05D010157 3.0e-106 389.0 275 73.1
C05p13450 Brassica napus HOM05D002526 ORTHO05D010157 1.4e-87 327.0 183 91.8
TWI18G0347 Tripterygium wilfordii HOM05D002526 ORTHO05D010157 1.1e-71 274.2 266 54.5
CiPaw.01G248800 Carya illinoinensis HOM05D002526 ORTHO05D004039 2.3e-66 256.5 281 50.2
Dinv30612 Davidia involucrata HOM05D002526 ORTHO05D004039 8.7e-66 254.6 278 51.4
MD17G1213300 Malus domestica HOM05D002526 ORTHO05D010157 3.3e-65 252.7 255 52.5
CSS0025449 Camellia sinensis var. sinensis HOM05D002526 ORTHO05D004039 7.4e-65 251.5 242 55.4
Hma1.2p1_0242F.1_g100630 Hydrangea macrophylla HOM05D002526 ORTHO05D010157 7.4e-65 251.5 238 55.5
RcHm_v2.0_Chr2g0135091 Rosa chinensis HOM05D002526 ORTHO05D010157 1.3e-64 250.8 250 52.4
FvH4_6g29541 Fragaria vesca HOM05D002526 ORTHO05D010157 1.6e-64 250.4 240 52.9
FAN14G4319 Fragaria x ananassa HOM05D002526 ORTHO05D010157 1.6e-64 250.4 240 52.9
Atru.chr1.2906 Acer truncatum HOM05D002526 ORTHO05D010157 2.8e-64 249.6 275 51.6
Ciclev10024867m.g Citrus clementina HOM05D002526 ORTHO05D004039 6.3e-64 248.4 245 54.3
Potri.001G202300 Populus trichocarpa HOM05D002526 ORTHO05D010157 1.1e-63 247.7 259 52.9
Hund00650 Selenicereus undatus HOM05D002526 ORTHO05D010157 1.4e-63 247.3 246 53.7
Haze_16568 Corylus avellana HOM05D002526 ORTHO05D004039 2.4e-63 246.5 246 52.0
Prupe.3G088600 Prunus persica HOM05D002526 ORTHO05D010157 3.1e-63 246.1 257 51.0
Hund00651 Selenicereus undatus HOM05D002526 ORTHO05D010157 6.9e-63 245.0 246 53.3
Duzib192G0551 Durio zibethinus HOM05D002526 ORTHO05D010157 1.2e-62 244.2 228 57.9
QL03p020400 Quercus lobata HOM05D002526 ORTHO05D010157 2.0e-62 243.4 267 49.1
QL05p030835 Quercus lobata HOM05D002526 ORTHO05D010157 2.0e-62 243.4 267 49.1
Manes.04G112150 Manihot esculenta HOM05D002526 ORTHO05D004039 5.9e-62 241.9 269 50.9
Peaxi162Scf00332g00625 Petunia axillaris HOM05D002526 ORTHO05D010157 5.9e-62 241.9 241 53.5
GSVIVG01017348001 Vitis vinifera HOM05D002526 ORTHO05D004039 5.9e-62 241.9 233 53.6
Gohir.A05G122650 Gossypium hirsutum HOM05D002526 ORTHO05D010157 1.0e-61 241.1 218 57.8
Nn2g12105 Nelumbo nucifera HOM05D002526 ORTHO05D010157 1.3e-61 240.7 268 52.2
Gorai.009G127500 Gossypium raimondii HOM05D002526 ORTHO05D010157 8.5e-61 238.0 218 57.3
CANSAT56G1960 Cannabis sativa HOM05D002526 ORTHO05D010157 2.5e-60 236.5 244 52.9
vmacro19003 Vaccinium macrocarpon HOM05D002526 ORTHO05D010157 2.5e-60 236.5 240 52.9
COL.COLO4_11933 Corchorus olitorius HOM05D002526 ORTHO05D004039 2.1e-59 233.4 225 56.0
Thecc.06G028700 Theobroma cacao HOM05D002526 ORTHO05D010157 4.6e-59 232.3 247 53.4
BcaC03g16017 Brassica carinata HOM05D002526 ORTHO05D010157 1.8e-58 230.3 134 84.3
CAN.G407.78 Capsicum annuum HOM05D002526 ORTHO05D000105 3.9e-58 229.2 279 47.0
Nitab4.5_0003463g0050 Nicotiana tabacum HOM05D001442 ORTHO05D001369 3.9e-58 229.2 224 52.7
BcaC01g00573 Brassica carinata HOM05D002526 ORTHO05D010157 7.4e-57 224.9 133 85.0
Nitab4.5_0008560g0050 Nicotiana tabacum HOM05D001442 ORTHO05D010157 1.6e-56 223.8 261 47.1
C09p66980 Brassica napus HOM05D002526 ORTHO05D010157 3.7e-56 222.6 255 53.7
PGSC0003DMG400000622 Solanum tuberosum HOM05D002526 ORTHO05D010157 6.3e-56 221.9 228 50.9
Sopen03g035690 Solanum pennellii HOM05D002526 ORTHO05D010157 8.2e-56 221.5 236 49.6
BcaC02g09864 Brassica carinata HOM05D002526 ORTHO05D010157 1.1e-55 221.1 255 52.9
BolC4t25223H Brassica oleracea HOM05D002526 ORTHO05D010157 1.1e-55 221.1 255 52.9
Solyc03g116770.3 Solanum lycopersicum HOM05D002526 ORTHO05D010157 1.8e-55 220.3 236 49.2
C02p37700 Brassica napus HOM05D002526 ORTHO05D010157 2.4e-55 219.9 255 52.5
C04p35770 Brassica napus HOM05D002526 ORTHO05D010157 4.1e-55 219.2 255 52.5
BolC2t09789H Brassica oleracea HOM05D002526 ORTHO05D010157 6.9e-55 218.4 255 52.5
Lj5A73G68 Lonicera japonica HOM05D002526 ORTHO05D010157 9.0e-55 218.0 238 50.4
Cc04_g04450 Coffea canephora HOM05D002526 ORTHO05D010157 1.2e-54 217.6 209 57.4
Actinidia15756 Actinidia chinensis HOM05D002526 ORTHO05D010157 2.6e-54 216.5 242 50.8
C03p81490 Brassica napus HOM05D002526 ORTHO05D010157 2.2e-53 213.4 255 52.2
BolC3t20420H Brassica oleracea HOM05D002526 ORTHO05D010157 2.2e-53 213.4 255 52.2
AUR62016503 Chenopodium quinoa HOM05D002526 ORTHO05D010157 6.5e-53 211.8 237 51.1
SalBow2G1951 Salvia bowleyana HOM05D002526 ORTHO05D010157 8.5e-53 211.5 221 50.2
SGA_v2.0_scaffold5G02704 Striga asiatica HOM05D002526 ORTHO05D010157 8.5e-53 211.5 236 52.1
Oeu045127.1 Olea europaea HOM05D002526 ORTHO05D010157 1.1e-52 211.1 214 55.6
AUR62011678 Chenopodium quinoa HOM05D002526 ORTHO05D010157 4.2e-52 209.1 232 52.2
Aqoxy7G03644 Aquilegia oxysepala HOM05D002526 ORTHO05D010157 2.1e-51 206.8 240 48.8
EL10Ac9g22041 Beta vulgaris HOM05D002526 ORTHO05D010157 9.7e-49 198.0 235 49.4
Migut.I00757 Erythranthe guttata HOM05D002526 ORTHO05D010157 9.7e-49 198.0 260 45.8
Lsat_1_v5_gn_4_88500 Lactuca sativa HOM05D002526 ORTHO05D010157 6.9e-47 191.8 238 44.5
PGR102G2637 Punica granatum HOM05D002526 ORTHO05D010157 4.5e-46 189.1 258 44.6
FAN02G2169 Fragaria x ananassa HOM05D002526 ORTHO05D010157 5.9e-46 188.7 194 50.0
Gohir.D05G123550 Gossypium hirsutum HOM05D002526 ORTHO05D010157 5.9e-46 188.7 177 56.5
C03p75300 Brassica napus HOM05D002526 ORTHO05D010157 1.3e-45 187.6 255 48.6
Sc15g0001450 Simmondsia chinensis HOM05D002526 ORTHO05D010157 4.2e-44 182.6 224 47.3
ECA232G1362 Erigeron canadensis HOM05D002526 ORTHO05D010157 7.2e-44 181.8 261 42.5
Actinidia01740 Actinidia chinensis HOM05D002526 ORTHO05D010157 2.7e-43 179.9 230 47.4
DCAR_025516 Daucus carota HOM05D002526 ORTHO05D004039 1.8e-42 177.2 182 52.7
PSO161G0040 Papaver somniferum HOM05D002526 ORTHO05D010157 3.3e-41 172.9 223 45.7
Cpa.g.sc938.3 Carica papaya HOM05D002526 ORTHO05D010157 1.1e-39 167.9 213 45.1
Ah.01g021710 Amaranthus hybridus HOM05D002526 ORTHO05D010157 4.5e-38 162.5 226 42.0
BolC3t19789H Brassica oleracea HOM05D002526 ORTHO05D010157 2.2e-37 160.2 95 85.3
unitig_0.g1112 Utricularia gibba HOM05D002081 ORTHO05D002088 1.7e-32 144.1 213 40.4
FAN02G0105 Fragaria x ananassa HOM05D002526 ORTHO05D010157 1.6e-27 127.5 117 56.4
SEGI_27567 Sequoiadendron giganteum HOM05D002526 ORTHO05D010157 3.0e-18 96.7 203 29.6
SEGI_30845 Sequoiadendron giganteum HOM05D002526 ORTHO05D010157 1.5e-17 94.4 205 30.2
HPP92_021873 Vanilla planifolia HOM05D002526 ORTHO05D010157 1.6e-14 84.3 197 33.0
AagrBONN_evm.TU.Sc2ySwM_117.3641 Anthoceros agrestis HOM05D000382 ORTHO05D000623 2.2e-08 63.9 215 27.0
Solyc02g072570.2 Solanum lycopersicum HOM05D000828 ORTHO05D000623 5.4e-07 59.3 219 25.1
Sopen02g021540 Solanum pennellii HOM05D000828 ORTHO05D000623 9.2e-07 58.5 219 25.1
AUR62000548 Chenopodium quinoa HOM05D000828 ORTHO05D000623 1.2e-06 58.2 260 22.3
COL.COLO4_17538 Corchorus olitorius HOM05D000828 ORTHO05D000623 2.0e-06 57.4 208 27.4


User provided reference genes

Program Settings