Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 3.7e-183 644.8 340 100.0
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 8.8e-177 623.6 341 97.1
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 1.7e-175 619.4 340 95.3
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 2.2e-175 619.0 340 94.7
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 6.3e-175 617.5 341 95.6
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 2.4e-174 615.5 341 95.6
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 2.4e-174 615.5 341 95.6
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 7.0e-174 614.0 340 94.1
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 9.1e-174 613.6 340 94.4
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 4.8e-167 591.3 325 95.1
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 4.2e-163 578.2 341 90.0
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 2.4e-158 562.4 340 85.9
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 2.3e-148 529.3 329 82.7
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 2.5e-147 525.8 341 84.8
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 4.0e-145 518.5 336 80.7
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 4.1e-142 508.4 336 79.2
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 5.0e-140 501.5 336 78.9
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 6.6e-140 501.1 336 78.0
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 6.6e-140 501.1 333 76.0
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 1.1e-139 500.4 336 77.7
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 1.9e-139 499.6 330 77.9
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 2.5e-139 499.2 335 76.1
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 2.5e-139 499.2 336 77.7
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 3.3e-139 498.8 333 78.1
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 3.3e-139 498.8 336 77.4
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 5.6e-139 498.0 336 75.3
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 1.2e-138 496.9 332 77.4
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 8.0e-138 494.2 312 80.8
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 1.0e-137 493.8 336 77.1
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 4.0e-137 491.9 336 76.2
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 8.9e-137 490.7 332 76.5
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 1.2e-136 490.3 333 76.9
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 2.0e-136 489.6 333 76.9
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 2.0e-136 489.6 331 76.7
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 2.6e-136 489.2 325 78.2
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 3.4e-136 488.8 336 75.9
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 4.4e-136 488.4 336 76.5
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 4.4e-136 488.4 333 77.2
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 7.5e-136 487.6 338 74.0
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 1.3e-135 486.9 336 74.4
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 3.7e-135 485.3 336 74.1
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 1.4e-134 483.4 332 74.7
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 2.4e-134 482.6 333 74.5
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 3.2e-134 482.3 336 74.7
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 5.4e-134 481.5 332 75.6
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 7.0e-134 481.1 326 74.8
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 7.0e-134 481.1 336 74.1
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 9.2e-134 480.7 326 74.2
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 3.5e-133 478.8 373 70.0
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 6.0e-133 478.0 337 75.7
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 6.0e-133 478.0 337 72.7
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 1.0e-132 477.2 321 75.7
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 1.7e-132 476.5 333 73.3
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 2.3e-132 476.1 330 73.0
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 3.9e-132 475.3 330 73.0
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 1.9e-131 473.0 334 73.1
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 4.3e-131 471.9 353 72.0
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 7.3e-131 471.1 325 76.3
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 9.5e-131 470.7 336 74.4
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 2.8e-130 469.2 334 73.4
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 2.8e-130 469.2 336 72.6
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 1.1e-129 467.2 334 73.4
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 1.1e-129 467.2 321 74.1
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 3.1e-129 465.7 325 72.6
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 3.1e-129 465.7 333 73.3
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 4.0e-129 465.3 334 73.1
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 4.0e-129 465.3 334 73.1
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 5.2e-129 464.9 333 73.0
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 6.8e-129 464.5 333 72.4
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 5.8e-128 461.5 344 69.2
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 1.9e-126 456.4 336 69.0
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 1.2e-125 453.8 332 70.2
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 2.3e-124 449.5 336 71.7
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 6.6e-124 448.0 326 71.5
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 8.6e-124 447.6 340 67.6
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 6.8e-121 438.0 357 66.9
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 2.2e-119 433.0 394 62.4
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 3.2e-118 429.1 336 70.2
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 5.4e-118 428.3 336 67.0
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 3.5e-117 425.6 321 68.5
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 1.5e-115 420.2 336 66.1
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 7.3e-115 417.9 298 72.5
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 3.6e-114 415.6 282 75.2
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 2.5e-107 392.9 333 63.1
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 8.1e-106 387.9 336 63.7
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 2.0e-104 383.3 340 61.5
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 7.6e-104 381.3 345 60.6
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 1.5e-96 357.1 333 54.4
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 7.6e-96 354.8 331 56.5
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 1.3e-95 354.0 252 71.8
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 1.8e-89 333.6 321 54.2
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 1.4e-86 323.9 242 68.2
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 2.5e-83 313.2 197 78.2
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 4.3e-83 312.4 326 51.2
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 7.4e-83 311.6 206 77.2
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 5.5e-78 295.4 326 48.2
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 8.7e-76 288.1 201 74.1
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 1.5e-72 277.3 181 76.8
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 7.2e-70 268.5 370 48.1
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 7.9e-69 265.0 332 46.1
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 7.4e-67 258.5 359 41.8
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 6.3e-66 255.4 241 59.8
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.4e-65 254.2 326 43.6
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 9.1e-57 224.9 175 64.6
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 1.4e-49 201.1 149 71.8
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 2.6e-48 196.8 174 51.7
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.7e-39 167.5 283 41.0
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 2.2e-39 167.2 305 40.0
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 2.5e-38 163.7 343 32.4
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 2.3e-36 157.1 126 68.3
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 2.8e-34 150.2 124 63.7
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 1.1e-30 138.3 86 80.2
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 3.3e-22 110.2 332 28.3
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 2.8e-21 107.1 74 64.9
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 6.2e-13 79.3 142 41.5
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 6.2e-13 79.3 142 41.5
SEGI_31629 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 1.4e-12 78.2 59 72.9


User provided reference genes

Program Settings