Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 1.1e-297 1026.2 613 100.0
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 6.8e-228 794.3 614 77.0
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 1.5e-227 793.1 613 75.9
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 7.7e-224 780.8 614 73.3
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 3.8e-223 778.5 618 76.4
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 1.4e-217 760.0 613 74.9
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.4e-212 743.4 602 71.6
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 5.2e-212 741.5 616 71.9
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 1.3e-210 736.9 616 72.7
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 3.2e-209 732.3 612 70.9
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 7.5e-203 711.1 593 71.2
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 7.6e-155 551.6 640 55.2
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 4.6e-152 542.3 650 53.4
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 3.7e-141 506.1 613 53.0
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 7.2e-121 438.7 667 44.8
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 4.7e-120 436.0 659 44.9
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.2e-118 431.4 670 43.9
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 1.7e-117 427.6 672 41.8
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 2.0e-115 420.6 656 42.8
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 2.7e-115 420.2 663 43.4
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 5.9e-115 419.1 662 42.7
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 1.7e-114 417.5 654 43.4
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 2.2e-114 417.2 639 44.0
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 1.1e-113 414.8 666 43.7
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 4.2e-113 412.9 674 43.8
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 1.6e-112 411.0 653 44.1
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 1.1e-108 398.3 634 45.1
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 1.0e-106 391.7 665 41.5
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 1.8e-103 380.9 672 42.1
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 2.3e-103 380.6 647 41.0
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 4.0e-103 379.8 663 37.9
Thhalv10001133m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 4.4e-102 376.3 569 46.7
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 5.7e-102 375.9 667 42.9
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 4.9e-101 372.9 640 41.1
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 6.4e-101 372.5 651 39.2
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 1.8e-100 370.9 632 42.4
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 1.8e-100 370.9 673 40.7
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 4.1e-100 369.8 630 40.3
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 5.4e-100 369.4 639 39.1
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 2.0e-99 367.5 640 41.6
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 4.6e-99 366.3 649 36.5
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 7.8e-99 365.5 651 37.2
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 1.0e-98 365.2 643 36.7
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 1.3e-98 364.8 664 39.3
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 3.9e-98 363.2 631 39.8
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 6.6e-98 362.5 649 38.4
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 1.9e-97 360.9 632 40.2
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 9.5e-97 358.6 631 39.1
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 1.6e-96 357.8 644 36.6
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.6e-96 357.8 660 37.6
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 4.7e-96 356.3 631 39.1
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 8.0e-96 355.5 635 40.8
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 2.3e-95 354.0 666 39.5
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 4.4e-94 349.7 648 38.1
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.3e-93 348.2 634 36.4
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 4.1e-92 343.2 666 38.7
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 1.9e-89 334.3 632 36.7
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 4.3e-89 333.2 651 39.2
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 4.3e-89 333.2 673 36.3
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 7.3e-89 332.4 630 36.2
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 9.5e-89 332.0 675 38.4
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 1.2e-88 331.6 625 40.3
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 1.6e-88 331.3 659 37.8
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 1.1e-87 328.6 671 37.6
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 1.8e-87 327.8 689 37.3
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 1.8e-87 327.8 582 43.3
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 1.8e-87 327.8 643 39.5
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 8.9e-87 325.5 527 43.6
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 1.2e-86 325.1 652 36.7
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 3.4e-86 323.6 620 39.5
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 3.4e-86 323.6 636 39.0
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 1.0e-82 312.0 628 37.6
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 1.7e-82 311.2 676 37.4
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 3.3e-81 307.0 636 37.9
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 1.2e-80 305.1 648 37.8
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 8.9e-79 298.9 635 38.9
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 2.6e-78 297.4 648 36.0
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 1.7e-77 294.7 642 35.5
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 6.4e-77 292.7 642 35.7
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 5.4e-76 289.7 619 37.0
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 1.6e-75 288.1 632 34.7
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 2.1e-75 287.7 639 40.4
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 3.5e-75 287.0 650 37.7
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 7.3e-73 279.3 637 36.9
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 1.2e-72 278.5 707 33.4
BolC5t29767H Brassica oleracea HOM05D003570 ORTHO05D004207 1.5e-70 271.6 264 58.3
BolC4t26878H Brassica oleracea HOM05D003570 ORTHO05D004207 9.9e-70 268.9 197 78.7
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 1.6e-67 261.5 640 34.2
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 3.0e-66 257.3 485 40.4
C04p53310 Brassica napus HOM05D003570 ORTHO05D004207 2.8e-64 250.8 202 74.3
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 6.2e-64 249.6 569 35.5
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 2.0e-62 244.6 544 35.1
Dinv11043 Davidia involucrata HOM05D003570 ORTHO05D004207 1.4e-60 238.4 456 42.8
EL10As2g23162 Beta vulgaris HOM05D003570 ORTHO05D004207 2.4e-60 237.7 494 39.1
A07p19900 Brassica napus HOM05D003570 ORTHO05D004207 4.2e-60 236.9 198 70.2
BcaC05g25084 Brassica carinata HOM05D003570 ORTHO05D004207 5.4e-60 236.5 176 69.3
BcaC05g25085 Brassica carinata HOM05D003570 ORTHO05D004207 3.5e-59 233.8 287 55.4
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 6.0e-59 233.0 658 31.8
Sabra08G0139700 Salix brachista HOM05D003570 ORTHO05D004207 6.0e-59 233.0 338 42.6
Zm00001eb062020 Zea mays HOM05D003570 ORTHO05D004207 1.3e-58 231.9 531 36.9
BcaC02g08536 Brassica carinata HOM05D003570 ORTHO05D004207 1.8e-58 231.5 162 79.0
Os02g0596100 Oryza sativa ssp. japonica HOM05D003570 ORTHO05D004207 1.8e-58 231.5 633 34.8
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 7.4e-57 226.1 531 37.1
C05p10220 Brassica napus HOM05D003570 ORTHO05D004207 1.1e-55 222.2 260 52.3
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 1.8e-55 221.5 622 33.4
AL2G22720 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 2.2e-53 214.5 128 83.6
vmacro17618 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 2.4e-52 211.1 537 33.3
A07p18160 Brassica napus HOM05D003570 ORTHO05D004207 4.2e-52 210.3 198 61.1
BraA01t00580Z Brassica rapa HOM05D003570 ORTHO05D004207 4.2e-52 210.3 198 61.1
BcaC06g34341 Brassica carinata HOM05D003570 ORTHO05D004207 6.0e-51 206.5 196 60.2
C04p53220 Brassica napus HOM05D003570 ORTHO05D004207 1.0e-50 205.7 152 77.6
Pp3c9_21420 Physcomitrium patens HOM05D003570 ORTHO05D004207 5.6e-49 199.9 628 30.7
PSO063G1535 Papaver somniferum HOM05D003570 ORTHO05D004207 8.1e-48 196.1 302 38.1
PSO754G0035 Papaver somniferum HOM05D003570 ORTHO05D004207 5.3e-47 193.4 353 36.0
Aqoxy5G03688 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 1.3e-45 188.7 233 46.8
Rhsim12G0107900 Rhododendron simsii HOM05D003570 ORTHO05D004207 1.3e-45 188.7 247 46.2
AT4G05523 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 4.9e-45 186.8 218 55.0
Oeu038646.1 Olea europaea HOM05D003570 ORTHO05D004207 1.4e-44 185.3 442 34.2
vmacro16171 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.2e-43 182.2 252 41.3
Rhsim12G0108000 Rhododendron simsii HOM05D003570 ORTHO05D004207 2.1e-43 181.4 257 40.5
Lj3A151T25 Lonicera japonica HOM05D003570 ORTHO05D004207 2.7e-43 181.0 377 33.7
PGSC0003DMG400016968 Solanum tuberosum HOM05D003570 ORTHO05D004207 1.8e-42 178.3 257 40.5
Hma1.2p1_1533F.1_g289360 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 9.6e-41 172.6 256 39.5
Nitab4.5_0000229g0040 Nicotiana tabacum HOM05D003570 ORTHO05D004207 2.1e-40 171.4 236 43.2
vmacro16170 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 4.8e-40 170.2 233 42.5
Dinv15203 Davidia involucrata HOM05D003570 ORTHO05D004207 3.4e-38 164.1 219 41.6
SMO367G0645 Selaginella moellendorffii HOM05D003570 ORTHO05D004207 7.6e-38 162.9 637 28.4
Aqoxy1G03220 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 5.0e-37 160.2 243 42.0
FAN08G0154 Fragaria x ananassa HOM05D003570 ORTHO05D004207 5.5e-36 156.8 444 31.1
AL2G22730 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 9.3e-36 156.0 116 69.0
Nitab4.5_0000229g0020 Nicotiana tabacum HOM05D003570 ORTHO05D004207 1.6e-35 155.2 343 36.7
Mapoly0004s0250 Marchantia polymorpha HOM05D003570 ORTHO05D004207 4.3e-33 147.1 650 28.0
vmacro16173 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 2.2e-32 144.8 248 33.5
CSS0031984 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 1.4e-31 142.1 236 37.7
Sp2g10400 Schrenkiella parvula HOM05D003570 ORTHO05D004207 9.1e-31 139.4 173 50.9
vmacro16172 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 4.5e-30 137.1 301 32.2
CBR_g38118 Chara braunii HOM05D003570 ORTHO05D004207 2.9e-29 134.4 561 30.5
CDE06G1553 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 1.9e-28 131.7 180 39.4
Haze_11814 Corylus avellana HOM05D001314 ORTHO05D001165 7.2e-28 129.8 186 40.9
unitig_22.g6426 Utricularia gibba HOM05D003570 ORTHO05D004207 1.4e-26 125.6 179 40.2
Aqoxy5G03687 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 2.3e-26 124.8 243 40.7
Haze_20779 Corylus avellana HOM05D003570 ORTHO05D004207 1.1e-25 122.5 224 37.1
CARHR253470 Cardamine hirsuta HOM05D003570 ORTHO05D004207 1.5e-25 122.1 151 56.3
C07p30160 Brassica napus HOM05D003570 ORTHO05D004207 2.2e-24 118.2 71 80.3
C03p39130 Brassica napus HOM05D003570 ORTHO05D004207 4.8e-24 117.1 101 65.3
FAN13G1935 Fragaria x ananassa HOM05D003570 ORTHO05D004207 5.3e-23 113.6 361 37.4
Lj3A151T24 Lonicera japonica HOM05D003570 ORTHO05D004207 6.9e-23 113.2 130 48.5
C07p30170 Brassica napus HOM05D003570 ORTHO05D004207 2.0e-22 111.7 70 82.9
CSS0045431 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 3.8e-21 107.5 150 43.3
Hma1.2p1_1533F.1_g289350 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 1.9e-20 105.1 154 41.6
Cre06.g300900 Chlamydomonas reinhardtii HOM05D003570 ORTHO05D004207 1.2e-19 102.4 230 28.7
MCO05G059 Micromonas commoda HOM05D003570 ORTHO05D004207 2.1e-19 101.7 190 32.6
AagrBONN_evm.TU.Sc2ySwM_362.2178 Anthoceros agrestis HOM05D003570 ORTHO05D004207 2.7e-19 101.3 171 31.6
BolC4t26886H Brassica oleracea HOM05D003570 ORTHO05D004207 6.1e-19 100.1 65 75.4
C02p46270 Brassica napus HOM05D003570 ORTHO05D027618 2.3e-18 98.2 220 42.3
BraA02t07950Z Brassica rapa HOM05D003570 ORTHO05D027618 2.6e-17 94.7 221 42.5
EL10Ac8g19584 Beta vulgaris HOM05D003570 ORTHO05D004207 3.3e-17 94.4 121 43.8
FAN08G3485 Fragaria x ananassa HOM05D003570 ORTHO05D004207 4.4e-17 94.0 118 42.4
A02p29200 Brassica napus HOM05D003570 ORTHO05D027618 5.7e-17 93.6 220 41.8
unitig_22.g6425 Utricularia gibba HOM05D003570 ORTHO05D004207 7.4e-17 93.2 274 32.5
Sopen04g013730 Solanum pennellii HOM05D003570 ORTHO05D004207 3.7e-16 90.9 124 39.5
BcaC02g12092 Brassica carinata HOM05D003570 ORTHO05D004207 4.8e-16 90.5 57 75.4
CDE06G0651 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 2.0e-14 85.1 237 39.2
Medtr7g034350 Medicago truncatula HOM05D003570 ORTHO05D004207 5.9e-14 83.6 162 33.3
Glyma.18G013000 Glycine max HOM05D003570 ORTHO05D004207 1.7e-13 82.0 86 48.8
TAR374G0522 Trochodendron aralioides HOM05D003570 ORTHO05D004207 1.9e-12 78.6 93 44.1
TAR374G0931 Trochodendron aralioides HOM05D003570 ORTHO05D004207 4.2e-12 77.4 119 40.3
PSO063G3896 Papaver somniferum HOM05D003570 ORTHO05D004207 6.1e-11 73.6 232 34.9
FvH4_5g15750 Fragaria vesca HOM05D003570 ORTHO05D004207 1.8e-10 72.0 71 53.5
BcaC03g16752 Brassica carinata HOM05D003570 ORTHO05D027618 6.7e-10 70.1 218 30.7
PRCOL_00001147 Prasinoderma coloniale HOM05D003570 ORTHO05D004207 6.7e-10 70.1 198 27.3
EL10As2g23164 Beta vulgaris HOM05D003570 ORTHO05D004207 2.6e-09 68.2 165 33.9
MD05G1151500 Malus domestica HOM05D003570 ORTHO05D004207 1.7e-08 65.5 51 62.7
AagrBONN_evm.TU.Sc2ySwM_344.4464 Anthoceros agrestis HOM05D003570 ORTHO05D004207 6.3e-08 63.5 368 26.6
Hma1.2p1_0054F.1_g030990 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 1.4e-07 62.4 64 45.3
FAN18G0384 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.4e-07 61.6 153 27.5
FvH4_5g15741 Fragaria vesca HOM05D003570 ORTHO05D004207 5.3e-07 60.5 151 27.2
CDE06G1606 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 7.0e-07 60.1 72 38.9
EL10Ac1g01653 Beta vulgaris HOM05D003570 ORTHO05D004207 4.5e-06 57.4 51 54.9
Actinidia15112 Actinidia chinensis HOM05D003570 ORTHO05D004207 5.9e-06 57.0 67 46.3
Hund04894 Selenicereus undatus HOM05D003570 ORTHO05D004207 5.9e-06 57.0 65 43.1
Actinidia15111 Actinidia chinensis HOM05D003570 ORTHO05D004207 7.7e-06 56.6 67 38.8


User provided reference genes

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