Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g11260 Schrenkiella parvula HOM05D007482 ORTHO05D003038 1.8e-58 229.2 126 100.0
C08p47210 Brassica napus HOM05D007482 ORTHO05D003038 3.4e-33 145.2 130 70.0
BolC8t52260H Brassica oleracea HOM05D007482 ORTHO05D003038 1.7e-32 142.9 133 66.9
BraA09t41719Z Brassica rapa HOM05D007482 ORTHO05D003038 2.4e-31 139.0 132 67.4
A09p63710 Brassica napus HOM05D007482 ORTHO05D003038 7.1e-31 137.5 136 65.4
Thhalv10009942m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 8.6e-29 130.6 100 63.0
Sp1g11270 Schrenkiella parvula HOM05D007482 ORTHO05D003038 6.4e-24 114.4 127 46.5
Thhalv10023017m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 1.4e-23 113.2 118 50.0
BcaB08g34258 Brassica carinata HOM05D007482 ORTHO05D003038 2.7e-22 109.0 125 44.8
A09p63700 Brassica napus HOM05D007482 ORTHO05D003038 4.6e-22 108.2 129 45.7
BraA09t41718Z Brassica rapa HOM05D007482 ORTHO05D003038 7.8e-22 107.5 129 45.0
C08p47190 Brassica napus HOM05D007482 ORTHO05D003038 1.3e-21 106.7 117 49.6
C08p47200 Brassica napus HOM05D007482 ORTHO05D003038 1.3e-21 106.7 129 44.2
AT1G12663 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 2.3e-21 105.9 118 47.5
AL1G24130 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 6.6e-21 104.4 119 48.7
BcaB08g34257 Brassica carinata HOM05D007482 ORTHO05D003038 4.3e-20 101.7 110 47.3
CARHR035990 Cardamine hirsuta HOM05D007482 ORTHO05D003038 7.3e-20 100.9 125 44.8
A09p35330 Brassica napus HOM05D007482 ORTHO05D003038 1.3e-19 100.1 128 44.5
C05p30030 Brassica napus HOM05D007482 ORTHO05D003038 1.6e-19 99.8 129 44.2
BolC5t31740H Brassica oleracea HOM05D007482 ORTHO05D003038 1.6e-19 99.8 129 44.2
CARHR012950 Cardamine hirsuta HOM05D007482 ORTHO05D003038 4.8e-19 98.2 126 42.9
AL1G24150 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 6.2e-19 97.8 86 60.5
CARHR012960 Cardamine hirsuta HOM05D007482 ORTHO05D003038 1.1e-18 97.1 125 42.4
BraA09t39063Z Brassica rapa HOM05D007482 ORTHO05D003038 1.8e-18 96.3 128 43.8
AL1G24160 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 3.1e-18 95.5 124 41.1
C05p44560 Brassica napus HOM05D007482 ORTHO05D003038 5.3e-18 94.7 122 44.3
BolC5t33183H Brassica oleracea HOM05D007482 ORTHO05D003038 2.6e-17 92.4 122 43.4
BraA05t21798Z Brassica rapa HOM05D007482 ORTHO05D003038 2.6e-17 92.4 122 43.4
Carub.0004s0495 Capsella rubella HOM05D007482 ORTHO05D003038 4.4e-17 91.7 135 42.2
BcaB08g34259 Brassica carinata HOM05D007482 ORTHO05D003038 7.6e-17 90.9 126 41.3
BcaB08g34260 Brassica carinata HOM05D007482 ORTHO05D003038 7.6e-17 90.9 126 42.1
A05p29150 Brassica napus HOM05D007482 ORTHO05D003038 7.6e-17 90.9 122 42.6
C08p47220 Brassica napus HOM05D007482 ORTHO05D003038 7.6e-17 90.9 126 41.3
BolC8t52261H Brassica oleracea HOM05D007482 ORTHO05D003038 7.6e-17 90.9 126 41.3
BcaC01g02807 Brassica carinata HOM05D007482 ORTHO05D003038 9.9e-17 90.5 126 42.9
C03p60060 Brassica napus HOM05D007482 ORTHO05D003038 9.9e-17 90.5 126 42.9
AT1G12660 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 1.3e-16 90.1 126 43.7
BolC8t52262H Brassica oleracea HOM05D007482 ORTHO05D003038 1.7e-16 89.7 126 40.5
Thhalv10009133m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 4.9e-16 88.2 117 44.4
BcaC05g25121 Brassica carinata HOM05D007482 ORTHO05D003038 6.4e-16 87.8 125 43.2
A06p32510 Brassica napus HOM05D007482 ORTHO05D003038 8.4e-16 87.4 126 42.1
Carub.0001s1239 Capsella rubella HOM05D007482 ORTHO05D003038 1.1e-15 87.0 130 40.8
Carub.0001s1235 Capsella rubella HOM05D007482 ORTHO05D003038 1.4e-15 86.7 126 42.1
BcaC05g28380 Brassica carinata HOM05D007482 ORTHO05D003038 1.9e-15 86.3 107 44.9
A09p63720 Brassica napus HOM05D007482 ORTHO05D003038 5.4e-15 84.7 126 39.7
BraA09t41720Z Brassica rapa HOM05D007482 ORTHO05D003038 5.4e-15 84.7 126 39.7
A09p35320 Brassica napus HOM05D007482 ORTHO05D003038 9.3e-15 84.0 122 42.6
CARHR012980 Cardamine hirsuta HOM05D007482 ORTHO05D003038 9.3e-15 84.0 126 43.7
Carub.0001s1238 Capsella rubella HOM05D007482 ORTHO05D003038 1.2e-14 83.6 125 39.2
BolC8t52259H Brassica oleracea HOM05D007482 ORTHO05D003038 2.1e-14 82.8 111 42.3
Sp1g11250 Schrenkiella parvula HOM05D007482 ORTHO05D003038 3.5e-14 82.0 126 39.7
CARHR182820 Cardamine hirsuta HOM05D007482 ORTHO05D003038 6.0e-14 81.3 91 45.1
Carub.0001s1236 Capsella rubella HOM05D007482 ORTHO05D003038 1.0e-13 80.5 125 44.8
C05p30070 Brassica napus HOM05D007482 ORTHO05D003038 1.7e-13 79.7 122 41.0
BolC5t29803H Brassica oleracea HOM05D007482 ORTHO05D003038 2.3e-13 79.3 151 46.4
THA.LOC104823572 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 2.3e-13 79.3 124 36.3
BraA09t39062Z Brassica rapa HOM05D007482 ORTHO05D003038 5.1e-13 78.2 110 42.7
C05p10610 Brassica napus HOM05D007482 ORTHO05D003038 8.7e-13 77.4 151 45.7
C05p44570 Brassica napus HOM05D007482 ORTHO05D003038 1.5e-12 76.6 118 39.0
BolC5t33184H Brassica oleracea HOM05D007482 ORTHO05D003038 1.5e-12 76.6 118 39.0
BcaB07g32750 Brassica carinata HOM05D007482 ORTHO05D003038 2.5e-12 75.9 108 39.8
A05p29160 Brassica napus HOM05D007482 ORTHO05D003038 2.5e-12 75.9 112 43.8
AL1G24120 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 5.6e-12 74.7 119 38.7
BraA09t41717Z Brassica rapa HOM05D007482 ORTHO05D003038 5.6e-12 74.7 51 62.7
Thhalv10009322m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 7.4e-12 74.3 102 43.1
A06p09020 Brassica napus HOM05D007482 ORTHO05D003038 1.6e-11 73.2 115 41.7
BraA06t24091Z Brassica rapa HOM05D007482 ORTHO05D003038 1.6e-11 73.2 115 41.7
BraA06t26175Z Brassica rapa HOM05D007482 ORTHO05D003038 1.6e-11 73.2 105 41.0
A09p63730 Brassica napus HOM05D007482 ORTHO05D003038 2.1e-11 72.8 105 40.0
C08p47180 Brassica napus HOM05D007482 ORTHO05D003038 2.1e-11 72.8 121 38.0
BolC3t18270H Brassica oleracea HOM05D007482 ORTHO05D003038 2.1e-11 72.8 105 41.0
BolC8t52263H Brassica oleracea HOM05D007482 ORTHO05D003038 2.1e-11 72.8 117 36.8
BcaC05g25122 Brassica carinata HOM05D007482 ORTHO05D003038 2.8e-11 72.4 126 37.3
C05p10620 Brassica napus HOM05D007482 ORTHO05D003038 4.8e-11 71.6 127 40.2
BolC5t29804H Brassica oleracea HOM05D007482 ORTHO05D003038 4.8e-11 71.6 127 40.2
Manes.04G122400 Manihot esculenta HOM05D005672 ORTHO05D003038 3.1e-10 68.9 125 36.0
C08p47230 Brassica napus HOM05D007482 ORTHO05D003038 5.3e-10 68.2 105 38.1
BraA05t21800Z Brassica rapa HOM05D007482 ORTHO05D003038 5.3e-10 68.2 112 42.0
Thhalv10009569m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 9.0e-10 67.4 113 37.2
AT1G12672 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 1.2e-09 67.0 118 34.7
CARHR012970 Cardamine hirsuta HOM05D007482 ORTHO05D003038 2.6e-09 65.9 127 33.9
BolC5t31743H Brassica oleracea HOM05D007482 ORTHO05D003038 5.8e-09 64.7 104 39.4
Duzib160G0695 Durio zibethinus HOM05D005672 ORTHO05D003038 7.6e-09 64.3 114 33.3
Carub.0002s1663 Capsella rubella HOM05D007482 ORTHO05D003038 1.3e-08 63.5 125 30.4
ECA232G2097 Erigeron canadensis HOM05D005672 ORTHO05D003038 4.9e-08 61.6 130 35.4
FAN05G0478 Fragaria x ananassa HOM05D005672 ORTHO05D003038 4.9e-08 61.6 97 35.1
PSO339G2623 Papaver somniferum HOM05D007482 ORTHO05D003038 1.1e-07 60.5 128 32.0
BolC8t52257H Brassica oleracea HOM05D007482 ORTHO05D003038 2.4e-07 59.3 46 58.7
Duzib192G0432 Durio zibethinus HOM05D005672 ORTHO05D003038 2.4e-07 59.3 114 31.6
Duzib192G0507 Durio zibethinus HOM05D005672 ORTHO05D003038 2.4e-07 59.3 114 31.6
Duzib192G0711 Durio zibethinus HOM05D005672 ORTHO05D003038 2.4e-07 59.3 114 31.6
CARHR035980 Cardamine hirsuta HOM05D007482 ORTHO05D003038 3.2e-07 58.9 59 47.5
Thhalv10017433m.g Eutrema salsugineum HOM05D007482 ORTHO05D016827 4.2e-07 58.5 126 32.5
AL1G24140 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 5.5e-07 58.2 60 55.0
Prupe.3G072800 Prunus persica HOM05D005672 ORTHO05D003038 5.5e-07 58.2 125 33.6
Manes.04G122200 Manihot esculenta HOM05D005672 ORTHO05D003038 7.1e-07 57.8 125 28.8
Prupe.3G073000 Prunus persica HOM05D005672 ORTHO05D003038 7.1e-07 57.8 96 34.4
BcaC05g25168 Brassica carinata HOM05D007482 ORTHO05D003038 1.2e-06 57.0 105 39.0
MD09G1214500 Malus domestica HOM05D005672 ORTHO05D003038 1.6e-06 56.6 120 32.5
PSO339G0096 Papaver somniferum HOM05D007482 ORTHO05D003038 2.1e-06 56.2 123 30.1
Manes.04G122300 Manihot esculenta HOM05D005672 ORTHO05D003038 2.7e-06 55.8 125 28.8
Thecc.06G054500 Theobroma cacao HOM05D005672 ORTHO05D003038 3.5e-06 55.5 114 30.7
Eucgr.L03103 Eucalyptus grandis HOM05D005672 ORTHO05D003038 7.9e-06 54.3 114 31.6
Thecc.06G084400 Theobroma cacao HOM05D005672 ORTHO05D003038 7.9e-06 54.3 125 30.4


User provided reference genes

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