Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g10740 Schrenkiella parvula HOM05D007926 ORTHO05D009983 2.5e-59 231.9 113 100.0
BcaC07g41751 Brassica carinata HOM05D007926 ORTHO05D009983 2.0e-48 195.7 111 83.8
BcaB08g37432 Brassica carinata HOM05D007926 ORTHO05D009983 1.3e-47 193.0 111 84.7
BcaC07g41734 Brassica carinata HOM05D007926 ORTHO05D009983 1.3e-47 193.0 111 84.7
BcaC07g41735 Brassica carinata HOM05D007926 ORTHO05D009983 1.3e-47 193.0 111 84.7
BraA08t35224Z Brassica rapa HOM05D007926 ORTHO05D009983 3.7e-47 191.4 114 81.6
BcaB02g06430 Brassica carinata HOM05D007926 ORTHO05D009983 8.2e-47 190.3 113 82.3
A06p09430 Brassica napus HOM05D007926 ORTHO05D009983 1.4e-46 189.5 113 82.3
BraA06t24128Z Brassica rapa HOM05D007926 ORTHO05D009983 1.4e-46 189.5 113 82.3
Thhalv10009916m.g Eutrema salsugineum HOM05D007926 ORTHO05D009983 1.4e-46 189.5 114 80.7
A08p33040 Brassica napus HOM05D007926 ORTHO05D009983 5.3e-46 187.6 114 80.7
A09p64120 Brassica napus HOM05D007926 ORTHO05D009983 7.0e-46 187.2 105 84.8
BraA09t41758Z Brassica rapa HOM05D007926 ORTHO05D009983 7.0e-46 187.2 105 84.8
BolC8t52311H Brassica oleracea HOM05D007926 ORTHO05D009983 1.2e-45 186.4 105 83.8
Carub.0001s1175 Capsella rubella HOM05D007926 ORTHO05D009983 1.2e-45 186.4 114 80.7
AL1G23320 Arabidopsis lyrata HOM05D007926 ORTHO05D009983 1.6e-45 186.0 114 80.7
BcaC05g25224 Brassica carinata HOM05D007926 ORTHO05D009983 4.5e-45 184.5 113 79.6
C05p11100 Brassica napus HOM05D007926 ORTHO05D009983 4.5e-45 184.5 113 79.6
BolC5t29857H Brassica oleracea HOM05D007926 ORTHO05D009983 4.5e-45 184.5 113 79.6
CARHR012430 Cardamine hirsuta HOM05D007926 ORTHO05D009983 7.7e-45 183.7 113 77.9
C08p47740 Brassica napus HOM05D007926 ORTHO05D009983 1.3e-44 183.0 105 82.9
AT1G12064 Arabidopsis thaliana HOM05D007926 ORTHO05D009983 3.7e-39 164.9 113 75.2
Aa31LG1G2660 Aethionema arabicum HOM05D007926 ORTHO05D009983 1.2e-37 159.8 113 71.7
THA.LOC104809471 Tarenaya hassleriana HOM05D007926 ORTHO05D009983 3.6e-26 121.7 70 80.0
BcaB02g06429 Brassica carinata HOM05D007926 ORTHO05D009983 8.0e-26 120.6 77 75.3
Sabra06G0007300 Salix brachista HOM05D007926 ORTHO05D009983 1.2e-21 106.7 106 49.1
Potri.006G009500 Populus trichocarpa HOM05D007926 ORTHO05D009983 1.6e-21 106.3 113 46.9
TWI63G0020 Tripterygium wilfordii HOM05D007926 ORTHO05D009983 5.9e-21 104.4 95 50.5
Ciclev10017269m.g Citrus clementina HOM05D007926 ORTHO05D009983 5.0e-20 101.3 74 58.1
Atru.chr1.2458 Acer truncatum HOM05D007926 ORTHO05D009983 2.5e-19 99.0 98 50.0
FAN21G0219 Fragaria x ananassa HOM05D007926 ORTHO05D009983 2.5e-19 99.0 100 50.0
CiPaw.09G102200 Carya illinoinensis HOM05D007926 ORTHO05D009983 3.3e-19 98.6 100 49.0
FvH4_3g01020 Fragaria vesca HOM05D007926 ORTHO05D009983 3.3e-19 98.6 100 50.0
FAN25G3056 Fragaria x ananassa HOM05D007926 ORTHO05D009983 1.2e-18 96.7 100 49.0
PGR042G0446 Punica granatum HOM05D007926 ORTHO05D009983 1.6e-18 96.3 101 48.5
TAR627G0241 Trochodendron aralioides HOM05D007926 ORTHO05D009983 1.6e-18 96.3 66 62.1
Duzib192G0081 Durio zibethinus HOM05D007926 ORTHO05D009983 2.1e-18 95.9 73 56.2
Gohir.A10G009400 Gossypium hirsutum HOM05D007926 ORTHO05D009983 3.6e-18 95.1 109 45.9
Cfa000107 Carpinus fangiana HOM05D007926 ORTHO05D009983 4.7e-18 94.7 101 47.5
Prupe.4G010900 Prunus persica HOM05D007926 ORTHO05D009983 6.2e-18 94.4 73 53.4
Manes.13G107300 Manihot esculenta HOM05D007926 ORTHO05D009983 8.0e-18 94.0 111 45.0
CANSAT56G0946 Cannabis sativa HOM05D007926 ORTHO05D009983 2.3e-17 92.4 82 51.2
Gohir.D06G216000 Gossypium hirsutum HOM05D007926 ORTHO05D009983 2.3e-17 92.4 113 46.9
Gorai.011G009900 Gossypium raimondii HOM05D007926 ORTHO05D009983 5.2e-17 91.3 109 45.9
Lalb_Chr18g0056941 Lupinus albus HOM05D007926 ORTHO05D009983 5.2e-17 91.3 70 57.1
CSS0027622 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 6.8e-17 90.9 114 43.9
Gorai.010G250100 Gossypium raimondii HOM05D007926 ORTHO05D009983 6.8e-17 90.9 105 47.6
Hma1.2p1_0700F.1_g205740 Hydrangea macrophylla HOM05D007926 ORTHO05D009983 6.8e-17 90.9 99 43.4
RhsimUnG0109600 Rhododendron simsii HOM05D007926 ORTHO05D009983 1.2e-16 90.1 111 41.4
Gohir.D10G009100 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.5e-16 89.7 106 45.3
Migut.H01604 Erythranthe guttata HOM05D007926 ORTHO05D009983 2.6e-16 89.0 72 52.8
RcHm_v2.0_Chr5g0001551 Rosa chinensis HOM05D007926 ORTHO05D009983 2.6e-16 89.0 97 46.4
MD10G1331300 Malus domestica HOM05D007926 ORTHO05D009983 5.8e-16 87.8 96 51.0
Manes.09G070200 Manihot esculenta HOM05D007926 ORTHO05D009983 9.8e-16 87.0 67 53.7
Oeu002767.1 Olea europaea HOM05D007926 ORTHO05D009983 1.3e-15 86.7 73 50.7
Phvul.006G143300 Phaseolus vulgaris HOM05D007926 ORTHO05D009983 1.3e-15 86.7 73 53.4
arahy.Tifrunner.gnm1.ann1.I7SJA3 Arachis hypogaea HOM05D007926 ORTHO05D009983 1.7e-15 86.3 70 50.0
Gohir.A06G205500 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.7e-15 86.3 113 43.4
Rhsim13G0146200 Rhododendron simsii HOM05D007926 ORTHO05D009983 1.7e-15 86.3 111 39.6
AUR62021866 Chenopodium quinoa HOM05D007926 ORTHO05D009983 2.2e-15 85.9 101 43.6
Glyma.15G114500 Glycine max HOM05D007926 ORTHO05D009983 6.4e-15 84.3 70 52.9
PGSC0003DMG400023652 Solanum tuberosum HOM05D007926 ORTHO05D009983 8.3e-15 84.0 72 48.6
Eucgr.E03949 Eucalyptus grandis HOM05D007926 ORTHO05D009983 1.1e-14 83.6 73 49.3
Nn1g03317 Nelumbo nucifera HOM05D007926 ORTHO05D009983 1.9e-14 82.8 110 40.0
Sc05g0009590 Simmondsia chinensis HOM05D007926 ORTHO05D009983 4.1e-14 81.6 102 45.1
Solyc04g014750.1 Solanum lycopersicum HOM05D007926 ORTHO05D009983 7.0e-14 80.9 103 41.7
Sopen04g006860 Solanum pennellii HOM05D007926 ORTHO05D009983 7.0e-14 80.9 103 41.7
DCAR_002220 Daucus carota HOM05D007926 ORTHO05D009983 2.0e-13 79.3 100 44.0
TPR.G13087 Trifolium pratense HOM05D007926 ORTHO05D009983 4.6e-13 78.2 70 50.0
ATR0712G022 Amborella trichopoda HOM05D007926 ORTHO05D009983 6.0e-13 77.8 69 50.7
SGA_v2.0_scaffold89G27497 Striga asiatica HOM05D007926 ORTHO05D009983 7.8e-13 77.4 104 37.5
CSS0041628 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 5.0e-12 74.7 90 40.0
Sed0015463 Sechium edule HOM05D007926 ORTHO05D009983 1.1e-11 73.6 70 50.0
Eucgr.E03934 Eucalyptus grandis HOM05D007926 ORTHO05D009983 9.5e-11 70.5 83 45.8
HanXRQChr15g0470111 Helianthus annuus HOM05D007926 ORTHO05D009983 9.5e-11 70.5 91 40.7
BolC8t49147H Brassica oleracea HOM05D007926 ORTHO05D009983 1.6e-10 69.7 37 89.2
CSS0047308 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 2.1e-10 69.3 111 36.0
MELO3C021682.2 Cucumis melo HOM05D007926 ORTHO05D009983 2.3e-09 65.9 66 45.5
ClCG01G010240 Citrullus lanatus HOM05D007926 ORTHO05D009983 8.9e-09 63.9 66 47.0
DCAR_004887 Daucus carota HOM05D000701 ORTHO05D000531 4.4e-08 61.6 46 50.0
Lj6g0017055 Lotus japonicus HOM05D007926 ORTHO05D009983 6.4e-07 57.8 93 36.6
Medtr2g025700 Medicago truncatula HOM05D007926 ORTHO05D009983 8.3e-07 57.4 64 43.8


User provided reference genes

Program Settings