Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g10010 Schrenkiella parvula HOM05D005683 ORTHO05D006958 4.0e-93 344.7 173 100.0
BcaC05g25012 Brassica carinata HOM05D005683 ORTHO05D006958 3.5e-65 251.9 249 56.6
A06p08000 Brassica napus HOM05D005683 ORTHO05D006958 6.0e-65 251.1 249 56.6
BraA06t23999Z Brassica rapa HOM05D005683 ORTHO05D006958 6.0e-65 251.1 249 56.6
C05p09600 Brassica napus HOM05D005683 ORTHO05D006958 6.2e-62 241.1 251 55.4
BolC5t29702H Brassica oleracea HOM05D005683 ORTHO05D006958 6.2e-62 241.1 251 55.4
Carub.0001s1101 Capsella rubella HOM05D005683 ORTHO05D006958 1.5e-60 236.5 251 54.2
AL1G22470 Arabidopsis lyrata HOM05D005683 ORTHO05D006958 2.0e-60 236.1 252 53.6
CARHR011620 Cardamine hirsuta HOM05D005683 ORTHO05D006958 2.9e-59 232.3 255 52.2
AT1G11380 Arabidopsis thaliana HOM05D005683 ORTHO05D006958 1.8e-56 223.0 251 51.0
Aa31LG1G3330 Aethionema arabicum HOM05D005683 ORTHO05D006958 3.7e-54 215.3 253 50.2
Sp2g25370 Schrenkiella parvula HOM05D005683 ORTHO05D006958 3.1e-45 185.7 100 94.0
THA.LOC104818970 Tarenaya hassleriana HOM05D005683 ORTHO05D006958 5.3e-45 184.9 254 46.5
EL10Ac8g19981 Beta vulgaris HOM05D005683 ORTHO05D006958 4.5e-36 155.2 187 47.6
Duzib235G0662 Durio zibethinus HOM05D005683 ORTHO05D006958 9.4e-34 147.5 174 50.0
Cpa.g.sc27.157 Carica papaya HOM05D005683 ORTHO05D006958 2.1e-33 146.4 252 39.7
Duzib192G0920 Durio zibethinus HOM05D005683 ORTHO05D006958 3.0e-32 142.5 164 51.2
COL.COLO4_31635 Corchorus olitorius HOM05D005683 ORTHO05D006958 2.0e-31 139.8 252 37.7
Dinv40458 Davidia involucrata HOM05D005683 ORTHO05D006958 3.3e-31 139.0 232 38.4
Actinidia24049 Actinidia chinensis HOM05D005683 ORTHO05D006958 1.1e-29 134.0 216 38.4
Eucgr.E03677 Eucalyptus grandis HOM05D005683 ORTHO05D006958 1.1e-29 134.0 207 39.6
Thecc.06G202400 Theobroma cacao HOM05D005683 ORTHO05D006958 3.1e-29 132.5 252 37.3
Lalb_Chr05g0218101 Lupinus albus HOM05D005683 ORTHO05D006958 4.1e-29 132.1 226 37.2
GSVIVG01003677001 Vitis vinifera HOM05D005683 ORTHO05D006958 4.1e-29 132.1 223 37.2
QL05p080525 Quercus lobata HOM05D005683 ORTHO05D006958 5.3e-29 131.7 251 37.8
TAR626G0062 Trochodendron aralioides HOM05D005683 ORTHO05D006958 1.2e-28 130.6 213 39.0
AUR62014686 Chenopodium quinoa HOM05D005683 ORTHO05D006958 1.5e-28 130.2 146 48.6
CANSAT56G4448 Cannabis sativa HOM05D005683 ORTHO05D006958 2.6e-28 129.4 246 36.2
Atru.chr10.2035 Acer truncatum HOM05D005683 ORTHO05D006958 4.5e-28 128.6 216 38.4
Rhsim02G0118200 Rhododendron simsii HOM05D005683 ORTHO05D006958 5.9e-28 128.3 229 37.1
Rhsim02G0118400 Rhododendron simsii HOM05D005683 ORTHO05D006958 5.9e-28 128.3 229 37.1
TAR629G3446 Trochodendron aralioides HOM05D005683 ORTHO05D006958 1.3e-27 127.1 241 38.6
AUR62012512 Chenopodium quinoa HOM05D005683 ORTHO05D006958 1.7e-27 126.7 244 35.7
Haze_06612 Corylus avellana HOM05D005683 ORTHO05D006958 2.2e-27 126.3 217 37.8
Nitab4.5_0000649g0210 Nicotiana tabacum HOM05D005683 ORTHO05D006958 2.2e-27 126.3 233 39.5
Potri.011G040100 Populus trichocarpa HOM05D005683 ORTHO05D006958 2.2e-27 126.3 250 37.2
MELO3C007336.2 Cucumis melo HOM05D005683 ORTHO05D006958 2.9e-27 125.9 247 34.4
Lsat_1_v5_gn_7_20320 Lactuca sativa HOM05D005683 ORTHO05D006958 5.0e-27 125.2 249 35.7
PGR042G1297 Punica granatum HOM05D005683 ORTHO05D006958 5.0e-27 125.2 234 36.3
MD05G1328900 Malus domestica HOM05D005683 ORTHO05D006958 6.5e-27 124.8 251 36.7
SGA_v2.0_scaffold114G31992 Striga asiatica HOM05D005683 ORTHO05D006958 8.5e-27 124.4 235 38.3
arahy.Tifrunner.gnm1.ann1.1EQ2T2 Arachis hypogaea HOM05D005683 ORTHO05D006958 1.5e-26 123.6 251 35.5
Manes.16G019184 Manihot esculenta HOM05D005683 ORTHO05D006958 1.5e-26 123.6 246 35.0
Gohir.A05G166700 Gossypium hirsutum HOM05D005683 ORTHO05D006958 1.9e-26 123.2 229 37.1
Gohir.D05G169700 Gossypium hirsutum HOM05D005683 ORTHO05D006958 1.9e-26 123.2 229 37.1
Gorai.009G174900 Gossypium raimondii HOM05D005683 ORTHO05D006958 1.9e-26 123.2 229 37.1
Sed0004151 Sechium edule HOM05D005683 ORTHO05D006958 1.9e-26 123.2 212 37.3
Ciclev10016376m.g Citrus clementina HOM05D005683 ORTHO05D006958 2.5e-26 122.9 207 36.7
TWI38G0326 Tripterygium wilfordii HOM05D005683 ORTHO05D006958 3.2e-26 122.5 254 34.6
HanXRQChr15g0482541 Helianthus annuus HOM05D005683 ORTHO05D006958 4.2e-26 122.1 228 37.7
Oeu021580.1 Olea europaea HOM05D005683 ORTHO05D006958 5.5e-26 121.7 221 36.7
PGSC0003DMG400022348 Solanum tuberosum HOM05D005683 ORTHO05D006958 7.2e-26 121.3 214 38.8
arahy.Tifrunner.gnm1.ann1.YX67LP Arachis hypogaea HOM05D005683 ORTHO05D006958 9.4e-26 120.9 251 35.5
ClCG01G022390 Citrullus lanatus HOM05D005683 ORTHO05D006958 1.2e-25 120.6 247 31.6
Manes.17G032900 Manihot esculenta HOM05D005683 ORTHO05D006958 1.2e-25 120.6 249 35.7
Solyc02g079390.4 Solanum lycopersicum HOM05D005683 ORTHO05D006958 2.1e-25 119.8 214 37.4
Sopen02g024190 Solanum pennellii HOM05D005683 ORTHO05D006958 2.1e-25 119.8 214 37.4
CiPaw.10G115800 Carya illinoinensis HOM05D005683 ORTHO05D006958 2.7e-25 119.4 214 39.7
MBI02_g38754_MAGBIO Magnolia biondii HOM05D005683 ORTHO05D006958 2.7e-25 119.4 212 35.4
Lj2A278T71 Lonicera japonica HOM05D005683 ORTHO05D006958 3.6e-25 119.0 217 35.0
MD10G1305800 Malus domestica HOM05D005683 ORTHO05D006958 3.6e-25 119.0 251 35.9
VMungo0251G1023 Vigna mungo HOM05D005683 ORTHO05D006958 3.6e-25 119.0 234 33.8
Hund23579 Selenicereus undatus HOM05D005683 ORTHO05D006958 4.7e-25 118.6 237 34.2
Sc17g0006760 Simmondsia chinensis HOM05D005683 ORTHO05D006958 6.1e-25 118.2 224 34.8
Actinidia11820 Actinidia chinensis HOM05D003506 ORTHO05D006958 8.0e-25 117.9 73 71.2
CsaV3_6G049570 Cucumis sativus L. HOM05D005683 ORTHO05D006958 8.0e-25 117.9 214 35.5
Potri.004G026700 Populus trichocarpa HOM05D005683 ORTHO05D006958 8.0e-25 117.9 226 35.8
FvH4_3g03670 Fragaria vesca HOM05D005683 ORTHO05D006958 1.4e-24 117.1 227 35.2
FAN11G3671 Fragaria x ananassa HOM05D005683 ORTHO05D006958 1.4e-24 117.1 227 35.2
FAN16G0586 Fragaria x ananassa HOM05D005683 ORTHO05D006958 1.4e-24 117.1 227 35.2
MBI02_g46153_MAGBIO Magnolia biondii HOM05D005683 ORTHO05D006958 1.8e-24 116.7 204 36.3
Ah.09g236340 Amaranthus hybridus HOM05D005683 ORTHO05D006958 2.3e-24 116.3 221 34.4
Nn1g03823 Nelumbo nucifera HOM05D005683 ORTHO05D006958 2.3e-24 116.3 247 35.6
Cc02_g12200 Coffea canephora HOM05D005683 ORTHO05D006958 3.0e-24 115.9 223 34.5
FAN25G1197 Fragaria x ananassa HOM05D005683 ORTHO05D006958 5.2e-24 115.2 214 36.0
Gorai.011G021200 Gossypium raimondii HOM05D005683 ORTHO05D006958 5.2e-24 115.2 219 36.1
Medtr2g011490 Medicago truncatula HOM05D005683 ORTHO05D006958 5.2e-24 115.2 249 34.1
CSS0013005 Camellia sinensis var. sinensis HOM05D005683 ORTHO05D006958 6.7e-24 114.8 73 71.2
Phvul.002G220600 Phaseolus vulgaris HOM05D005683 ORTHO05D006958 6.7e-24 114.8 236 35.2
Prupe.4G033900 Prunus persica HOM05D005683 ORTHO05D006958 6.7e-24 114.8 252 35.3
Sed0027497 Sechium edule HOM05D005683 ORTHO05D006958 6.7e-24 114.8 215 36.3
CSS0013141 Camellia sinensis var. sinensis HOM05D005683 ORTHO05D006958 8.8e-24 114.4 73 69.9
CiPaw.09G156400 Carya illinoinensis HOM05D005683 ORTHO05D006958 1.5e-23 113.6 250 35.6
Nitab4.5_0005620g0030 Nicotiana tabacum HOM05D005683 ORTHO05D006958 1.5e-23 113.6 242 35.5
Peaxi162Scf01035g00114 Petunia axillaris HOM05D005683 ORTHO05D006958 2.0e-23 113.2 236 36.4
Lj1A1216T22 Lonicera japonica HOM05D005683 ORTHO05D006958 2.6e-23 112.8 75 72.0
Gohir.D10G020000 Gossypium hirsutum HOM05D005683 ORTHO05D006958 3.3e-23 112.5 219 35.6
FAN21G2210 Fragaria x ananassa HOM05D005683 ORTHO05D006958 4.4e-23 112.1 214 35.5
PSO541G3127 Papaver somniferum HOM05D005683 ORTHO05D006958 5.7e-23 111.7 246 33.3
TPR.G15376 Trifolium pratense HOM05D005683 ORTHO05D006958 7.5e-23 111.3 231 31.6
TAR627G0612 Trochodendron aralioides HOM05D005683 ORTHO05D006958 7.5e-23 111.3 240 36.2
Glyma.13G247700 Glycine max HOM05D005683 ORTHO05D006958 9.7e-23 110.9 237 33.8
Gohir.A10G019100 Gossypium hirsutum HOM05D005683 ORTHO05D006958 9.7e-23 110.9 219 35.6
vmacro15855 Vaccinium macrocarpon HOM05D005683 ORTHO05D006958 9.7e-23 110.9 66 68.2
RcHm_v2.0_Chr5g0005711 Rosa chinensis HOM05D005683 ORTHO05D006958 1.7e-22 110.2 222 34.7
Lj4g0024466 Lotus japonicus HOM05D005683 ORTHO05D006958 4.8e-22 108.6 218 33.5
Hund21293 Selenicereus undatus HOM05D005683 ORTHO05D006958 6.3e-22 108.2 236 33.9
Migut.H01529 Erythranthe guttata HOM05D005683 ORTHO05D006958 8.2e-22 107.8 216 34.7
Glyma.15G066100 Glycine max HOM05D005683 ORTHO05D006958 1.4e-21 107.1 228 32.5
Phvul.006G193600 Phaseolus vulgaris HOM05D005683 ORTHO05D006958 1.4e-21 107.1 241 33.6
Lj6g0011505 Lotus japonicus HOM05D005683 ORTHO05D006958 2.4e-21 106.3 71 63.4
Medtr4g091550 Medicago truncatula HOM05D005683 ORTHO05D006958 2.4e-21 106.3 217 34.6
TPR.G36735 Trifolium pratense HOM05D005683 ORTHO05D006958 2.4e-21 106.3 211 35.1
Ca_00226_v3 Cicer arietinum L. HOM05D005683 ORTHO05D006958 5.3e-21 105.1 247 33.6
Ca_18471_v3 Cicer arietinum L. HOM05D005683 ORTHO05D006958 7.0e-21 104.8 229 34.1
ECA236G4035 Erigeron canadensis HOM05D005683 ORTHO05D006958 9.1e-21 104.4 73 65.8
PSO675G7592 Papaver somniferum HOM05D005683 ORTHO05D006958 9.1e-21 104.4 249 32.1
VMungo0540G1177 Vigna mungo HOM05D005683 ORTHO05D006958 1.2e-20 104.0 249 32.5
MSTRG.7277 Avicennia marina HOM05D005683 ORTHO05D006958 2.0e-20 103.2 72 66.7
CAN.G424.37 Capsicum annuum HOM05D005683 ORTHO05D006958 2.0e-20 103.2 75 64.0
Glyma.07G188900 Glycine max HOM05D005683 ORTHO05D006958 2.0e-20 103.2 236 30.9
Lalb_Chr18g0060021 Lupinus albus HOM05D005683 ORTHO05D006958 2.6e-20 102.8 227 33.0
Lalb_Chr09g0327231 Lupinus albus HOM05D005683 ORTHO05D006958 5.9e-20 101.7 72 59.7
DCAR_004160 Daucus carota HOM05D005683 ORTHO05D006958 1.7e-19 100.1 229 31.9
arahy.Tifrunner.gnm1.ann1.NC80VA Arachis hypogaea HOM05D005683 ORTHO05D006958 2.2e-19 99.8 221 33.0
Psat1g209480 Pisum sativum HOM05D005683 ORTHO05D006958 3.2e-18 95.9 72 58.3
HPP92_000912 Vanilla planifolia HOM05D005683 ORTHO05D006958 7.2e-18 94.7 207 35.3
arahy.Tifrunner.gnm1.ann1.B3SD72 Arachis hypogaea HOM05D005683 ORTHO05D006958 9.4e-18 94.4 221 33.0
Migut.M01228 Erythranthe guttata HOM05D005683 ORTHO05D006958 5.2e-16 88.6 51 68.6
Zm00001eb323790 Zea mays HOM05D005683 ORTHO05D006958 5.2e-16 88.6 65 56.9
ATR1132G083 Amborella trichopoda HOM05D005683 ORTHO05D006958 7.5e-15 84.7 48 66.7
unitig_748.g7566 Utricularia gibba HOM05D005683 ORTHO05D006958 1.7e-14 83.6 72 54.2
CDE02G0678 Ceratophyllum demersum HOM05D005683 ORTHO05D006958 2.2e-14 83.2 99 43.4
Pp3c21_1800 Physcomitrium patens HOM05D005683 ORTHO05D006958 2.5e-10 69.7 60 51.7
Pp3c18_19760 Physcomitrium patens HOM05D005683 ORTHO05D006958 5.5e-10 68.6 62 50.0


User provided reference genes

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