Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 5.6e-206 720.7 363 100.0
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 4.6e-192 674.5 365 93.2
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 5.1e-191 671.0 364 91.5
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 2.5e-190 668.7 364 91.2
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 2.0e-187 659.1 367 91.3
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 1.0e-186 656.8 367 90.2
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 2.2e-186 655.6 368 91.0
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 1.1e-185 653.3 363 90.1
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 1.1e-185 653.3 363 90.1
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 1.0e-183 646.7 367 89.4
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 2.7e-176 622.1 363 86.2
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 2.6e-174 615.5 366 83.9
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 2.0e-155 552.7 363 76.9
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 4.0e-143 511.9 333 75.4
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 5.2e-143 511.5 315 79.0
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 1.5e-142 510.0 299 80.3
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 4.9e-141 505.0 324 74.4
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 6.3e-141 504.6 357 69.7
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 6.3e-141 504.6 357 69.7
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 1.1e-140 503.8 311 76.5
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 1.1e-140 503.8 371 68.2
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 1.4e-140 503.4 355 69.9
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 1.8e-140 503.1 357 69.5
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 2.4e-140 502.7 308 77.6
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 2.4e-140 502.7 299 79.3
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 4.1e-140 501.9 311 76.2
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 4.1e-140 501.9 370 67.3
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 4.1e-140 501.9 299 78.3
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 4.1e-140 501.9 352 68.5
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 7.0e-140 501.1 343 71.7
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 1.6e-139 500.0 354 70.6
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 5.9e-139 498.0 296 79.4
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 5.9e-139 498.0 357 69.7
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 1.0e-138 497.3 313 74.1
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 1.3e-138 496.9 369 68.8
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 1.7e-138 496.5 292 80.1
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 2.3e-138 496.1 313 74.4
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 2.3e-138 496.1 313 73.8
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 2.9e-138 495.7 355 68.7
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 2.9e-138 495.7 314 75.5
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 5.0e-138 495.0 300 76.7
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 5.0e-138 495.0 291 79.7
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 6.6e-138 494.6 315 75.6
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 6.6e-138 494.6 322 72.0
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 8.6e-138 494.2 303 76.9
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 1.9e-137 493.0 323 72.1
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 2.5e-137 492.7 325 71.7
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 3.3e-137 492.3 359 68.5
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 1.6e-136 490.0 301 77.1
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 1.6e-136 490.0 295 79.3
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 1.6e-136 490.0 292 78.8
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 2.1e-136 489.6 298 76.5
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 2.1e-136 489.6 292 78.8
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 2.8e-136 489.2 349 68.8
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 3.6e-136 488.8 373 66.0
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 3.6e-136 488.8 299 77.6
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 4.7e-136 488.4 291 78.4
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 8.0e-136 487.6 301 76.7
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 1.4e-135 486.9 301 75.7
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 1.8e-135 486.5 323 71.2
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 2.3e-135 486.1 306 75.5
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 2.3e-135 486.1 357 70.0
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 4.0e-135 485.3 291 78.7
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 4.0e-135 485.3 419 61.1
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 5.2e-135 485.0 369 65.9
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 6.8e-135 484.6 300 75.3
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 6.8e-135 484.6 323 70.6
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 8.9e-135 484.2 371 67.7
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 1.2e-134 483.8 300 74.3
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 5.8e-134 481.5 292 78.8
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 5.8e-134 481.5 306 75.2
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 7.5e-134 481.1 370 65.1
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 9.8e-134 480.7 303 75.6
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 1.3e-133 480.3 360 68.3
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 1.7e-133 479.9 326 70.2
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 4.9e-133 478.4 299 75.3
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 8.3e-133 477.6 373 63.8
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 1.1e-132 477.2 327 70.3
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 2.4e-132 476.1 322 71.4
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 5.4e-132 474.9 351 66.1
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 1.2e-131 473.8 298 76.5
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 1.2e-131 473.8 323 71.8
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 1.2e-131 473.8 324 72.8
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 2.0e-131 473.0 324 69.1
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 2.7e-131 472.6 365 63.6
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 2.7e-131 472.6 299 74.9
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 1.0e-130 470.7 344 68.6
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.7e-130 469.9 372 64.0
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 6.6e-130 468.0 337 68.0
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 2.5e-129 466.1 343 68.5
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 3.6e-128 462.2 370 62.7
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 9.8e-126 454.1 287 73.2
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 2.2e-125 453.0 356 63.5
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 5.0e-122 441.8 296 72.6
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 3.3e-121 439.1 361 60.4
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 3.6e-120 435.6 296 70.6
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 3.1e-119 432.6 270 77.0
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 4.0e-119 432.2 325 64.9
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 4.6e-115 418.7 291 65.6
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 1.0e-114 417.5 275 72.0
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.5e-113 413.7 303 64.7
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 4.3e-113 412.1 304 62.5
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.6e-112 410.2 300 64.7
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 3.6e-112 409.1 310 61.9
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 5.8e-110 401.7 229 82.5
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 4.4e-102 375.6 438 49.1
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 7.1e-92 341.7 340 53.5
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 3.1e-87 326.2 182 81.3
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 6.9e-87 325.1 307 59.0
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 2.3e-82 310.1 192 78.1
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 2.5e-81 306.6 231 66.7
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 6.2e-80 302.0 215 64.7
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 2.5e-76 290.0 271 59.0
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 1.3e-74 284.3 252 58.3
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 9.7e-73 278.1 185 70.8
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 3.8e-69 266.2 291 50.9
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 7.9e-59 231.9 242 57.9
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 1.6e-22 111.3 63 85.7
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 3.9e-21 106.7 94 55.3
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 6.1e-19 99.4 93 57.0
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 2.3e-18 97.4 93 55.9
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 3.7e-08 63.5 36 69.4


User provided reference genes

Program Settings