Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 4.5e-127 458.0 239 100.0
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 9.1e-112 407.1 239 87.4
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 2.6e-106 389.0 236 86.4
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 1.8e-104 382.9 237 84.8
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 2.4e-104 382.5 237 84.8
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 3.1e-104 382.1 237 85.7
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 3.1e-104 382.1 237 85.7
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 7.0e-104 380.9 234 84.2
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 1.7e-102 376.3 238 82.8
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 9.1e-96 354.0 227 82.4
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 7.8e-79 297.7 226 70.4
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 8.6e-54 214.5 221 50.7
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 4.7e-52 208.8 221 52.0
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 8.1e-52 208.0 230 52.6
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 1.4e-51 207.2 230 48.3
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 1.4e-51 207.2 219 51.1
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 2.6e-50 203.0 226 47.8
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 5.8e-50 201.8 213 54.5
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 7.6e-50 201.4 215 52.6
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 1.7e-49 200.3 221 51.6
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 6.4e-49 198.4 219 48.4
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 6.4e-49 198.4 222 52.3
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 1.1e-48 197.6 227 44.5
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 5.4e-48 195.3 221 50.2
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 5.4e-48 195.3 219 52.1
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 2.1e-47 193.4 220 47.3
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 3.5e-47 192.6 226 48.2
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 4.6e-47 192.2 226 48.2
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 1.0e-46 191.0 118 85.6
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 1.0e-46 191.0 223 50.2
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 1.7e-46 190.3 219 51.6
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 2.3e-46 189.9 221 48.4
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 3.0e-46 189.5 230 50.0
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 3.9e-46 189.1 226 47.8
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 5.1e-46 188.7 222 48.2
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 6.6e-46 188.3 228 47.4
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 8.7e-46 188.0 228 46.9
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 1.9e-45 186.8 214 52.8
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 2.5e-45 186.4 222 48.2
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 9.6e-45 184.5 230 49.1
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 1.2e-44 184.1 223 48.0
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 1.1e-43 181.0 221 48.4
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 1.8e-43 180.3 225 47.6
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 3.1e-43 179.5 235 45.1
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 2.0e-42 176.8 218 47.7
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 1.3e-41 174.1 209 48.3
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 1.7e-41 173.7 213 47.4
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 1.1e-40 171.0 196 45.4
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 1.9e-40 170.2 182 47.3
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 1.0e-38 164.5 217 45.6
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 1.7e-38 163.7 142 60.6
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 3.0e-38 162.9 220 45.0
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 1.9e-37 160.2 229 42.8
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 1.9e-37 160.2 229 42.8
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 3.3e-37 159.5 157 55.4
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 3.3e-37 159.5 204 44.6
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 1.3e-36 157.5 229 42.8
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 2.8e-36 156.4 179 52.5
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 3.6e-36 156.0 164 50.6
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 7.1e-32 141.7 188 41.0
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 2.3e-30 136.7 171 44.4
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 5.6e-29 132.1 197 39.6
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 8.4e-25 118.2 119 48.7
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 2.3e-22 110.2 158 44.3
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 7.4e-21 105.1 230 31.7
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 1.6e-20 104.0 213 31.9
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 7.6e-18 95.1 201 30.3
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 3.8e-17 92.8 104 42.3
CsaV3_6G003110 Cucumis sativus L. HOM05D007934 ORTHO05D010067 6.7e-14 82.0 106 47.2
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 8.7e-14 81.6 200 30.0
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 5.7e-13 79.0 65 63.1
TAR636G1845 Trochodendron aralioides HOM05D007934 ORTHO05D010067 2.8e-12 76.6 99 47.5
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.8e-11 73.9 190 28.4
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 2.4e-11 73.6 186 28.5
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 4.1e-11 72.8 137 33.6
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 5.3e-11 72.4 146 32.9
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 2.6e-10 70.1 68 48.5
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 2.2e-09 67.0 122 32.8


User provided reference genes

Program Settings