Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g08900 Schrenkiella parvula HOM05D008777 ORTHO05D010940 1.0e-41 172.9 84 100.0
C09p06090 Brassica napus HOM05D008777 ORTHO05D010940 2.6e-29 131.7 82 70.7
C09p06100 Brassica napus HOM05D008777 ORTHO05D010940 2.6e-29 131.7 82 70.7
C09p06110 Brassica napus HOM05D008777 ORTHO05D010940 2.6e-29 131.7 82 70.7
C08p13570 Brassica napus HOM05D008777 ORTHO05D010940 5.8e-29 130.6 82 74.4
BolC8t48994H Brassica oleracea HOM05D008777 ORTHO05D010940 5.8e-29 130.6 82 74.4
BolC8t48997H Brassica oleracea HOM05D008777 ORTHO05D010940 5.8e-29 130.6 82 74.4
A08p34050 Brassica napus HOM05D008777 ORTHO05D010940 1.7e-28 129.0 82 73.2
AL3G29910 Arabidopsis lyrata HOM05D008777 ORTHO05D010940 1.7e-25 119.0 84 70.2
Carub.0003s1668 Capsella rubella HOM05D008777 ORTHO05D010940 8.6e-25 116.7 85 68.2
BolC5t29596H Brassica oleracea HOM05D008777 ORTHO05D010940 1.1e-22 109.8 83 72.3
C05p08460 Brassica napus HOM05D008777 ORTHO05D010940 5.8e-21 104.0 83 69.9
C09p06130 Brassica napus HOM05D008777 ORTHO05D010940 1.7e-20 102.4 71 69.0
C03p53690 Brassica napus HOM05D008777 ORTHO05D010940 8.3e-20 100.1 82 58.5
BolC3t17629H Brassica oleracea HOM05D008777 ORTHO05D010940 8.3e-20 100.1 82 58.5
BraA08t35317Z Brassica rapa HOM05D008777 ORTHO05D010940 2.4e-19 98.6 82 62.2
A06p06960 Brassica napus HOM05D008777 ORTHO05D010940 5.4e-19 97.4 84 66.7
AL2G25160 Arabidopsis lyrata HOM05D008777 ORTHO05D010940 3.5e-18 94.7 84 60.7
AT3G16895 Arabidopsis thaliana HOM05D008777 ORTHO05D010940 1.9e-16 89.0 84 54.8
BraA06t23912Z Brassica rapa HOM05D008777 ORTHO05D010940 5.6e-16 87.4 75 69.3
C06p49290 Brassica napus HOM05D008777 ORTHO05D010940 8.1e-15 83.6 85 56.5
CARHR078660 Cardamine hirsuta HOM05D008777 ORTHO05D010940 2.4e-14 82.0 82 53.7
BolC6t39964H Brassica oleracea HOM05D008777 ORTHO05D010940 3.1e-14 81.6 85 55.3
Carub.0003s1667 Capsella rubella HOM05D008777 ORTHO05D010940 4.0e-14 81.3 84 56.0
Carub.0003s1666 Capsella rubella HOM05D008777 ORTHO05D010940 5.2e-14 80.9 82 53.7
C06p49280 Brassica napus HOM05D008777 ORTHO05D010940 8.9e-14 80.1 82 54.9
BolC6t39963H Brassica oleracea HOM05D008777 ORTHO05D010940 8.9e-14 80.1 82 54.9
AL3G35850 Arabidopsis lyrata HOM05D008777 ORTHO05D010940 3.4e-13 78.2 82 52.4
AL3G30150 Arabidopsis lyrata HOM05D008777 ORTHO05D010940 9.9e-13 76.6 84 51.2
BcaB04g19329 Brassica carinata HOM05D008777 ORTHO05D010940 9.9e-13 76.6 53 60.4
AL5G35110 Arabidopsis lyrata HOM05D000559 ORTHO05D003606 2.2e-12 75.5 48 62.5
Sp3g30050 Schrenkiella parvula HOM05D000037 ORTHO05D000150 2.9e-12 75.1 59 54.2
AT3G17155 Arabidopsis thaliana HOM05D008777 ORTHO05D010940 1.1e-11 73.2 84 50.0
AL3G14480 Arabidopsis lyrata HOM05D008777 ORTHO05D010940 4.1e-11 71.2 72 52.8
BcaB04g19324 Brassica carinata HOM05D008777 ORTHO05D010940 7.1e-11 70.5 50 58.0
AT5G19175 Arabidopsis thaliana HOM05D008777 ORTHO05D010940 9.2e-11 70.1 78 50.0
Carub.0006s1754 Capsella rubella HOM05D008777 ORTHO05D010940 2.1e-10 68.9 82 45.1
C05p08780 Brassica napus HOM05D012648 ORTHO05D015002 3.5e-10 68.2 81 48.1
AT5G19172 Arabidopsis thaliana HOM05D008777 ORTHO05D010940 4.6e-10 67.8 83 50.6
Carub.0007s2959 Capsella rubella HOM05D008777 ORTHO05D010940 4.6e-10 67.8 84 46.4
Carub.0003s2387 Capsella rubella HOM05D008777 ORTHO05D010940 3.0e-09 65.1 85 51.8
A02p28580 Brassica napus HOM05D012648 ORTHO05D015002 5.1e-09 64.3 84 47.6
C02p45690 Brassica napus HOM05D012648 ORTHO05D015002 6.6e-09 63.9 84 47.6
BraA02t07895Z Brassica rapa HOM05D012648 ORTHO05D015002 6.6e-09 63.9 84 47.6
AT1G32763 Arabidopsis thaliana HOM05D013515 ORTHO05D015351 7.3e-08 60.5 84 44.0
AT3G04545 Arabidopsis thaliana HOM05D013515 ORTHO05D015351 7.3e-08 60.5 84 44.0
CARHR078720 Cardamine hirsuta HOM05D013515 ORTHO05D015351 9.6e-08 60.1 81 43.2
CARHR261380 Cardamine hirsuta HOM05D013515 ORTHO05D015351 1.2e-07 59.7 81 42.0
Thhalv10023103m.g Eutrema salsugineum HOM05D010148 ORTHO05D012316 1.2e-07 59.7 81 43.2
AL3G14560 Arabidopsis lyrata HOM05D013515 ORTHO05D015351 1.6e-07 59.3 80 43.8
AT3G04540 Arabidopsis thaliana HOM05D013515 ORTHO05D015351 3.6e-07 58.2 80 42.5
C06p49270 Brassica napus HOM05D008777 ORTHO05D010940 1.1e-06 56.6 80 42.5
BolC6t39962H Brassica oleracea HOM05D008777 ORTHO05D010940 1.1e-06 56.6 80 42.5
AT2G33233 Arabidopsis thaliana HOM05D010148 ORTHO05D012316 1.4e-06 56.2 81 39.5
CARHR149470 Cardamine hirsuta HOM05D008777 ORTHO05D010940 1.4e-06 56.2 69 47.8
Carub.0003s1387 Capsella rubella HOM05D010148 ORTHO05D012316 1.8e-06 55.8 90 42.2
Carub.0001s3329 Capsella rubella HOM05D013515 ORTHO05D015351 2.4e-06 55.5 84 40.5
Carub.0001s3331 Capsella rubella HOM05D013515 ORTHO05D015351 2.4e-06 55.5 84 40.5
A06p07130 Brassica napus HOM05D012648 ORTHO05D015002 3.1e-06 55.1 83 45.8
BraA06t23929Z Brassica rapa HOM05D012648 ORTHO05D015002 3.1e-06 55.1 83 45.8
C05p08670 Brassica napus HOM05D012648 ORTHO05D015002 4.0e-06 54.7 83 44.6
Carub.0001s3291 Capsella rubella HOM05D013515 ORTHO05D015351 5.2e-06 54.3 84 40.5
Thhalv10023016m.g Eutrema salsugineum HOM05D010148 ORTHO05D012316 5.2e-06 54.3 81 42.0
Thhalv10023060m.g Eutrema salsugineum HOM05D010148 ORTHO05D012316 5.2e-06 54.3 81 40.7
BolC5t29616H Brassica oleracea HOM05D012648 ORTHO05D015002 6.9e-06 53.9 83 44.6
AT3G48231 Arabidopsis thaliana HOM05D010148 ORTHO05D012316 9.0e-06 53.5 81 39.5


User provided reference genes

Program Settings