Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g08120 Schrenkiella parvula HOM05D003268 ORTHO05D003719 3.9e-137 491.5 255 100.0
C05p07520 Brassica napus HOM05D003268 ORTHO05D003719 1.3e-84 317.0 257 70.0
BolC5t29506H Brassica oleracea HOM05D003268 ORTHO05D003719 1.3e-84 317.0 257 70.0
A06p06210 Brassica napus HOM05D003268 ORTHO05D003719 7.2e-83 311.2 256 68.8
BraA06t23832Z Brassica rapa HOM05D003268 ORTHO05D003719 7.2e-83 311.2 256 68.8
Thhalv10008580m.g Eutrema salsugineum HOM05D003268 ORTHO05D003719 5.7e-80 301.6 256 66.8
Carub.0001s0886 Capsella rubella HOM05D003268 ORTHO05D003719 1.3e-76 290.4 263 63.1
C08p49440 Brassica napus HOM05D003268 ORTHO05D003719 8.6e-76 287.7 250 64.0
A09p65470 Brassica napus HOM05D003268 ORTHO05D003719 2.3e-73 279.6 255 61.6
BraA09t41892Z Brassica rapa HOM05D003268 ORTHO05D003719 2.3e-73 279.6 255 61.6
AT1G09520 Arabidopsis thaliana HOM05D003268 ORTHO05D003719 3.0e-73 279.3 266 62.4
AL1G20040 Arabidopsis lyrata HOM05D003268 ORTHO05D003719 5.2e-73 278.5 269 61.3
C08p00580 Brassica napus HOM05D003268 ORTHO05D003719 1.5e-72 276.9 251 62.9
CARHR009490 Cardamine hirsuta HOM05D003268 ORTHO05D003719 2.0e-72 276.6 262 61.8
C08p12950 Brassica napus HOM05D003268 ORTHO05D003719 1.1e-67 260.8 221 62.9
BolC8t48925H Brassica oleracea HOM05D003268 ORTHO05D003719 7.3e-67 258.1 224 61.6
A08p34520 Brassica napus HOM05D003268 ORTHO05D003719 2.8e-66 256.1 219 59.4
Aa31LG1G5560 Aethionema arabicum HOM05D003268 ORTHO05D003719 1.0e-65 254.2 279 54.1
BraA08t35363Z Brassica rapa HOM05D003268 ORTHO05D003719 2.0e-64 250.0 222 61.3
A08p34530 Brassica napus HOM05D003268 ORTHO05D003719 7.5e-64 248.1 197 68.0
BcaC07g38514 Brassica carinata HOM05D003268 ORTHO05D003719 8.3e-63 244.6 190 67.9
BraA08t35364Z Brassica rapa HOM05D003268 ORTHO05D003719 9.2e-62 241.1 198 67.2
THA.LOC104820490 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 1.6e-61 240.4 250 54.8
THA.LOC104816841 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 7.8e-61 238.0 261 53.6
BolC8t52481H Brassica oleracea HOM05D003268 ORTHO05D003719 4.0e-57 225.7 156 69.9
BcaC07g38513 Brassica carinata HOM05D003268 ORTHO05D003719 8.1e-50 201.4 230 54.3
BcaC07g36965 Brassica carinata HOM05D003268 ORTHO05D003719 5.1e-44 182.2 126 68.3
Duzib128G0788 Durio zibethinus HOM05D003268 ORTHO05D003719 2.6e-40 169.9 164 56.7
Cpa.g.sc48.222 Carica papaya HOM05D003268 ORTHO05D003719 4.9e-39 165.6 228 43.4
TWI56G0501 Tripterygium wilfordii HOM05D003268 ORTHO05D003719 1.9e-38 163.7 185 49.7
Gohir.A13G177600 Gossypium hirsutum HOM05D003268 ORTHO05D003719 1.7e-36 157.1 175 53.1
Thecc.05G329300 Theobroma cacao HOM05D003268 ORTHO05D003719 1.7e-36 157.1 193 49.2
Manes.08G107700 Manihot esculenta HOM05D003268 ORTHO05D003719 3.0e-36 156.4 254 43.7
BcaC07g41877 Brassica carinata HOM05D003268 ORTHO05D003719 6.6e-36 155.2 250 48.4
Gohir.D13G184200 Gossypium hirsutum HOM05D003268 ORTHO05D003719 8.7e-36 154.8 193 50.8
Gorai.013G209800 Gossypium raimondii HOM05D003268 ORTHO05D003719 8.7e-36 154.8 193 50.8
COL.COLO4_05489 Corchorus olitorius HOM05D003268 ORTHO05D003719 4.3e-35 152.5 179 47.5
ClCG03G017870 Citrullus lanatus HOM05D003268 ORTHO05D003719 6.9e-33 145.2 254 40.2
Sed0007403 Sechium edule HOM05D003268 ORTHO05D003719 1.2e-32 144.4 240 40.4
Ciclev10013870m.g Citrus clementina HOM05D003268 ORTHO05D003719 6.4e-31 138.7 150 50.0
CsaV3_1G038030 Cucumis sativus L. HOM05D003268 ORTHO05D003719 1.1e-30 137.9 247 40.9
MELO3C015242.2 Cucumis melo HOM05D003268 ORTHO05D003719 3.2e-30 136.3 249 39.4
Atru.chr12.1545 Acer truncatum HOM05D003268 ORTHO05D003719 5.4e-30 135.6 185 45.4
CANSAT54G2527 Cannabis sativa HOM05D003268 ORTHO05D003719 7.1e-30 135.2 274 37.6
Cc02_g35810 Coffea canephora HOM05D003268 ORTHO05D003719 1.6e-29 134.0 225 43.1
Haze_00767 Corylus avellana HOM05D003268 ORTHO05D003719 2.1e-29 133.7 159 48.4
Lj5P319T26 Lonicera japonica HOM05D003268 ORTHO05D003719 2.1e-29 133.7 194 45.4
Cpa.g.sc53.77 Carica papaya HOM05D003268 ORTHO05D003719 3.5e-29 132.9 174 43.1
Dinv30944 Davidia involucrata HOM05D003268 ORTHO05D003719 4.6e-29 132.5 208 42.8
RcHm_v2.0_Chr3g0458411 Rosa chinensis HOM05D003268 ORTHO05D003719 1.3e-28 131.0 167 47.3
Sc16g0009390 Simmondsia chinensis HOM05D003268 ORTHO05D003719 2.3e-28 130.2 208 40.4
CiPaw.07G035600 Carya illinoinensis HOM05D003268 ORTHO05D003719 3.0e-28 129.8 274 37.2
FvH4_6g08440 Fragaria vesca HOM05D003268 ORTHO05D003719 5.1e-28 129.0 222 41.0
FAN14G0797 Fragaria x ananassa HOM05D003268 ORTHO05D003719 5.1e-28 129.0 222 41.0
Ca_10197_v3 Cicer arietinum L. HOM05D003268 ORTHO05D003719 7.3e-27 125.2 189 39.7
Oeu023377.1 Olea europaea HOM05D003268 ORTHO05D003719 1.6e-26 124.0 215 40.0
Oeu023379.1 Olea europaea HOM05D003268 ORTHO05D003719 1.6e-26 124.0 215 40.0
Hma1.2p1_0759F.1_g213940 Hydrangea macrophylla HOM05D003268 ORTHO05D003719 2.1e-26 123.6 207 41.5
Lj5g0018140 Lotus japonicus HOM05D003268 ORTHO05D003719 2.1e-26 123.6 188 39.9
Nitab4.5_0002485g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 2.8e-26 123.2 189 43.4
Nitab4.5_0005904g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 3.6e-26 122.9 190 42.1
Medtr1g484850 Medicago truncatula HOM05D003268 ORTHO05D003719 6.2e-26 122.1 192 40.1
COL.COLO4_34517 Corchorus olitorius HOM05D003268 ORTHO05D003719 1.1e-25 121.3 224 37.9
Haze_03993 Corylus avellana HOM05D003268 ORTHO05D003719 1.1e-25 121.3 183 43.2
FAN02G3445 Fragaria x ananassa HOM05D003268 ORTHO05D003719 1.1e-25 121.3 212 39.6
Solyc01g101160.2 Solanum lycopersicum HOM05D003268 ORTHO05D003719 1.8e-25 120.6 184 40.2
Sopen01g044640 Solanum pennellii HOM05D003268 ORTHO05D003719 1.8e-25 120.6 184 40.2
FAN09G1400 Fragaria x ananassa HOM05D003268 ORTHO05D003719 2.4e-25 120.2 185 40.5
PGSC0003DMG400044126 Solanum tuberosum HOM05D003268 ORTHO05D003719 4.0e-25 119.4 182 40.7
MSTRG.16427 Avicennia marina HOM05D003268 ORTHO05D003719 5.3e-25 119.0 196 40.3
TAR636G0250 Trochodendron aralioides HOM05D003268 ORTHO05D003719 6.9e-25 118.6 176 42.0
Actinidia11688 Actinidia chinensis HOM05D003268 ORTHO05D003719 9.0e-25 118.2 226 38.1
Lj6P701T18 Lonicera japonica HOM05D003268 ORTHO05D003719 9.0e-25 118.2 209 38.3
THA.LOC104821812 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 9.0e-25 118.2 152 44.7
Atru.chr4.3150 Acer truncatum HOM05D003268 ORTHO05D003719 1.2e-24 117.9 169 41.4
CAN.G1248.20 Capsicum annuum HOM05D003268 ORTHO05D003719 1.5e-24 117.5 173 40.5
QL06p014213 Quercus lobata HOM05D003268 ORTHO05D003719 2.6e-24 116.7 189 39.2
TAR362G1252 Trochodendron aralioides HOM05D003268 ORTHO05D003719 4.5e-24 115.9 173 42.2
Lalb_Chr02g0147571 Lupinus albus HOM05D003268 ORTHO05D003719 5.8e-24 115.5 212 35.8
ECA240G0886 Erigeron canadensis HOM05D003268 ORTHO05D003719 9.9e-24 114.8 214 38.3
QL03p010269 Quercus lobata HOM05D003268 ORTHO05D003719 9.9e-24 114.8 191 40.3
QL03p010503 Quercus lobata HOM05D003268 ORTHO05D003719 9.9e-24 114.8 191 40.3
CSS0047817 Camellia sinensis var. sinensis HOM05D003268 ORTHO05D003719 1.3e-23 114.4 170 43.5
Gohir.D02G064200 Gossypium hirsutum HOM05D003268 ORTHO05D003719 1.3e-23 114.4 191 38.7
Gorai.005G072500 Gossypium raimondii HOM05D003268 ORTHO05D003719 1.3e-23 114.4 191 38.7
PGR031G0843 Punica granatum HOM05D003268 ORTHO05D003719 1.7e-23 114.0 221 36.2
Lalb_Chr06g0167311 Lupinus albus HOM05D003268 ORTHO05D003719 2.2e-23 113.6 258 33.3
Oeu016542.1 Olea europaea HOM05D003268 ORTHO05D003719 2.9e-23 113.2 215 38.6
SalBow4G1159 Salvia bowleyana HOM05D003268 ORTHO05D003719 2.9e-23 113.2 199 39.2
Cfa015729 Carpinus fangiana HOM05D003268 ORTHO05D003719 3.8e-23 112.8 157 42.7
TPR.G2590 Trifolium pratense HOM05D003268 ORTHO05D003719 3.8e-23 112.8 166 37.3
Psat6g155480 Pisum sativum HOM05D003268 ORTHO05D003719 6.4e-23 112.1 214 34.1
Dinv29508 Davidia involucrata HOM05D003268 ORTHO05D003719 8.4e-23 111.7 173 40.5
Glyma.10G143800 Glycine max HOM05D003268 ORTHO05D003719 8.4e-23 111.7 178 37.6
Gohir.A02G058400 Gossypium hirsutum HOM05D003268 ORTHO05D003719 8.4e-23 111.7 191 38.2
PSO170G4270 Papaver somniferum HOM05D003268 ORTHO05D003719 1.9e-22 110.5 173 39.3
MBI19_g47476_MAGBIO Magnolia biondii HOM05D003268 ORTHO05D003719 2.4e-22 110.2 174 44.3
Glyma.20G092502 Glycine max HOM05D003268 ORTHO05D003719 3.2e-22 109.8 158 39.2
TAR633G0292 Trochodendron aralioides HOM05D003268 ORTHO05D003719 3.2e-22 109.8 173 38.7
Potri.010G002200 Populus trichocarpa HOM05D003268 ORTHO05D003719 4.2e-22 109.4 185 38.9
SGA_v2.0_scaffold22G09705 Striga asiatica HOM05D003268 ORTHO05D003719 4.2e-22 109.4 250 34.0
unitig_8.g4507 Utricularia gibba HOM05D003268 ORTHO05D003719 4.2e-22 109.4 184 39.7
CiPaw.01G129300 Carya illinoinensis HOM05D003268 ORTHO05D003719 7.1e-22 108.6 203 37.4
Duzib212G0032 Durio zibethinus HOM05D003268 ORTHO05D003719 7.1e-22 108.6 184 37.5
VMungo0720G1780 Vigna mungo HOM05D003268 ORTHO05D003719 1.2e-21 107.8 188 35.1
Thecc.04G313000 Theobroma cacao HOM05D003268 ORTHO05D003719 1.6e-21 107.5 223 34.1
PSO761G0464 Papaver somniferum HOM05D003268 ORTHO05D003719 4.6e-21 105.9 177 37.3
Phvul.007G204700 Phaseolus vulgaris HOM05D003268 ORTHO05D003719 4.6e-21 105.9 215 33.5
Rhsim11G0103200 Rhododendron simsii HOM05D003268 ORTHO05D003719 7.9e-21 105.1 203 36.5
Sabra10G0001700 Salix brachista HOM05D003268 ORTHO05D003719 7.9e-21 105.1 175 40.0
PSO210G7784 Papaver somniferum HOM05D003268 ORTHO05D003719 1.0e-20 104.8 177 37.3
Manes.11G020800 Manihot esculenta HOM05D003268 ORTHO05D003719 1.3e-20 104.4 230 36.1
Migut.N00971 Erythranthe guttata HOM05D003268 ORTHO05D003719 2.3e-20 103.6 194 36.1
Sed0010166 Sechium edule HOM05D003268 ORTHO05D003719 3.0e-20 103.2 170 37.6
Aa31LG8G4410 Aethionema arabicum HOM05D002272 ORTHO05D005405 3.9e-20 102.8 199 38.2
vmacro01600 Vaccinium macrocarpon HOM05D003268 ORTHO05D003719 5.1e-20 102.4 217 35.9
Aa31LG1G5600 Aethionema arabicum HOM05D003268 ORTHO05D003719 6.7e-20 102.1 101 54.5
Ciclev10005819m.g Citrus clementina HOM05D003268 ORTHO05D003719 6.7e-20 102.1 194 36.6
HPP92_012769 Vanilla planifolia HOM05D003268 ORTHO05D003719 6.7e-20 102.1 247 36.4
Glyma.17G041900 Glycine max HOM05D003268 ORTHO05D003719 1.1e-19 101.3 178 36.0
Migut.B00893 Erythranthe guttata HOM05D003268 ORTHO05D003719 1.9e-19 100.5 188 34.0
Glyma.13G118100 Glycine max HOM05D003268 ORTHO05D003719 2.5e-19 100.1 195 33.8
Oeu020279.1 Olea europaea HOM05D003268 ORTHO05D003719 2.5e-19 100.1 164 38.4
MSTRG.20352 Avicennia marina HOM05D003268 ORTHO05D003719 3.3e-19 99.8 167 38.3
MELO3C006751.2 Cucumis melo HOM05D003268 ORTHO05D003719 3.3e-19 99.8 204 35.8
DCAR_001893 Daucus carota HOM05D003268 ORTHO05D003719 4.3e-19 99.4 209 33.5
HanXRQChr09g0250221 Helianthus annuus HOM05D003268 ORTHO05D003719 1.3e-18 97.8 190 36.8
VMungo1215G0793 Vigna mungo HOM05D003268 ORTHO05D003719 1.3e-18 97.8 169 37.3
Lalb_Chr13g0299031 Lupinus albus HOM05D003268 ORTHO05D003719 1.6e-18 97.4 173 37.6
Oeu034985.1 Olea europaea HOM05D003268 ORTHO05D003719 1.6e-18 97.4 172 37.2
Migut.O00762 Erythranthe guttata HOM05D003268 ORTHO05D003719 2.1e-18 97.1 179 34.6
RcHm_v2.0_Chr4g0427521 Rosa chinensis HOM05D003268 ORTHO05D003719 2.1e-18 97.1 211 35.1
Solyc03g114270.1 Solanum lycopersicum HOM05D003268 ORTHO05D003719 3.7e-18 96.3 152 36.2
Sopen03g033360 Solanum pennellii HOM05D003268 ORTHO05D003796 3.7e-18 96.3 152 36.2
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 3.7e-18 96.3 166 39.2
Phvul.003G123200 Phaseolus vulgaris HOM05D003268 ORTHO05D003719 4.8e-18 95.9 168 36.9
Ah.10g026900 Amaranthus hybridus HOM05D003268 ORTHO05D003719 6.2e-18 95.5 199 35.2
Aqoxy2G02513 Aquilegia oxysepala HOM05D003268 ORTHO05D003719 1.4e-17 94.4 169 36.1
BcaC09g48706 Brassica carinata HOM05D003268 ORTHO05D003719 1.4e-17 94.4 170 38.8
BolC1t04640H Brassica oleracea HOM05D003268 ORTHO05D003719 1.4e-17 94.4 170 38.8
Sed0001415 Sechium edule HOM05D003268 ORTHO05D003719 1.4e-17 94.4 172 38.4
TWI09G0361 Tripterygium wilfordii HOM05D003268 ORTHO05D003719 2.4e-17 93.6 165 36.4
BcaB04g20839 Brassica carinata HOM05D003268 ORTHO05D003719 4.0e-17 92.8 170 37.6
MD16G1136300 Malus domestica HOM05D003268 ORTHO05D003719 4.0e-17 92.8 220 33.2
SalBow5G1243 Salvia bowleyana HOM05D003268 ORTHO05D003719 4.0e-17 92.8 162 38.3
MD13G1139400 Malus domestica HOM05D003268 ORTHO05D003719 5.3e-17 92.4 201 35.3
BcaC09g48702 Brassica carinata HOM05D003268 ORTHO05D003719 9.0e-17 91.7 173 36.4
C01p46780 Brassica napus HOM05D003268 ORTHO05D003719 9.0e-17 91.7 173 36.4
BolC1t04651H Brassica oleracea HOM05D003268 ORTHO05D003719 9.0e-17 91.7 173 36.4
ECA234G2755 Erigeron canadensis HOM05D003268 ORTHO05D003719 9.0e-17 91.7 166 36.1
PGSC0003DMG400024495 Solanum tuberosum HOM05D003268 ORTHO05D003719 9.0e-17 91.7 152 34.9
HanXRQChr10g0294291 Helianthus annuus HOM05D003268 ORTHO05D003719 2.0e-16 90.5 174 34.5
Thhalv10022081m.g Eutrema salsugineum HOM05D003268 ORTHO05D003719 7.6e-16 88.6 198 34.8
PGSC0003DMG401019388 Solanum tuberosum HOM05D003268 ORTHO05D003719 7.6e-16 88.6 154 34.4
SHI00050 Sapria himalayana HOM05D002272 ORTHO05D005405 1.7e-15 87.4 187 34.2
HanXRQChr09g0248281 Helianthus annuus HOM05D003268 ORTHO05D003719 2.9e-15 86.7 181 35.4
Ca_21366_v3 Cicer arietinum L. HOM05D003268 ORTHO05D003719 6.5e-15 85.5 170 34.1
C01p46720 Brassica napus HOM05D003268 ORTHO05D003719 8.4e-15 85.1 156 37.8
Sopen10g005750 Solanum pennellii HOM05D003268 ORTHO05D003719 1.1e-14 84.7 175 34.3
Migut.B00880 Erythranthe guttata HOM05D003268 ORTHO05D003719 1.4e-14 84.3 194 31.4
Nitab4.5_0001808g0030 Nicotiana tabacum HOM05D003268 ORTHO05D003719 1.4e-14 84.3 154 36.4
Solyc10g011990.1 Solanum lycopersicum HOM05D003268 ORTHO05D003719 1.9e-14 84.0 175 34.3
BcaC05g28789 Brassica carinata HOM05D003268 ORTHO05D003719 2.5e-14 83.6 143 36.4
Nitab4.5_0000039g0190 Nicotiana tabacum HOM05D003268 ORTHO05D003719 4.2e-14 82.8 154 36.4
Lalb_Chr07g0181591 Lupinus albus HOM05D003268 ORTHO05D003719 5.5e-14 82.4 198 34.8
Potri.008G206600 Populus trichocarpa HOM05D003268 ORTHO05D003719 1.2e-13 81.3 133 37.6
Medtr4g124100 Medicago truncatula HOM05D003268 ORTHO05D003719 1.3e-12 77.8 157 32.5
A01p36890 Brassica napus HOM05D003268 ORTHO05D003719 3.9e-12 76.3 175 34.3
CsaV3_3G015530 Cucumis sativus L. HOM05D003268 ORTHO05D003719 3.9e-12 76.3 203 32.5
unitig_578.g15945 Utricularia gibba HOM05D003268 ORTHO05D003719 3.9e-12 76.3 84 41.7
TPR.G12613 Trifolium pratense HOM05D003268 ORTHO05D003719 1.9e-11 73.9 156 33.3
Lj4g0025064 Lotus japonicus HOM05D003268 ORTHO05D003719 2.5e-11 73.6 170 31.8
Psat0s1206g0240 Pisum sativum HOM05D003268 ORTHO05D003719 2.5e-11 73.6 158 34.2
BcaB06g25842 Brassica carinata HOM05D003268 ORTHO05D003719 3.3e-11 73.2 171 34.5
ATR0796G330 Amborella trichopoda HOM05D003268 ORTHO05D003719 5.7e-11 72.4 208 29.3
FAN05G0723 Fragaria x ananassa HOM05D003268 ORTHO05D003719 7.4e-11 72.0 69 47.8
Actinidia17741 Actinidia chinensis HOM05D003268 ORTHO05D003719 1.3e-10 71.2 117 42.7
CARHR092780 Cardamine hirsuta HOM05D003268 ORTHO05D003719 6.3e-10 68.9 202 29.7
HanXRQChr07g0197201 Helianthus annuus HOM05D003268 ORTHO05D003719 4.1e-09 66.2 170 28.2
Os05g0277200 Oryza sativa ssp. japonica HOM05D003268 ORTHO05D003719 1.3e-07 61.2 221 29.4


User provided reference genes

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