Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g07980 Schrenkiella parvula HOM05D009911 ORTHO05D009712 9.9e-92 340.1 174 100.0
Thhalv10009653m.g Eutrema salsugineum HOM05D009911 ORTHO05D009712 3.9e-64 248.4 173 75.1
C05p07380 Brassica napus HOM05D009911 ORTHO05D009712 1.1e-61 240.4 173 74.0
BraA06t23824Z Brassica rapa HOM05D009911 ORTHO05D009712 1.5e-60 236.5 173 71.1
A06p06110 Brassica napus HOM05D009911 ORTHO05D009712 2.2e-59 232.6 173 69.9
Carub.0001s0871 Capsella rubella HOM05D009911 ORTHO05D009712 5.5e-58 228.0 165 69.1
AL1G19880 Arabidopsis lyrata HOM05D009911 ORTHO05D009712 2.3e-56 222.6 173 65.9
AT1G09370 Arabidopsis thaliana HOM05D009911 ORTHO05D009712 1.3e-54 216.9 173 65.3
BolC5t29496H Brassica oleracea HOM05D009911 ORTHO05D009712 2.7e-49 199.1 171 64.9
C05p07390 Brassica napus HOM05D009911 ORTHO05D009712 2.3e-48 196.1 171 63.7
CARHR009330 Cardamine hirsuta HOM05D009911 ORTHO05D009712 6.7e-48 194.5 173 59.0
A06p06120 Brassica napus HOM05D009911 ORTHO05D009712 1.5e-47 193.4 171 63.7
BraA06t23825Z Brassica rapa HOM05D009911 ORTHO05D009712 1.5e-47 193.4 171 63.7
C05p07360 Brassica napus HOM05D009911 ORTHO05D009712 1.7e-46 189.9 171 59.1
BraA06t23818Z Brassica rapa HOM05D009911 ORTHO05D009712 2.8e-46 189.1 173 59.0
A06p06070 Brassica napus HOM05D009911 ORTHO05D009712 8.2e-46 187.6 173 58.4
C08p49490 Brassica napus HOM05D009911 ORTHO05D009712 8.2e-46 187.6 173 59.5
BcaC05g24790 Brassica carinata HOM05D009911 ORTHO05D009712 1.1e-45 187.2 173 59.0
BolC5t29493H Brassica oleracea HOM05D009911 ORTHO05D009712 1.1e-45 187.2 173 59.0
BcaC07g41882 Brassica carinata HOM05D009911 ORTHO05D009712 1.1e-42 177.2 173 57.8
THA.LOC104816853 Tarenaya hassleriana HOM05D009911 ORTHO05D009712 1.9e-42 176.4 172 54.1
BcaC07g41884 Brassica carinata HOM05D009911 ORTHO05D009712 1.6e-36 156.8 108 75.0
BolC5t29495H Brassica oleracea HOM05D009911 ORTHO05D009712 1.9e-26 123.2 90 74.4
A09p65510 Brassica napus HOM05D009911 ORTHO05D009712 2.8e-25 119.4 110 60.9
CARHR178520 Cardamine hirsuta HOM05D013394 ORTHO05D009712 1.7e-14 83.6 151 28.5
BraA09t41896Z Brassica rapa HOM05D009911 ORTHO05D009712 8.6e-11 71.2 66 57.6
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 8.6e-11 71.2 163 26.4
Sp1g07970 Schrenkiella parvula HOM05D013394 ORTHO05D009712 8.6e-11 71.2 176 28.4
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 2.5e-10 69.7 145 29.7
CARHR178500 Cardamine hirsuta HOM05D013394 ORTHO05D009712 1.2e-09 67.4 151 24.5
PGR031G3971 Punica granatum HOM05D008339 ORTHO05D009712 1.2e-09 67.4 145 29.0
Thhalv10009592m.g Eutrema salsugineum HOM05D013394 ORTHO05D009712 1.6e-09 67.0 162 26.5
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 8.0e-09 64.7 128 29.7
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 1.4e-08 63.9 144 27.8
SalBow7G3334 Salvia bowleyana HOM05D000059 ORTHO05D012084 4.0e-08 62.4 166 27.1
SalBow7G3223 Salvia bowleyana HOM05D009933 ORTHO05D012084 4.4e-07 58.9 157 26.8
CARHR158270 Cardamine hirsuta HOM05D009945 ORTHO05D012028 2.2e-06 56.6 172 26.2
Sp5g12740 Schrenkiella parvula HOM05D009945 ORTHO05D012028 2.2e-06 56.6 175 26.3
BcaB01g00725 Brassica carinata HOM05D009945 ORTHO05D012028 4.9e-06 55.5 160 26.2
A06p18400 Brassica napus HOM05D009945 ORTHO05D012028 4.9e-06 55.5 165 26.7
BraA06t24921Z Brassica rapa HOM05D009945 ORTHO05D012028 4.9e-06 55.5 165 26.7
AL5G29080 Arabidopsis lyrata HOM05D009945 ORTHO05D012028 8.3e-06 54.7 154 27.3
BcaC07g39575 Brassica carinata HOM05D009945 ORTHO05D012028 8.3e-06 54.7 165 26.1
C08p26270 Brassica napus HOM05D009945 ORTHO05D012028 8.3e-06 54.7 165 26.1
BolC8t50245H Brassica oleracea HOM05D009945 ORTHO05D012028 8.3e-06 54.7 165 26.1


User provided reference genes

Program Settings