Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 3.1e-193 678.3 353 100.0
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 2.0e-160 569.3 354 85.3
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 1.2e-155 553.5 352 83.8
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 3.2e-153 545.4 352 82.7
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 7.8e-152 540.8 352 82.1
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 3.0e-151 538.9 348 82.8
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 3.3e-150 535.4 352 81.5
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 5.6e-150 534.6 354 81.1
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 3.2e-145 518.8 358 77.9
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 3.5e-144 515.4 352 78.7
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 3.5e-144 515.4 352 78.7
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 1.3e-143 513.5 357 78.2
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 6.0e-136 488.0 348 73.3
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 1.1e-113 414.1 350 65.7
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 2.7e-96 356.3 362 55.2
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 8.2e-93 344.7 331 55.6
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 6.9e-92 341.7 345 56.5
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 3.4e-91 339.3 337 55.2
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 4.5e-91 339.0 347 54.5
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 1.0e-90 337.8 351 54.7
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 6.5e-90 335.1 356 53.9
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.4e-89 334.0 340 55.0
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 1.9e-89 333.6 334 54.5
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 3.2e-89 332.8 334 54.5
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 5.5e-89 332.0 345 53.9
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 9.3e-89 331.3 334 54.5
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 6.1e-88 328.6 329 54.4
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 1.8e-87 327.0 341 51.0
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 3.0e-87 326.2 359 52.4
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 1.9e-86 323.6 338 54.1
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 4.8e-85 318.9 378 50.5
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 6.3e-85 318.5 355 49.3
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 1.1e-84 317.8 328 54.9
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 1.4e-84 317.4 338 53.3
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 3.1e-84 316.2 329 54.7
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 5.3e-84 315.5 338 53.0
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 2.0e-83 313.5 344 52.3
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.0e-82 311.2 338 52.1
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 1.0e-82 311.2 328 54.0
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 2.2e-82 310.1 339 51.0
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 2.9e-82 309.7 339 51.6
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 2.9e-82 309.7 323 52.0
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 5.0e-82 308.9 352 50.6
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 8.5e-82 308.1 333 54.1
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 7.2e-81 305.1 334 52.1
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 7.2e-81 305.1 340 52.9
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.1e-80 303.5 324 53.7
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 3.6e-80 302.8 318 53.5
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 2.3e-79 300.1 339 51.3
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 2.3e-79 300.1 323 50.2
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 3.0e-79 299.7 320 53.1
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 5.1e-79 298.9 327 52.3
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 6.7e-79 298.5 330 50.9
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 8.8e-79 298.1 324 53.1
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 8.8e-79 298.1 327 50.5
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.1e-78 297.7 322 53.1
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 1.1e-78 297.7 327 53.5
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 4.4e-78 295.8 322 49.4
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 5.7e-78 295.4 326 52.5
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 7.4e-78 295.0 328 49.1
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 7.4e-78 295.0 335 51.3
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 9.7e-78 294.7 324 53.7
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 1.7e-77 293.9 325 49.2
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 2.8e-77 293.1 324 50.3
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 3.7e-77 292.7 339 51.6
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 4.8e-77 292.4 318 51.6
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 1.1e-76 291.2 341 47.8
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 6.9e-76 288.5 352 48.0
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 6.9e-76 288.5 348 47.4
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 2.0e-75 287.0 325 50.2
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 1.0e-74 284.6 341 49.0
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 3.8e-74 282.7 350 47.4
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 1.4e-73 280.8 327 51.1
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 3.2e-73 279.6 355 45.1
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 9.4e-73 278.1 323 49.2
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 3.6e-72 276.2 334 50.3
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 7.9e-72 275.0 346 46.8
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 1.4e-71 274.2 332 46.4
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 3.0e-71 273.1 326 48.5
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 3.0e-71 273.1 334 44.6
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 3.9e-71 272.7 335 48.7
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 2.0e-70 270.4 324 48.8
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 2.0e-70 270.4 441 39.7
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 2.6e-70 270.0 381 45.9
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 5.7e-70 268.9 346 46.0
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 2.8e-69 266.5 324 46.6
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 6.5e-66 255.4 244 57.0
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 4.7e-64 249.2 332 45.8
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 9.7e-62 241.5 316 45.3
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 9.7e-62 241.5 258 52.7
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 9.1e-60 235.0 284 46.1
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 2.2e-58 230.3 378 42.1
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 4.0e-55 219.5 244 52.5
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 2.0e-46 190.7 219 51.1
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 2.7e-43 180.3 427 32.6
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 5.9e-43 179.1 176 54.0
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 4.3e-41 172.9 371 30.2
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 4.4e-38 162.9 358 33.0
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 7.8e-35 152.1 137 58.4
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 1.9e-28 131.0 222 40.5
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 2.3e-26 124.0 306 34.6
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 3.6e-24 116.7 96 60.4
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 2.4e-20 104.0 78 67.9
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 1.0e-18 98.6 102 54.9
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 1.0e-18 98.6 112 48.2
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 6.6e-18 95.9 77 61.0
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 1.9e-17 94.4 472 23.7
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 1.6e-16 91.3 251 29.1
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 2.1e-16 90.9 222 32.9
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 4.7e-16 89.7 84 56.0
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 1.8e-15 87.8 185 34.1
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 2.9e-13 80.5 84 53.6
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 5.4e-12 76.3 60 61.7
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 9.2e-12 75.5 49 63.3
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 3.5e-11 73.6 137 33.6
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 6.0e-11 72.8 40 75.0
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 7.8e-11 72.4 200 27.0
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 1.7e-10 71.2 54 55.6
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 3.0e-10 70.5 196 27.0
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 1.8e-07 61.2 43 65.1


User provided reference genes

Program Settings