Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 1.5e-306 1055.4 546 100.0
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 8.6e-275 949.9 571 86.5
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 7.3e-266 920.2 549 86.3
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 8.9e-264 913.3 546 86.4
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 3.9e-259 897.9 547 85.4
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 4.3e-250 867.8 543 81.6
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 2.1e-249 865.5 534 84.3
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 7.6e-247 857.1 544 82.0
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 1.3e-246 856.3 498 87.3
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 4.9e-246 854.4 534 82.8
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 8.4e-230 800.4 539 79.2
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 1.7e-222 776.2 546 72.9
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 4.1e-184 648.7 365 91.5
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 5.2e-163 578.6 548 57.8
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 8.3e-161 571.2 542 56.3
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 3.5e-159 565.8 558 55.9
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 3.6e-156 555.8 530 55.1
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 7.5e-154 548.1 558 55.6
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 2.2e-153 546.6 570 53.5
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 3.7e-153 545.8 543 53.2
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 1.9e-152 543.5 556 54.9
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 9.2e-152 541.2 551 54.6
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 1.7e-150 537.0 543 56.2
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 5.6e-149 531.9 540 54.4
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 1.2e-148 530.8 499 57.5
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 3.1e-147 526.2 579 51.8
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 3.1e-147 526.2 522 53.8
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 2.9e-145 519.6 547 52.8
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 6.4e-145 518.5 547 52.7
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 1.1e-144 517.7 559 52.8
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 4.1e-144 515.8 547 52.3
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 2.7e-143 513.1 543 51.4
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 2.7e-143 513.1 557 51.9
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 3.9e-142 509.2 551 52.3
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 3.9e-142 509.2 458 59.0
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 1.1e-141 507.7 552 50.0
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 3.6e-140 502.7 549 49.7
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 1.8e-139 500.4 566 50.5
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 1.8e-139 500.4 572 51.0
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 3.1e-139 499.6 516 54.5
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 4.4e-138 495.7 549 51.7
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 6.4e-137 491.9 537 50.7
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 9.2e-136 488.0 583 51.1
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 3.0e-134 483.0 567 50.3
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 9.6e-133 478.0 483 56.5
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 2.1e-132 476.9 489 54.6
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 3.6e-132 476.1 560 48.9
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 3.1e-131 473.0 555 49.0
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 7.6e-130 468.4 557 48.5
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 1.3e-129 467.6 557 49.7
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 1.7e-129 467.2 508 52.0
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 3.8e-129 466.1 510 53.3
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 4.9e-129 465.7 554 48.4
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 1.4e-128 464.2 542 48.2
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 1.9e-128 463.8 555 47.9
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 3.2e-128 463.0 555 47.9
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 1.2e-127 461.1 555 49.0
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 2.1e-127 460.3 549 48.1
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 2.7e-127 459.9 575 47.7
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 6.0e-127 458.8 552 48.4
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 3.0e-126 456.4 551 47.7
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 6.6e-126 455.3 539 49.7
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 3.3e-125 453.0 540 48.1
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 3.3e-125 453.0 540 48.1
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 1.3e-124 451.1 553 46.7
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 8.1e-124 448.4 555 47.0
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 4.2e-120 436.0 528 47.0
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.1e-117 427.9 540 47.6
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 1.2e-111 407.9 460 48.7
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 4.5e-106 389.4 566 41.7
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.0e-105 388.3 550 44.2
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 1.0e-105 388.3 377 55.2
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 1.8e-99 367.5 555 39.5
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 2.0e-98 364.0 361 54.0
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 5.9e-90 335.9 567 36.9
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 2.2e-89 334.0 577 37.4
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 1.6e-87 327.8 365 52.3
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 2.3e-86 323.9 556 38.3
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 8.8e-86 322.0 542 39.9
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 3.7e-84 316.6 303 57.8
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 1.1e-83 315.1 386 51.3
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 4.5e-82 309.7 378 47.9
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 6.7e-78 295.8 186 82.3
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 2.0e-66 257.7 588 31.8
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 1.0e-65 255.4 385 46.0
Haze_25193 Corylus avellana HOM05D007729 ORTHO05D009724 2.4e-43 181.0 187 55.6
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 7.8e-34 149.4 162 49.4
Haze_15474 Corylus avellana HOM05D000683 ORTHO05D000507 6.8e-30 136.3 116 61.2
Haze_25604 Corylus avellana HOM05D007729 ORTHO05D009724 1.2e-23 115.5 123 55.3
MD12G1208200 Malus domestica HOM05D007729 ORTHO05D009724 5.1e-17 93.6 119 43.7
CBR_g1071 Chara braunii HOM05D036030 ORTHO05D009724 3.1e-06 57.8 165 26.7


User provided reference genes

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