Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g07730 Schrenkiella parvula HOM05D005943 ORTHO05D007328 1.4e-99 366.3 182 100.0
CARHR009020 Cardamine hirsuta HOM05D005943 ORTHO05D007328 4.3e-98 361.3 182 97.8
Thhalv10008886m.g Eutrema salsugineum HOM05D005943 ORTHO05D007328 4.3e-98 361.3 182 97.8
BcaC05g24766 Brassica carinata HOM05D005943 ORTHO05D007328 4.8e-97 357.8 182 96.7
AL1G19590 Arabidopsis lyrata HOM05D005943 ORTHO05D007328 8.2e-97 357.1 182 96.7
Carub.0001s0844 Capsella rubella HOM05D005943 ORTHO05D007328 1.4e-96 356.3 182 96.7
AT1G09150 Arabidopsis thaliana HOM05D005943 ORTHO05D007328 1.8e-96 355.9 182 96.2
BraA06t23801Z Brassica rapa HOM05D005943 ORTHO05D007328 5.0e-94 347.8 177 96.0
THA.LOC104805894 Tarenaya hassleriana HOM05D005943 ORTHO05D007328 2.5e-93 345.5 182 90.7
THA.LOC104820740 Tarenaya hassleriana HOM05D005943 ORTHO05D007328 7.2e-93 344.0 178 93.8
C08p12470 Brassica napus HOM05D005943 ORTHO05D007328 6.1e-92 340.9 174 94.8
A06p05940 Brassica napus HOM05D005943 ORTHO05D007328 7.9e-92 340.5 174 95.4
C05p07140 Brassica napus HOM05D005943 ORTHO05D007328 7.9e-92 340.5 174 95.4
A08p34800 Brassica napus HOM05D005943 ORTHO05D007328 1.4e-91 339.7 174 94.3
C08p12460 Brassica napus HOM05D005943 ORTHO05D007328 8.8e-91 337.0 174 93.7
BolC8t48886H Brassica oleracea HOM05D005943 ORTHO05D007328 1.1e-90 336.7 173 94.2
Cc02_g34350 Coffea canephora HOM05D005943 ORTHO05D007328 1.1e-88 330.1 182 87.4
Potri.013G013700 Populus trichocarpa HOM05D005943 ORTHO05D007328 1.1e-88 330.1 182 89.0
AUR62005222 Chenopodium quinoa HOM05D005943 ORTHO05D007328 3.1e-88 328.6 182 88.5
Potri.005G023600 Populus trichocarpa HOM05D005943 ORTHO05D007328 3.1e-88 328.6 182 88.5
Sed0027178 Sechium edule HOM05D005943 ORTHO05D007328 1.2e-87 326.6 182 87.4
Lalb_Chr23g0271691 Lupinus albus HOM05D005943 ORTHO05D007328 1.6e-87 326.2 182 86.8
CiPaw.07G023200 Carya illinoinensis HOM05D005943 ORTHO05D007328 2.0e-87 325.9 182 87.4
Gorai.007G301600 Gossypium raimondii HOM05D005943 ORTHO05D007328 3.5e-87 325.1 182 86.8
Duzib177G0451 Durio zibethinus HOM05D005943 ORTHO05D007328 5.9e-87 324.3 182 86.8
Ciclev10002634m.g Citrus clementina HOM05D005943 ORTHO05D007328 7.7e-87 323.9 182 87.4
Gohir.A11G269200 Gossypium hirsutum HOM05D005943 ORTHO05D007328 7.7e-87 323.9 182 86.3
Gohir.D11G279400 Gossypium hirsutum HOM05D005943 ORTHO05D007328 7.7e-87 323.9 182 86.3
Manes.08G116100 Manihot esculenta HOM05D005943 ORTHO05D007328 7.7e-87 323.9 182 86.3
Solyc01g099890.3 Solanum lycopersicum HOM05D005943 ORTHO05D007328 7.7e-87 323.9 182 89.0
Sopen01g043410 Solanum pennellii HOM05D005943 ORTHO05D007328 7.7e-87 323.9 182 89.0
TWI56G0702 Tripterygium wilfordii HOM05D005943 ORTHO05D007328 7.7e-87 323.9 182 86.8
Lj1g0013041 Lotus japonicus HOM05D005943 ORTHO05D007328 1.0e-86 323.6 182 87.4
ECA236G0332 Erigeron canadensis HOM05D005943 ORTHO05D007328 1.3e-86 323.2 182 86.8
PSO170G5805 Papaver somniferum HOM05D005943 ORTHO05D007328 1.3e-86 323.2 182 86.8
PSO407G0008 Papaver somniferum HOM05D005943 ORTHO05D007328 1.3e-86 323.2 182 86.8
Phvul.009G047900 Phaseolus vulgaris HOM05D005943 ORTHO05D007328 1.3e-86 323.2 182 86.3
Cpa.g.sc48.107 Carica papaya HOM05D005943 ORTHO05D007328 1.7e-86 322.8 182 87.4
Dinv40356 Davidia involucrata HOM05D005943 ORTHO05D007328 1.7e-86 322.8 182 86.3
Psat3g152320 Pisum sativum HOM05D005943 ORTHO05D007328 1.7e-86 322.8 182 86.3
Thecc.05G315300 Theobroma cacao HOM05D005943 ORTHO05D007328 1.7e-86 322.8 182 86.3
Ca_16733_v3 Cicer arietinum L. HOM05D005943 ORTHO05D007328 2.2e-86 322.4 182 86.3
Lalb_Chr11g0067091 Lupinus albus HOM05D005943 ORTHO05D007328 2.2e-86 322.4 182 84.6
MSTRG.4510 Avicennia marina HOM05D005943 ORTHO05D007328 2.9e-86 322.0 182 85.7
CsaV3_1G038680 Cucumis sativus L. HOM05D005943 ORTHO05D007328 2.9e-86 322.0 182 85.7
Glyma.06G132000 Glycine max HOM05D005943 ORTHO05D007328 2.9e-86 322.0 182 85.7
HanXRQChr11g0339821 Helianthus annuus HOM05D005943 ORTHO05D007328 2.9e-86 322.0 182 86.8
Aqoxy5G00777 Aquilegia oxysepala HOM05D005943 ORTHO05D007328 3.8e-86 321.6 182 86.8
CANSAT35G1584 Cannabis sativa HOM05D005943 ORTHO05D007328 3.8e-86 321.6 182 86.8
QL03p019642 Quercus lobata HOM05D005943 ORTHO05D007328 5.0e-86 321.2 181 86.2
Migut.E01764 Erythranthe guttata HOM05D005943 ORTHO05D007328 6.5e-86 320.9 182 85.7
Glyma.04G232900 Glycine max HOM05D005943 ORTHO05D007328 8.5e-86 320.5 182 85.7
MD12G1211900 Malus domestica HOM05D005943 ORTHO05D007328 8.5e-86 320.5 182 86.3
Os01g0314300 Oryza sativa ssp. japonica HOM05D005943 ORTHO05D007328 1.1e-85 320.1 182 85.7
RcHm_v2.0_Chr3g0456101 Rosa chinensis HOM05D005943 ORTHO05D007328 1.1e-85 320.1 182 86.3
GSVIVG01031169001 Vitis vinifera HOM05D005943 ORTHO05D007328 1.1e-85 320.1 182 85.2
COL.COLO4_10548 Corchorus olitorius HOM05D005943 ORTHO05D007328 1.5e-85 319.7 179 87.2
Dinv30834 Davidia involucrata HOM05D005943 ORTHO05D007328 1.5e-85 319.7 182 85.2
MD04G1198400 Malus domestica HOM05D005943 ORTHO05D007328 1.5e-85 319.7 182 85.7
TPR.G33656 Trifolium pratense HOM05D005943 ORTHO05D007328 1.5e-85 319.7 181 85.6
PGR031G0471 Punica granatum HOM05D005943 ORTHO05D007328 1.9e-85 319.3 180 85.0
Sc06g0003910 Simmondsia chinensis HOM05D005943 ORTHO05D007328 1.9e-85 319.3 182 84.1
unitig_0.g32 Utricularia gibba HOM05D005943 ORTHO05D007328 1.9e-85 319.3 180 85.0
CSS0008719 Camellia sinensis var. sinensis HOM05D005943 ORTHO05D007328 3.2e-85 318.5 182 85.2
Haze_04120 Corylus avellana HOM05D005943 ORTHO05D007328 1.2e-84 316.6 178 86.0
Medtr3g091920 Medicago truncatula HOM05D005943 ORTHO05D007328 1.2e-84 316.6 179 86.0
PGSC0003DMG400024722 Solanum tuberosum HOM05D005943 ORTHO05D007328 1.6e-84 316.2 182 86.8
BcaC07g38477 Brassica carinata HOM05D005943 ORTHO05D007328 2.1e-84 315.8 183 87.4
Prupe.6G319400 Prunus persica HOM05D005943 ORTHO05D007328 3.6e-84 315.1 182 84.6
Eucgr.L02935 Eucalyptus grandis HOM05D005943 ORTHO05D007328 4.7e-84 314.7 177 85.9
Hund07108 Selenicereus undatus HOM05D005943 ORTHO05D007328 4.7e-84 314.7 178 86.0
HPP92_018258 Vanilla planifolia HOM05D005943 ORTHO05D007328 6.1e-84 314.3 182 83.5
DCAR_022176 Daucus carota HOM05D005943 ORTHO05D007328 8.0e-84 313.9 194 81.4
CDE02G2801 Ceratophyllum demersum HOM05D005943 ORTHO05D007328 1.0e-83 313.5 182 83.0
Sabra13G0012200 Salix brachista HOM05D001727 ORTHO05D007328 1.0e-83 313.5 176 85.8
Lsat_1_v5_gn_7_72860 Lactuca sativa HOM05D005943 ORTHO05D007328 1.4e-83 313.2 179 84.9
Nn3g21529 Nelumbo nucifera HOM05D005943 ORTHO05D007328 2.3e-83 312.4 182 82.4
Sed0012379 Sechium edule HOM05D005943 ORTHO05D007328 4.0e-83 311.6 178 84.8
SGA_v2.0_scaffold42G16032 Striga asiatica HOM05D005943 ORTHO05D007328 2.0e-82 309.3 197 78.2
TWI12G0949 Tripterygium wilfordii HOM05D005943 ORTHO05D007328 2.6e-82 308.9 172 87.8
ATR0796G119 Amborella trichopoda HOM05D005943 ORTHO05D007328 9.7e-82 307.0 176 84.7
Nn4g25770 Nelumbo nucifera HOM05D005943 ORTHO05D007328 9.7e-82 307.0 176 84.1
Oeu048875.1 Olea europaea HOM05D005943 ORTHO05D007328 1.3e-81 306.6 182 82.4
Sabra05G0029200 Salix brachista HOM05D001727 ORTHO05D050481 1.3e-81 306.6 173 86.7
Mapoly0028s0141 Marchantia polymorpha HOM05D005943 ORTHO05D007328 2.2e-81 305.8 182 82.4
EL10Ac4g09897 Beta vulgaris HOM05D005943 ORTHO05D007328 1.1e-80 303.5 182 83.5
Atru.chr2.102 Acer truncatum HOM05D001727 ORTHO05D001758 1.4e-80 303.1 172 85.5
MELO3C015293.2 Cucumis melo HOM05D001727 ORTHO05D001758 1.4e-80 303.1 173 83.8
Duzib128G1848 Durio zibethinus HOM05D005943 ORTHO05D007328 1.8e-80 302.8 176 84.1
Rhsim05G0137500 Rhododendron simsii HOM05D005943 ORTHO05D007328 2.4e-80 302.4 202 75.2
AagrBONN_evm.TU.Sc2ySwM_228.5507 Anthoceros agrestis HOM05D005943 ORTHO05D007328 5.3e-80 301.2 176 83.0
Pp3c25_690 Physcomitrium patens HOM05D005943 ORTHO05D007328 9.1e-80 300.4 182 79.7
Aa31sc55G100 Aethionema arabicum HOM05D005943 ORTHO05D007328 2.7e-79 298.9 155 94.8
Peaxi162Scf00037g01419 Petunia axillaris HOM05D005943 ORTHO05D007328 6.5e-78 294.3 178 83.7
MD04G1083700 Malus domestica HOM05D005943 ORTHO05D007328 3.6e-76 288.5 208 72.1
Nitab4.5_0003113g0010 Nicotiana tabacum HOM05D005943 ORTHO05D007328 3.0e-75 285.4 182 80.2
BraA08t35391Z Brassica rapa HOM05D005943 ORTHO05D007328 4.4e-74 281.6 139 95.7
VMungo1309G2765 Vigna mungo HOM05D005943 ORTHO05D007328 4.8e-73 278.1 153 85.6
Nitab4.5_0003497g0010 Nicotiana tabacum HOM05D005943 ORTHO05D007328 3.5e-71 271.9 157 86.6
arahy.Tifrunner.gnm1.ann1.KZ6QJ9 Arachis hypogaea HOM05D005943 ORTHO05D007328 4.5e-71 271.6 155 84.5
AUR62000742 Chenopodium quinoa HOM05D005943 ORTHO05D007328 3.8e-70 268.5 155 84.5
FAN02G3650 Fragaria x ananassa HOM05D005943 ORTHO05D007328 3.8e-70 268.5 182 73.6
CDE09G0522 Ceratophyllum demersum HOM05D005943 ORTHO05D007328 5.5e-69 264.6 149 83.2
SMO169G0068 Selaginella moellendorffii HOM05D005943 ORTHO05D007328 9.4e-69 263.8 182 72.0
FAN09G2521 Fragaria x ananassa HOM05D005943 ORTHO05D007328 2.7e-68 262.3 177 74.0
Lj7A623G46 Lonicera japonica HOM05D005943 ORTHO05D007328 1.8e-67 259.6 151 85.4
Atru.chr6.2339 Acer truncatum HOM05D005943 ORTHO05D007328 7.0e-64 247.7 181 70.7
Zm00001eb339860 Zea mays HOM05D005943 ORTHO05D007328 4.3e-61 238.4 130 86.9
FvH4_6g06770 Fragaria vesca HOM05D005943 ORTHO05D007328 9.5e-61 237.3 186 68.3
vmacro19698 Vaccinium macrocarpon HOM05D005943 ORTHO05D007328 5.2e-59 231.5 127 85.0
arahy.Tifrunner.gnm1.ann1.2NZ4WG Arachis hypogaea HOM05D000716 ORTHO05D004822 1.7e-57 226.5 126 84.1
PRCOL_00003880 Prasinoderma coloniale HOM05D005943 ORTHO05D007328 4.1e-56 221.9 184 57.6
MCO12G098 Micromonas commoda HOM05D005943 ORTHO05D007328 3.3e-53 212.2 185 56.8
SalBow1G5257 Salvia bowleyana HOM05D005943 ORTHO05D007328 9.5e-53 210.7 155 69.7
Haze_26177 Corylus avellana HOM05D005943 ORTHO05D007328 3.6e-52 208.8 177 54.8
Phvul.009G047833 Phaseolus vulgaris HOM05D005943 ORTHO05D007328 5.8e-50 201.4 105 91.4
Eucgr.H03253 Eucalyptus grandis HOM05D005943 ORTHO05D007328 1.9e-48 196.4 105 87.6
MBI18_g25341_MAGBIO Magnolia biondii HOM05D005943 ORTHO05D007328 1.2e-47 193.7 105 86.7
TAR362G1289 Trochodendron aralioides HOM05D005943 ORTHO05D007328 6.0e-47 191.4 105 85.7
BcaC07g38474 Brassica carinata HOM05D005943 ORTHO05D007328 4.3e-45 185.3 92 96.7
SEGI_36457 Sequoiadendron giganteum HOM05D005943 ORTHO05D007328 2.3e-43 179.5 100 84.0
HPP92_018260 Vanilla planifolia HOM05D005943 ORTHO05D007328 5.8e-42 174.9 100 83.0
Duzib106G1343 Durio zibethinus HOM05D005943 ORTHO05D007328 1.2e-39 167.2 179 54.2
TAR633G1587 Trochodendron aralioides HOM05D005943 ORTHO05D007328 3.9e-38 162.2 154 57.8
Eucgr.H03239 Eucalyptus grandis HOM05D005943 ORTHO05D007328 5.1e-38 161.8 92 83.7
CBR_g36436 Chara braunii HOM05D005943 ORTHO05D007328 8.6e-38 161.0 91 78.0
Eucgr.H03249 Eucalyptus grandis HOM05D005943 ORTHO05D007328 2.1e-36 156.4 86 83.7
Cre50.g761397 Chlamydomonas reinhardtii HOM05D005943 ORTHO05D007328 9.9e-34 147.5 127 59.1
Eucgr.H03245 Eucalyptus grandis HOM05D005943 ORTHO05D007328 2.5e-29 132.9 92 72.8
ClCG03G017220 Citrullus lanatus HOM05D001727 ORTHO05D001758 3.1e-27 125.9 66 86.4
CBR_g20980 Chara braunii HOM05D005943 ORTHO05D007328 8.9e-27 124.4 87 72.4
EL10Ac5g11162 Beta vulgaris HOM05D005943 ORTHO05D007328 1.0e-22 110.9 77 76.6
Eucgr.H03250 Eucalyptus grandis HOM05D005943 ORTHO05D007328 2.8e-20 102.8 70 74.3
Nn1g03974 Nelumbo nucifera HOM05D005943 ORTHO05D007328 3.2e-16 89.4 48 83.3
Cc10_g16050 Coffea canephora HOM05D005117 ORTHO05D005956 5.1e-14 82.0 182 30.8
SGA_v2.0_scaffold443G51687 Striga asiatica HOM05D005117 ORTHO05D005956 1.9e-13 80.1 181 30.9
SMO364G0365 Selaginella moellendorffii HOM05D005117 ORTHO05D005956 2.5e-13 79.7 180 30.6
GSVIVG01037192001 Vitis vinifera HOM05D005117 ORTHO05D005956 4.3e-13 79.0 183 31.1
arahy.Tifrunner.gnm1.ann1.T5KNPK Arachis hypogaea HOM05D005117 ORTHO05D005956 7.4e-13 78.2 185 29.7
Cre03.g168605 Chlamydomonas reinhardtii HOM05D005943 ORTHO05D007328 7.4e-13 78.2 52 65.4
Hma1.2p1_0016F.1_g010920 Hydrangea macrophylla HOM05D005117 ORTHO05D005956 1.3e-12 77.4 181 30.4
HPP92_019136 Vanilla planifolia HOM05D005117 ORTHO05D005956 1.3e-12 77.4 182 29.7
MSTRG.25503 Avicennia marina HOM05D005117 ORTHO05D005956 2.1e-12 76.6 182 30.8
HPP92_019134 Vanilla planifolia HOM05D005117 ORTHO05D005956 2.8e-12 76.3 182 29.7
Phvul.011G215800 Phaseolus vulgaris HOM05D005117 ORTHO05D005956 8.1e-12 74.7 182 31.3
CsaV3_2G033280 Cucumis sativus L. HOM05D005117 ORTHO05D005956 1.4e-11 73.9 181 29.3
SalBow7G0613 Salvia bowleyana HOM05D005117 ORTHO05D005956 1.4e-11 73.9 182 29.1
CiPaw.03G013100 Carya illinoinensis HOM05D005117 ORTHO05D005956 2.4e-11 73.2 182 29.1
SEGI_40081 Sequoiadendron giganteum HOM05D005943 ORTHO05D007328 3.1e-11 72.8 49 75.5
VMungo1127G0019 Vigna mungo HOM05D005117 ORTHO05D005956 4.0e-11 72.4 182 30.2
Actinidia23299 Actinidia chinensis HOM05D005117 ORTHO05D005956 2.6e-10 69.7 181 28.2
TWI12G0486 Tripterygium wilfordii HOM05D005117 ORTHO05D005956 4.5e-10 68.9 182 29.1
arahy.Tifrunner.gnm1.ann1.H62643 Arachis hypogaea HOM05D005117 ORTHO05D005956 5.8e-10 68.6 159 30.2
Manes.18G111600 Manihot esculenta HOM05D005117 ORTHO05D005956 1.3e-09 67.4 182 27.5
CBR_g6708 Chara braunii HOM05D005117 ORTHO05D005956 4.9e-09 65.5 180 30.0
Sc06g0000080 Simmondsia chinensis HOM05D005117 ORTHO05D005956 6.4e-09 65.1 182 26.9
Glyma.09G001900 Glycine max HOM05D005117 ORTHO05D005956 2.7e-07 59.7 137 30.7
MELO3C008099.2 Cucumis melo HOM05D005117 ORTHO05D005956 3.0e-06 56.2 112 31.2


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