Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g06830 Schrenkiella parvula HOM05D010843 ORTHO05D012975 9.2e-43 176.8 110 100.0
A08p35300 Brassica napus HOM05D010843 ORTHO05D012975 8.9e-38 160.2 110 75.5
BraA08t35439Z Brassica rapa HOM05D010843 ORTHO05D012975 1.5e-37 159.5 110 75.5
C08p03530 Brassica napus HOM05D010843 ORTHO05D012975 2.6e-37 158.7 110 76.4
BolC8t47157H Brassica oleracea HOM05D010843 ORTHO05D012975 2.6e-37 158.7 110 76.4
Thhalv10009156m.g Eutrema salsugineum HOM05D010843 ORTHO05D012975 2.2e-36 155.6 112 87.5
CARHR008010 Cardamine hirsuta HOM05D010843 ORTHO05D012975 5.4e-35 151.0 113 77.9
AL1G18590 Arabidopsis lyrata HOM05D010843 ORTHO05D012975 1.6e-34 149.4 112 71.4
C05p06300 Brassica napus HOM05D010843 ORTHO05D012975 4.6e-34 147.9 110 78.2
BcaC05g24738 Brassica carinata HOM05D010843 ORTHO05D012975 1.0e-33 146.7 111 80.2
A06p05240 Brassica napus HOM05D010843 ORTHO05D012975 1.0e-33 146.7 110 70.9
BolC5t29387H Brassica oleracea HOM05D010843 ORTHO05D012975 1.0e-33 146.7 111 80.2
BraA06t23731Z Brassica rapa HOM05D010843 ORTHO05D012975 1.0e-33 146.7 110 70.9
AT1G08180 Arabidopsis thaliana HOM05D010843 ORTHO05D012975 3.9e-33 144.8 80 90.0
Carub.0001s0754 Capsella rubella HOM05D010843 ORTHO05D012975 4.3e-32 141.4 110 75.5
BcaB07g34064 Brassica carinata HOM05D010843 ORTHO05D012975 7.3e-32 140.6 110 80.0
BcaB03g13350 Brassica carinata HOM05D010843 ORTHO05D012975 9.2e-19 97.1 77 70.1
BcaB03g13351 Brassica carinata HOM05D010843 ORTHO05D012975 2.1e-18 95.9 76 68.4
THA.LOC104827410 Tarenaya hassleriana HOM05D010843 ORTHO05D012975 6.2e-15 84.3 65 67.7
Manes.11G153500 Manihot esculenta HOM05D005304 ORTHO05D004438 3.6e-07 58.5 75 46.7
Nn6g35176 Nelumbo nucifera HOM05D005304 ORTHO05D004438 4.8e-07 58.2 68 51.5
Gohir.A07G105600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 8.1e-07 57.4 82 43.9
Gohir.A05G084500 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.1e-06 57.0 79 45.6
Duzib168G0406 Durio zibethinus HOM05D005304 ORTHO05D004438 1.4e-06 56.6 69 46.4
Gohir.D07G109600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.8e-06 56.2 82 45.1
Nn2g13894 Nelumbo nucifera HOM05D005304 ORTHO05D004438 1.8e-06 56.2 81 43.2
Gohir.D05G087300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 2.4e-06 55.8 79 45.6
Gorai.009G089100 Gossypium raimondii HOM05D005304 ORTHO05D004438 2.4e-06 55.8 79 45.6
Atru.chr12.921 Acer truncatum HOM05D005304 ORTHO05D004438 3.1e-06 55.5 80 41.2
CiPaw.13G144100 Carya illinoinensis HOM05D005304 ORTHO05D004438 4.0e-06 55.1 78 42.3
Ciclev10029845m.g Citrus clementina HOM05D005304 ORTHO05D004438 4.0e-06 55.1 72 45.8
Aqoxy2G01602 Aquilegia oxysepala HOM05D005304 ORTHO05D004438 5.3e-06 54.7 55 56.4
Duzib150G0717 Durio zibethinus HOM05D005304 ORTHO05D004438 5.3e-06 54.7 68 47.1
Thecc.09G296200 Theobroma cacao HOM05D005304 ORTHO05D004438 5.3e-06 54.7 68 48.5
Manes.04G012000 Manihot esculenta HOM05D005304 ORTHO05D004438 6.9e-06 54.3 58 50.0
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 9.0e-06 53.9 55 50.9


User provided reference genes

Program Settings