Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 1.1e-145 520.0 264 100.0
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 9.7e-123 443.7 264 83.7
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 1.0e-108 397.1 283 75.3
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 1.0e-108 397.1 283 75.3
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 1.3e-106 390.2 266 78.2
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 2.4e-105 386.0 266 78.6
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 2.4e-105 386.0 266 78.6
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 7.0e-105 384.4 266 78.2
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 2.6e-104 382.5 294 71.4
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 1.7e-103 379.8 294 71.1
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 1.7e-103 379.8 265 76.6
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 2.8e-98 362.5 263 74.9
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 3.1e-97 359.0 263 74.1
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 1.7e-95 353.2 262 74.0
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 8.0e-93 344.4 262 71.4
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 1.7e-79 300.1 265 64.5
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 6.6e-71 271.6 273 57.9
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 8.6e-55 218.0 169 71.0
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 3.3e-54 216.1 279 50.5
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 2.8e-53 213.0 261 50.2
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 2.6e-51 206.5 263 50.6
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 1.7e-50 203.8 266 47.7
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 2.2e-50 203.4 265 50.9
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.2e-50 203.4 265 50.6
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 2.9e-50 203.0 260 50.0
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 3.7e-50 202.6 263 48.3
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 4.9e-50 202.2 267 50.2
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 6.4e-50 201.8 225 54.2
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 1.9e-49 200.3 267 48.7
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.4e-49 199.9 265 50.2
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 9.2e-49 198.0 273 46.5
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 9.2e-49 198.0 262 46.9
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 1.6e-48 197.2 267 47.9
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 1.6e-48 197.2 274 47.1
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 2.7e-48 196.4 250 49.6
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 2.7e-48 196.4 261 49.8
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 3.5e-48 196.1 250 49.6
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 6.0e-48 195.3 265 49.8
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 7.8e-48 194.9 270 48.1
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 1.0e-47 194.5 250 49.6
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 3.9e-47 192.6 265 47.5
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 1.1e-46 191.0 112 90.2
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 1.1e-46 191.0 234 50.0
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 1.9e-46 190.3 260 47.3
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.5e-46 189.9 266 50.0
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 3.3e-46 189.5 259 46.7
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 3.3e-46 189.5 254 48.4
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 4.3e-46 189.1 271 46.1
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 4.3e-46 189.1 231 50.2
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 5.6e-46 188.7 235 49.8
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 7.3e-46 188.3 235 49.8
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 7.3e-46 188.3 272 47.1
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 9.6e-46 188.0 263 45.6
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 9.6e-46 188.0 262 46.6
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 1.2e-45 187.6 271 46.1
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 2.8e-45 186.4 231 50.2
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 3.6e-45 186.0 258 46.5
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 3.6e-45 186.0 256 44.9
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 4.7e-45 185.7 273 48.0
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 6.2e-45 185.3 267 47.2
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 8.1e-45 184.9 247 48.2
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 1.1e-44 184.5 266 45.5
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 1.1e-44 184.5 264 46.6
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 1.1e-44 184.5 257 46.7
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 8.9e-44 181.4 263 46.8
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 8.9e-44 181.4 263 46.4
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 1.2e-43 181.0 281 47.7
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 1.2e-43 181.0 260 45.4
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 3.4e-43 179.5 238 49.2
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 7.6e-43 178.3 257 45.1
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 9.9e-43 177.9 291 43.3
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 1.7e-42 177.2 232 49.1
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 3.8e-42 176.0 268 45.1
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 3.8e-42 176.0 285 43.2
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 4.9e-42 175.6 277 43.7
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 6.4e-42 175.3 203 52.2
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 1.1e-41 174.5 245 46.1
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 3.2e-41 172.9 240 47.1
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 1.2e-40 171.0 210 50.5
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 1.2e-40 171.0 339 40.1
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 1.6e-40 170.6 268 44.4
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 4.6e-40 169.1 230 45.7
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 1.0e-39 167.9 268 44.8
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 2.3e-39 166.8 270 45.9
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 2.3e-39 166.8 270 45.9
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 8.7e-39 164.9 259 44.4
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 1.1e-38 164.5 250 44.4
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 1.5e-38 164.1 257 47.1
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 1.9e-38 163.7 163 57.7
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 3.3e-38 162.9 270 42.6
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 3.3e-38 162.9 177 53.1
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 4.3e-38 162.5 231 46.8
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 2.1e-37 160.2 259 43.2
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 2.8e-37 159.8 273 42.1
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 3.6e-37 159.5 259 41.7
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 6.2e-37 158.7 243 46.1
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 1.1e-36 157.9 211 48.3
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 1.8e-36 157.1 249 45.0
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 2.4e-36 156.8 259 41.7
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 4.0e-36 156.0 248 44.4
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 2.0e-35 153.7 158 55.1
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 2.9e-34 149.8 255 42.7
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 4.2e-33 146.0 88 80.7
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 1.2e-32 144.4 249 40.6
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 1.0e-31 141.4 221 43.9
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 3.3e-30 136.3 358 33.5
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 7.4e-30 135.2 258 38.4
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 1.3e-29 134.4 226 40.3
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 2.1e-29 133.7 157 51.0
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 6.2e-29 132.1 210 44.8
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 8.1e-29 131.7 108 64.8
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 4.5e-27 125.9 266 38.0
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 7.6e-27 125.2 197 43.7
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 2.9e-26 123.2 215 40.0
TPR.G3936 Trifolium pratense HOM05D005913 ORTHO05D007138 4.6e-24 115.9 70 80.0
BcaC07g42450 Brassica carinata HOM05D005913 ORTHO05D007138 6.0e-24 115.5 149 46.3
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea HOM05D005913 ORTHO05D007138 2.3e-23 113.6 71 78.9
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 6.2e-21 105.5 192 40.6
SEGI_13957 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 3.4e-19 99.8 84 63.1
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 2.5e-17 93.6 130 44.6
Atru.chr3.4202 Acer truncatum HOM05D005913 ORTHO05D007138 1.0e-15 88.2 54 75.9
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 1.5e-14 84.3 92 52.2
Solyc01g058530.4 Solanum lycopersicum HOM05D005913 ORTHO05D007138 1.5e-14 84.3 62 67.7
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 1.6e-13 80.9 117 41.0
CARHR102160 Cardamine hirsuta HOM05D005913 ORTHO05D007138 3.7e-13 79.7 97 51.5
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 1.1e-12 78.2 205 32.7
Sp7g33090 Schrenkiella parvula HOM05D005913 ORTHO05D007138 1.4e-12 77.8 134 45.5
CBR_g41534 Chara braunii HOM05D005913 ORTHO05D007138 2.2e-10 70.5 70 52.9
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 6.5e-10 68.9 180 32.2
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 6.1e-08 62.4 168 34.5


User provided reference genes

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