Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g05350 Schrenkiella parvula HOM05D004564 ORTHO05D006106 0.0e+00 1729.5 914 100.0
BcaB02g06779 Brassica carinata HOM05D004564 ORTHO05D006106 0.0e+00 1613.6 915 93.3
A10p05220 Brassica napus HOM05D004564 ORTHO05D006106 0.0e+00 1595.5 915 92.5
AL1G16620 Arabidopsis lyrata HOM05D004564 ORTHO05D006106 0.0e+00 1588.5 917 92.0
C05p04820 Brassica napus HOM05D004564 ORTHO05D006106 0.0e+00 1588.5 921 92.1
BraA10t42789Z Brassica rapa HOM05D004564 ORTHO05D006106 0.0e+00 1587.8 922 91.8
BolC5t29255H Brassica oleracea HOM05D004564 ORTHO05D006106 0.0e+00 1579.3 921 91.3
AT1G06590 Arabidopsis thaliana HOM05D004564 ORTHO05D006106 0.0e+00 1568.9 917 91.2
Carub.0001s0595 Capsella rubella HOM05D004564 ORTHO05D006106 0.0e+00 1545.0 915 90.3
A09p66910 Brassica napus HOM05D004564 ORTHO05D006106 0.0e+00 1524.6 915 89.2
Thhalv10006743m.g Eutrema salsugineum HOM05D004564 ORTHO05D006106 0.0e+00 1516.1 915 89.1
Aa31LG1G7670 Aethionema arabicum HOM05D004564 ORTHO05D006106 0.0e+00 1513.8 912 88.0
BraA09t42026Z Brassica rapa HOM05D004564 ORTHO05D006106 0.0e+00 1504.2 944 86.3
C08p51140 Brassica napus HOM05D004564 ORTHO05D006106 0.0e+00 1456.4 916 86.5
BolC8t52640H Brassica oleracea HOM05D004564 ORTHO05D006106 0.0e+00 1445.3 934 84.8
THA.LOC104800817 Tarenaya hassleriana HOM05D004564 ORTHO05D006106 0.0e+00 1370.9 916 79.9
CiPaw.04G137200 Carya illinoinensis HOM05D004564 ORTHO05D006106 0.0e+00 1175.6 912 67.2
Thecc.01G168400 Theobroma cacao HOM05D004564 ORTHO05D006106 0.0e+00 1164.8 915 68.9
Prupe.3G177800 Prunus persica HOM05D004564 ORTHO05D006106 0.0e+00 1164.4 919 68.2
CANSAT25G1027 Cannabis sativa HOM05D004564 ORTHO05D006106 0.0e+00 1159.4 914 67.3
CSS0004840 Camellia sinensis var. sinensis HOM05D004564 ORTHO05D006106 0.0e+00 1152.1 911 65.6
CsaV3_4G007910 Cucumis sativus L. HOM05D004564 ORTHO05D006106 0.0e+00 1148.7 917 64.9
MD09G1148300 Malus domestica HOM05D004564 ORTHO05D006106 0.0e+00 1148.7 915 67.7
TWI59G1136 Tripterygium wilfordii HOM05D004564 ORTHO05D006106 0.0e+00 1147.5 919 64.7
Gorai.007G175000 Gossypium raimondii HOM05D004564 ORTHO05D006106 0.0e+00 1144.4 915 67.4
Gohir.A11G157200 Gossypium hirsutum HOM05D004564 ORTHO05D006106 0.0e+00 1143.3 915 67.1
Phvul.008G194400 Phaseolus vulgaris HOM05D004564 ORTHO05D006106 0.0e+00 1141.3 915 66.6
QL08p045017 Quercus lobata HOM05D004564 ORTHO05D006106 0.0e+00 1140.6 986 61.9
Gohir.D11G164200 Gossypium hirsutum HOM05D004564 ORTHO05D006106 0.0e+00 1138.6 915 66.8
VMungo0647G1349 Vigna mungo HOM05D004564 ORTHO05D006106 0.0e+00 1137.9 913 66.2
arahy.Tifrunner.gnm1.ann1.THQ3DC Arachis hypogaea HOM05D004564 ORTHO05D006106 0.0e+00 1135.9 911 66.3
Ca_06263_v3 Cicer arietinum L. HOM05D004564 ORTHO05D006106 0.0e+00 1135.9 957 63.8
arahy.Tifrunner.gnm1.ann1.PNUX2Z Arachis hypogaea HOM05D004564 ORTHO05D006106 0.0e+00 1132.1 918 66.0
Glyma.14G030500 Glycine max HOM05D004564 ORTHO05D006106 0.0e+00 1128.2 913 66.3
Actinidia32511 Actinidia chinensis HOM05D004564 ORTHO05D006106 0.0e+00 1125.2 918 64.3
TAR369G0268 Trochodendron aralioides HOM05D004564 ORTHO05D006106 0.0e+00 1122.8 910 65.8
GSVIVG01020836001 Vitis vinifera HOM05D004564 ORTHO05D006106 0.0e+00 1120.1 915 64.7
Medtr5g091020 Medicago truncatula HOM05D004564 ORTHO05D006106 0.0e+00 1118.6 913 65.7
TPR.G10155 Trifolium pratense HOM05D004564 ORTHO05D006106 0.0e+00 1118.2 913 64.2
RcHm_v2.0_Chr2g0152251 Rosa chinensis HOM05D004564 ORTHO05D006106 0.0e+00 1113.6 915 64.2
Duzib133G1099 Durio zibethinus HOM05D004564 ORTHO05D006106 0.0e+00 1112.1 907 66.5
Cpa.g.sc119.28 Carica papaya HOM05D004564 ORTHO05D006106 0.0e+00 1102.8 919 64.1
Potri.004G081200 Populus trichocarpa HOM05D004564 ORTHO05D006106 0.0e+00 1100.9 903 63.6
LjContig00049g0003012 Lotus japonicus HOM05D004564 ORTHO05D006106 0.0e+00 1097.4 923 63.1
Cc05_g01430 Coffea canephora HOM05D004564 ORTHO05D006106 0.0e+00 1095.5 920 61.4
DCAR_016941 Daucus carota HOM05D004564 ORTHO05D006106 0.0e+00 1094.3 910 62.4
Manes.01G123700 Manihot esculenta HOM05D004564 ORTHO05D006106 0.0e+00 1094.0 909 63.5
FvH4_6g38720 Fragaria vesca HOM05D004564 ORTHO05D006106 0.0e+00 1093.2 915 62.8
FAN09G3866 Fragaria x ananassa HOM05D004564 ORTHO05D006106 0.0e+00 1087.0 929 62.1
Dinv03683 Davidia involucrata HOM05D004564 ORTHO05D006106 0.0e+00 1084.3 849 66.4
COL.COLO4_38399 Corchorus olitorius HOM05D004564 ORTHO05D006106 0.0e+00 1079.3 938 63.4
Sabra04G0053900 Salix brachista HOM05D004564 ORTHO05D006106 0.0e+00 1077.4 924 62.2
Migut.M00072 Erythranthe guttata HOM05D004564 ORTHO05D006106 6.3e-312 1074.3 907 63.0
Lj1g0025808 Lotus japonicus HOM05D004564 ORTHO05D006106 6.3e-312 1073.5 923 62.0
FAN14G4455 Fragaria x ananassa HOM05D004564 ORTHO05D006106 1.3e-311 1072.8 929 61.7
MSTRG.6616 Avicennia marina HOM05D004564 ORTHO05D006106 2.5e-311 1072.0 919 60.7
PGR042G1847 Punica granatum HOM05D004564 ORTHO05D006106 1.3e-310 1069.7 911 62.1
Sopen08g021130 Solanum pennellii HOM05D004564 ORTHO05D006106 1.1e-309 1066.6 911 60.6
SalBow7G3717 Salvia bowleyana HOM05D004564 ORTHO05D006106 8.3e-307 1057.0 919 59.4
Haze_13558 Corylus avellana HOM05D004564 ORTHO05D006106 1.5e-303 1046.2 1072 55.6
ClCG07G010420 Citrullus lanatus HOM05D004564 ORTHO05D006106 2.1e-302 1042.3 872 63.2
Solyc08g067190.4 Solanum lycopersicum HOM05D004564 ORTHO05D006106 1.4e-301 1039.6 958 57.6
PSO170G0418 Papaver somniferum HOM05D004564 ORTHO05D006106 2.4e-298 1028.9 901 59.8
PSO782G0424 Papaver somniferum HOM05D004564 ORTHO05D006106 6.0e-297 1024.2 901 59.7
Lsat_1_v5_gn_9_29980 Lactuca sativa HOM05D004564 ORTHO05D006106 3.3e-295 1018.5 915 60.0
CAN.G348.3 Capsicum annuum HOM05D004564 ORTHO05D006106 8.1e-294 1013.8 870 60.9
FAN05G0785 Fragaria x ananassa HOM05D004564 ORTHO05D006106 8.1e-294 1013.8 1082 52.9
HanXRQChr10g0292821 Helianthus annuus HOM05D004564 ORTHO05D006106 1.4e-293 1013.1 895 60.1
Nn7g37923 Nelumbo nucifera HOM05D004564 ORTHO05D006106 9.0e-293 1010.4 856 61.3
ECA247G1853 Erigeron canadensis HOM05D004564 ORTHO05D006106 2.0e-292 1009.2 909 59.5
SGA_v2.0_scaffold181G39711 Striga asiatica HOM05D004564 ORTHO05D006106 1.0e-288 996.9 986 57.0
EL10Ac1g01740 Beta vulgaris HOM05D004564 ORTHO05D006106 1.7e-283 979.5 916 56.6
CARHR006200 Cardamine hirsuta HOM05D004564 ORTHO05D006106 6.7e-280 967.6 589 89.6
Ciclev10030760m.g Citrus clementina HOM05D004564 ORTHO05D006106 1.7e-275 953.0 760 65.7
Sc06g0007580 Simmondsia chinensis HOM05D004564 ORTHO05D006106 3.8e-275 951.8 913 55.6
Aqoxy1G01488 Aquilegia oxysepala HOM05D004564 ORTHO05D006106 4.2e-274 948.3 922 58.1
Rhsim12G0010800 Rhododendron simsii HOM05D004564 ORTHO05D006106 1.5e-271 939.9 905 56.8
Nitab4.5_0004346g0010 Nicotiana tabacum HOM05D004564 ORTHO05D006106 2.4e-269 932.6 874 57.4
Cfa023356 Carpinus fangiana HOM05D004564 ORTHO05D006106 1.7e-267 926.4 921 56.5
Sed0025117 Sechium edule HOM05D004564 ORTHO05D006106 6.1e-265 917.9 759 63.0
AUR62022316 Chenopodium quinoa HOM05D004564 ORTHO05D006106 6.7e-264 914.4 916 53.7
AUR62034940 Chenopodium quinoa HOM05D004564 ORTHO05D006106 1.9e-263 912.9 856 56.4
Hund26665 Selenicereus undatus HOM05D004564 ORTHO05D006106 6.9e-261 904.4 1004 51.4
Nitab4.5_0000508g0020 Nicotiana tabacum HOM05D004564 ORTHO05D006106 5.9e-260 901.4 921 55.0
Ah.05g168440 Amaranthus hybridus HOM05D004564 ORTHO05D006106 9.7e-255 884.0 900 54.6
Oeu022916.1 Olea europaea HOM05D004564 ORTHO05D006106 9.7e-247 857.4 1141 44.8
Lj1A591G26 Lonicera japonica HOM05D004564 ORTHO05D006106 5.3e-245 851.7 705 64.4
unitig_37.g12587 Utricularia gibba HOM05D004564 ORTHO05D006106 1.2e-244 850.5 943 50.3
Eucgr.A02026 Eucalyptus grandis HOM05D004564 ORTHO05D006106 5.0e-243 845.1 721 65.3
Atru.chr6.2044 Acer truncatum HOM05D004564 ORTHO05D006106 4.7e-241 838.6 632 73.1
Os12g0626300 Oryza sativa ssp. japonica HOM05D004564 ORTHO05D006106 2.2e-235 819.7 929 50.2
Peaxi162Scf00922g00319 Petunia axillaris HOM05D004564 ORTHO05D006106 1.2e-231 807.4 776 55.9
SalBow1G3587 Salvia bowleyana HOM05D004564 ORTHO05D006106 3.4e-231 805.8 726 58.0
Zm00001eb128180 Zea mays HOM05D004564 ORTHO05D006106 7.2e-226 788.1 913 49.2
MELO3C016147.2 Cucumis melo HOM05D004564 ORTHO05D006106 2.1e-225 786.6 641 63.0
BcaNung07074 Brassica carinata HOM05D004564 ORTHO05D006106 2.4e-221 773.1 441 94.3
QL93p2016_0008 Quercus lobata HOM05D004564 ORTHO05D006106 2.2e-214 750.0 599 63.9
Lalb_Chr10g0106571 Lupinus albus HOM05D004564 ORTHO05D006106 5.8e-183 645.6 571 58.3
vmacro08736 Vaccinium macrocarpon HOM05D004564 ORTHO05D006106 1.6e-180 637.5 530 63.4
Psat2g017120 Pisum sativum HOM05D004564 ORTHO05D006106 1.6e-161 574.3 421 69.4
Psat2g017160 Pisum sativum HOM05D004564 ORTHO05D006106 1.4e-160 571.2 485 61.9
Pp3c3_33140 Physcomitrium patens HOM05D004564 ORTHO05D006106 6.7e-155 552.4 906 39.4
ATR0763G133 Amborella trichopoda HOM05D004564 ORTHO05D006106 1.9e-154 550.8 509 60.7
MBI18_g13604_MAGBIO Magnolia biondii HOM05D004564 ORTHO05D006106 2.3e-147 527.3 910 41.6
FAN02G2671 Fragaria x ananassa HOM05D004564 ORTHO05D006106 1.7e-134 484.6 465 57.6
Hma1.2p1_0539F.1_g174590 Hydrangea macrophylla HOM05D004564 ORTHO05D006106 6.7e-131 472.6 412 60.4
AagrBONN_evm.TU.Sc2ySwM_228.5505 Anthoceros agrestis HOM05D004564 ORTHO05D006106 4.8e-129 466.5 921 35.7
SMO174G0184 Selaginella moellendorffii HOM05D004564 ORTHO05D006106 3.1e-128 463.8 904 35.7
SHI30099 Sapria himalayana HOM05D004564 ORTHO05D006106 3.7e-121 440.3 605 44.0
Mapoly0007s0190 Marchantia polymorpha HOM05D004564 ORTHO05D006106 2.2e-118 431.0 909 33.6
Lalb_Chr10g0106581 Lupinus albus HOM05D004564 ORTHO05D006106 7.7e-111 406.0 293 74.4
vmacro08737 Vaccinium macrocarpon HOM05D004564 ORTHO05D006106 1.1e-109 402.1 634 40.5
arahy.Tifrunner.gnm1.ann1.UKG9X7 Arachis hypogaea HOM05D004564 ORTHO05D006106 4.3e-93 347.1 349 53.3
HPP92_001899 Vanilla planifolia HOM05D004564 ORTHO05D006106 1.6e-92 345.1 673 37.1
CBR_g44342 Chara braunii HOM05D000019 ORTHO05D000353 6.0e-87 326.6 566 38.3
GSVIVG01013077001 Vitis vinifera HOM05D004564 ORTHO05D006106 2.9e-81 307.8 234 72.2
CAN.G3149.1 Capsicum annuum HOM05D004564 ORTHO05D006106 9.5e-77 292.7 228 66.2
SEGI_14916 Sequoiadendron giganteum HOM05D004564 ORTHO05D006106 2.3e-75 288.1 277 55.6
MD17G1134700 Malus domestica HOM05D004564 ORTHO05D006106 2.1e-68 265.0 284 54.6
Glyma.02G284500 Glycine max HOM05D004564 ORTHO05D006106 1.2e-66 259.2 210 74.8
HPP92_001867 Vanilla planifolia HOM05D004564 ORTHO05D006106 2.2e-65 255.0 594 35.4
TAR626G0359 Trochodendron aralioides HOM05D004564 ORTHO05D006106 2.6e-58 231.5 151 73.5
BcaNung07000 Brassica carinata HOM05D004564 ORTHO05D006106 2.9e-49 201.4 118 89.0
MD17G1134600 Malus domestica HOM05D004564 ORTHO05D006106 1.0e-41 176.4 261 42.5
Peaxi162Scf00922g00318 Petunia axillaris HOM05D004564 ORTHO05D006106 2.5e-40 171.8 121 69.4
CDE02G3007 Ceratophyllum demersum HOM05D004564 ORTHO05D006106 1.6e-39 169.1 146 60.3
TAR626G0994 Trochodendron aralioides HOM05D004564 ORTHO05D006106 3.2e-32 144.8 98 75.5
SHI30097 Sapria himalayana HOM05D004564 ORTHO05D006106 3.0e-30 138.3 227 38.8
ATR0763G243 Amborella trichopoda HOM05D004564 ORTHO05D006106 1.1e-27 129.8 161 42.2
arahy.Tifrunner.gnm1.ann1.RHC2N4 Arachis hypogaea HOM05D000056 ORTHO05D006106 1.1e-21 109.8 157 38.9
Phvul.001G172501 Phaseolus vulgaris HOM05D004564 ORTHO05D006106 7.4e-21 107.1 131 42.0
Rhsim02G0232100 Rhododendron simsii HOM05D000252 ORTHO05D000307 4.1e-19 101.3 143 44.8
ATR0820G167 Amborella trichopoda HOM05D004564 ORTHO05D006106 7.7e-18 97.1 120 45.8
ATR0763G128 Amborella trichopoda HOM05D004564 ORTHO05D006106 2.9e-17 95.1 88 53.4
ATR0598G245 Amborella trichopoda HOM05D004564 ORTHO05D006106 3.8e-17 94.7 105 47.6
Lalb_Chr10g0106561 Lupinus albus HOM05D004564 ORTHO05D006106 4.7e-15 87.8 63 60.3
Rhsim12G0011200 Rhododendron simsii HOM05D004564 ORTHO05D000827 2.3e-14 85.5 100 53.0
Lj5g0002046 Lotus japonicus HOM05D004564 ORTHO05D000491 8.8e-14 83.6 180 33.3
TPR.G10922 Trifolium pratense HOM05D004564 ORTHO05D006106 3.3e-13 81.6 82 59.8
TPR.G35705 Trifolium pratense HOM05D023930 ORTHO05D018030 2.9e-09 68.6 130 40.0
TPR.G7402 Trifolium pratense HOM05D023930 ORTHO05D006106 3.8e-09 68.2 140 40.0
SEGI_30840 Sequoiadendron giganteum HOM05D004564 ORTHO05D006106 2.5e-08 65.5 113 33.6
Rhsim12G0011100 Rhododendron simsii HOM05D004564 ORTHO05D006106 5.5e-08 64.3 64 45.3
Rhsim12G0011500 Rhododendron simsii HOM05D004564 ORTHO05D006106 9.4e-08 63.5 81 38.3
Zm00001eb370760 Zea mays HOM05D004564 ORTHO05D006106 1.2e-07 63.2 65 49.2
SHI30098 Sapria himalayana HOM05D004564 ORTHO05D006106 6.1e-07 60.8 234 27.4
Rhsim12G0011600 Rhododendron simsii HOM05D004564 ORTHO05D000827 1.0e-06 60.1 75 53.3
MCO11G813 Micromonas commoda HOM05D004564 ORTHO05D006106 1.4e-06 59.7 995 20.0
Cre01.g034650 Chlamydomonas reinhardtii HOM05D004564 ORTHO05D006106 5.2e-06 57.8 103 35.0


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