Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g05300 Schrenkiella parvula HOM05D009265 ORTHO05D011682 1.0e-64 250.0 129 100.0
AL1G16570 Arabidopsis lyrata HOM05D009265 ORTHO05D011682 1.8e-53 212.6 127 86.6
Thhalv10009408m.g Eutrema salsugineum HOM05D009265 ORTHO05D011682 5.2e-53 211.1 129 87.6
Carub.0001s0591 Capsella rubella HOM05D009265 ORTHO05D011682 3.7e-51 204.9 127 82.7
AT1G06540 Arabidopsis thaliana HOM05D009265 ORTHO05D011682 6.3e-51 204.1 126 85.7
BraA10t42786Z Brassica rapa HOM05D009265 ORTHO05D011682 6.1e-38 161.0 128 70.3
A10p05190 Brassica napus HOM05D009265 ORTHO05D011682 4.0e-37 158.3 128 69.5
BolC5t29252H Brassica oleracea HOM05D009265 ORTHO05D011682 2.0e-36 156.0 128 68.8
BcaB02g06782 Brassica carinata HOM05D009265 ORTHO05D011682 1.6e-33 146.4 102 73.5
Aa31LG1G7640 Aethionema arabicum HOM05D009265 ORTHO05D011682 3.0e-29 132.1 146 54.1
BcaB06g28394 Brassica carinata HOM05D009265 ORTHO05D011682 4.9e-27 124.8 165 47.3
THA.LOC104826235 Tarenaya hassleriana HOM05D009265 ORTHO05D011682 8.3e-27 124.0 171 46.8
CARHR124430 Cardamine hirsuta HOM05D009265 ORTHO05D011682 1.8e-26 122.9 172 46.5
Thhalv10017317m.g Eutrema salsugineum HOM05D009265 ORTHO05D011682 1.8e-26 122.9 172 44.8
Carub.0004s1213 Capsella rubella HOM05D009265 ORTHO05D011682 2.0e-25 119.4 176 42.0
BcaB06g28461 Brassica carinata HOM05D009265 ORTHO05D011682 3.5e-25 118.6 172 41.9
A04p23620 Brassica napus HOM05D009265 ORTHO05D011682 3.5e-25 118.6 172 41.9
BolC4t27505H Brassica oleracea HOM05D009265 ORTHO05D011682 3.5e-25 118.6 172 41.9
BraA04t17888Z Brassica rapa HOM05D009265 ORTHO05D011682 3.5e-25 118.6 172 41.9
AL4G25870 Arabidopsis lyrata HOM05D009265 ORTHO05D011682 7.8e-25 117.5 157 44.6
Sp4g13400 Schrenkiella parvula HOM05D009265 ORTHO05D011682 1.0e-24 117.1 94 59.6
THA.LOC104800822 Tarenaya hassleriana HOM05D009265 ORTHO05D011682 1.3e-24 116.7 154 45.5
AT2G30930 Arabidopsis thaliana HOM05D009265 ORTHO05D011682 9.5e-23 110.5 163 43.6
BraA05t20402Z Brassica rapa HOM05D009265 ORTHO05D011682 9.5e-23 110.5 94 55.3
A05p14740 Brassica napus HOM05D009265 ORTHO05D011682 8.0e-22 107.5 94 55.3
BcaC02g11175 Brassica carinata HOM05D009265 ORTHO05D011682 2.3e-21 105.9 94 54.3
C04p19730 Brassica napus HOM05D009265 ORTHO05D011682 2.3e-21 105.9 94 54.3
BolC4t23506H Brassica oleracea HOM05D009265 ORTHO05D011682 2.3e-21 105.9 94 54.3
Aa31LG5G5990 Aethionema arabicum HOM05D009265 ORTHO05D011682 2.3e-13 79.3 147 38.8
C04p60020 Brassica napus HOM05D004710 ORTHO05D005445 3.4e-12 75.5 140 36.4
A04p23630 Brassica napus HOM05D009265 ORTHO05D033113 6.4e-11 71.2 99 49.5
C04p60080 Brassica napus HOM05D009265 ORTHO05D033113 1.9e-10 69.7 99 48.5
BolC4t27511H Brassica oleracea HOM05D009265 ORTHO05D033113 7.8e-09 64.3 60 56.7
BcaB02g10349 Brassica carinata HOM05D009265 ORTHO05D095729 2.3e-08 62.8 94 37.2


User provided reference genes

Program Settings