Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g05080 Schrenkiella parvula HOM05D007320 ORTHO05D009290 4.6e-165 584.7 344 100.0
Thhalv10008110m.g Eutrema salsugineum HOM05D007320 ORTHO05D009290 1.0e-156 557.0 344 95.1
AL1G16280 Arabidopsis lyrata HOM05D007320 ORTHO05D009290 8.9e-153 543.9 344 93.9
BcaB02g06809 Brassica carinata HOM05D007320 ORTHO05D009290 7.6e-152 540.8 344 93.6
AT1G06270 Arabidopsis thaliana HOM05D007320 ORTHO05D009290 9.9e-152 540.4 344 93.0
CARHR005830 Cardamine hirsuta HOM05D007320 ORTHO05D009290 1.7e-151 539.7 344 92.7
C05p04580 Brassica napus HOM05D007320 ORTHO05D009290 1.3e-148 530.0 345 92.5
Carub.0001s0564 Capsella rubella HOM05D007320 ORTHO05D009290 2.3e-148 529.3 344 91.0
BolC5t29229H Brassica oleracea HOM05D007320 ORTHO05D009290 4.3e-147 525.0 345 91.9
BcaC05g24288 Brassica carinata HOM05D007320 ORTHO05D009290 1.6e-146 523.1 345 91.6
A10p04990 Brassica napus HOM05D007320 ORTHO05D009290 1.4e-145 520.0 345 91.0
BraA10t42760Z Brassica rapa HOM05D007320 ORTHO05D009290 1.4e-145 520.0 345 91.0
Aa31LG1G7290 Aethionema arabicum HOM05D007320 ORTHO05D009290 4.2e-142 508.4 344 84.3
THA.LOC104800856 Tarenaya hassleriana HOM05D007320 ORTHO05D009290 1.3e-116 423.7 344 76.7
Ciclev10017507m.g Citrus clementina HOM05D007320 ORTHO05D009290 3.5e-96 355.9 336 57.1
Atru.chr6.2840 Acer truncatum HOM05D007320 ORTHO05D009290 6.1e-93 345.1 317 56.8
TWI59G0750 Tripterygium wilfordii HOM05D007320 ORTHO05D009290 5.7e-91 338.6 333 55.0
Lalb_Chr25g0279081 Lupinus albus HOM05D007320 ORTHO05D009290 1.3e-90 337.4 344 57.8
Cfa014690 Carpinus fangiana HOM05D007320 ORTHO05D009290 3.7e-90 335.9 337 62.6
Haze_13306 Corylus avellana HOM05D007320 ORTHO05D009290 1.4e-89 334.0 334 62.6
Lj3g0010689 Lotus japonicus HOM05D007320 ORTHO05D009290 1.8e-89 333.6 319 63.3
Dinv15897 Davidia involucrata HOM05D007320 ORTHO05D009290 2.4e-89 333.2 318 65.1
Prupe.3G125800 Prunus persica HOM05D007320 ORTHO05D009290 4.1e-89 332.4 318 67.0
Phvul.005G098950 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 1.6e-88 330.5 344 51.5
FAN10G1335 Fragaria x ananassa HOM05D007320 ORTHO05D009290 2.0e-88 330.1 323 61.6
FvH4_7g08410 Fragaria vesca HOM05D007320 ORTHO05D009290 2.7e-88 329.7 318 61.6
Medtr2g090885 Medicago truncatula HOM05D007320 ORTHO05D009290 2.7e-88 329.7 344 59.3
FAN03G0990 Fragaria x ananassa HOM05D007320 ORTHO05D009290 4.5e-88 328.9 316 61.4
FAN10G4046 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.0e-87 327.8 323 61.6
VMungo1080G0443 Vigna mungo HOM05D007320 ORTHO05D009290 1.3e-87 327.4 345 51.9
GSVIVG01020656001 Vitis vinifera HOM05D007320 ORTHO05D009290 1.3e-87 327.4 344 59.0
Manes.13G139600 Manihot esculenta HOM05D007320 ORTHO05D009290 1.7e-87 327.0 328 57.9
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 2.2e-87 326.6 344 50.3
CiPaw.04G130300 Carya illinoinensis HOM05D007320 ORTHO05D009290 3.8e-87 325.9 316 56.3
Actinidia11122 Actinidia chinensis HOM05D007320 ORTHO05D009290 6.5e-87 325.1 324 51.2
Rhsim06G0135200 Rhododendron simsii HOM05D007320 ORTHO05D009290 6.5e-87 325.1 332 60.2
Ca_01474_v3 Cicer arietinum L. HOM05D007320 ORTHO05D009290 1.9e-86 323.6 329 57.8
MD09G1241100 Malus domestica HOM05D007320 ORTHO05D009290 2.5e-86 323.2 317 63.4
Hma1.2p1_0002F.1_g002500 Hydrangea macrophylla HOM05D007320 ORTHO05D009290 8.0e-85 318.2 312 63.8
CANSAT64G2476 Cannabis sativa HOM05D007320 ORTHO05D009290 1.8e-84 317.0 320 63.1
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 4.0e-84 315.8 316 51.6
Cpa.g.sc209.6 Carica papaya HOM05D007320 ORTHO05D009290 5.2e-84 315.5 318 54.1
Gohir.D05G254900 Gossypium hirsutum HOM05D007320 ORTHO05D009290 5.2e-84 315.5 344 51.5
Gorai.009G266400 Gossypium raimondii HOM05D007320 ORTHO05D009290 5.2e-84 315.5 344 51.5
CSS0012636 Camellia sinensis var. sinensis HOM05D007320 ORTHO05D009290 6.8e-84 315.1 332 60.2
TAR627G0001 Trochodendron aralioides HOM05D007320 ORTHO05D009290 6.8e-84 315.1 326 63.5
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 8.8e-84 314.7 316 53.2
Gohir.A05G253000 Gossypium hirsutum HOM05D007320 ORTHO05D009290 8.8e-84 314.7 344 50.9
RcHm_v2.0_Chr0c20g0500221 Rosa chinensis HOM05D007320 ORTHO05D009290 8.8e-84 314.7 323 57.3
Sabra13G0103100 Salix brachista HOM05D007320 ORTHO05D009290 1.5e-83 313.9 321 64.2
vmacro12358 Vaccinium macrocarpon HOM05D007320 ORTHO05D009290 3.4e-83 312.8 319 58.3
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 9.8e-83 311.2 323 52.3
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 1.3e-82 310.8 330 51.5
Thecc.08G174300 Theobroma cacao HOM05D007320 ORTHO05D009290 1.3e-82 310.8 341 60.4
TPR.G6440 Trifolium pratense HOM05D007320 ORTHO05D009290 1.7e-82 310.5 316 63.6
Psat5g275040 Pisum sativum HOM05D007320 ORTHO05D009290 2.2e-82 310.1 326 60.4
Lj1P690T28 Lonicera japonica HOM05D007320 ORTHO05D009290 2.8e-82 309.7 342 58.5
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 8.3e-82 308.1 298 53.7
Dinv19981 Davidia involucrata HOM05D007320 ORTHO05D009290 1.8e-81 307.0 299 65.9
MSTRG.20317 Avicennia marina HOM05D007320 ORTHO05D009290 5.4e-81 305.4 320 50.3
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 1.2e-80 304.3 330 50.6
Potri.013G124100 Populus trichocarpa HOM05D007320 ORTHO05D009290 1.0e-79 301.2 321 62.6
COL.COLO4_26851 Corchorus olitorius HOM05D007320 ORTHO05D009290 1.7e-79 300.4 344 54.7
Sed0016711 Sechium edule HOM05D007320 ORTHO05D009290 2.2e-79 300.1 333 57.4
Sc07g0005270 Simmondsia chinensis HOM05D007320 ORTHO05D009290 8.5e-79 298.1 324 61.1
ClCG02G009070 Citrullus lanatus HOM05D007320 ORTHO05D009290 1.5e-78 297.4 316 50.6
Eucgr.F01954 Eucalyptus grandis HOM05D007320 ORTHO05D009290 1.9e-78 297.0 319 61.4
Oeu000571.1 Olea europaea HOM05D007320 ORTHO05D009290 1.9e-78 297.0 318 55.7
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 3.2e-78 296.2 333 49.8
Nn3g20750 Nelumbo nucifera HOM05D007320 ORTHO05D009290 9.4e-78 294.7 330 50.9
Cc05_g07980 Coffea canephora HOM05D007320 ORTHO05D009290 2.7e-77 293.1 323 48.6
CsaV3_2G004500 Cucumis sativus L. HOM05D007320 ORTHO05D009290 2.3e-76 290.0 318 49.1
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 3.0e-76 289.7 349 48.4
AUR62035379 Chenopodium quinoa HOM05D007320 ORTHO05D009290 4.0e-76 289.3 315 59.0
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 8.8e-76 288.1 346 45.7
EL10Ac2g02568 Beta vulgaris HOM05D007320 ORTHO05D009290 1.3e-74 284.3 320 57.5
Migut.L01118 Erythranthe guttata HOM05D007320 ORTHO05D009290 1.6e-72 277.3 341 46.9
SGA_v2.0_scaffold313G48283 Striga asiatica HOM05D007320 ORTHO05D009290 2.0e-72 276.9 346 44.2
DCAR_013053 Daucus carota HOM05D007320 ORTHO05D009290 3.5e-72 276.2 312 57.7
SalBow8G4737 Salvia bowleyana HOM05D007320 ORTHO05D009290 2.8e-69 266.5 343 42.9
Migut.C00284 Erythranthe guttata HOM05D007320 ORTHO05D009290 3.6e-69 266.2 332 45.2
MBI06_g25716_MAGBIO Magnolia biondii HOM05D007320 ORTHO05D009290 6.1e-69 265.4 320 48.8
Lsat_1_v5_gn_4_28301 Lactuca sativa HOM05D007320 ORTHO05D009290 8.0e-69 265.0 320 47.2
SalBow8G5340 Salvia bowleyana HOM05D007320 ORTHO05D009290 1.4e-68 264.2 343 42.0
Migut.D01592 Erythranthe guttata HOM05D007320 ORTHO05D009290 1.5e-67 260.8 335 44.8
PGR083G2305 Punica granatum HOM05D007320 ORTHO05D009290 1.3e-66 257.7 318 57.9
SHI10502 Sapria himalayana HOM05D007320 ORTHO05D009290 5.6e-62 242.3 317 51.7
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 9.5e-62 241.5 343 41.7
TPR.G5736 Trifolium pratense HOM05D007320 ORTHO05D009290 1.2e-59 234.6 303 44.9
unitig_62.g23164 Utricularia gibba HOM05D007320 ORTHO05D009290 1.5e-59 234.2 344 39.2
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 2.4e-57 226.9 230 66.1
Phvul.005G098533 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 1.1e-49 201.4 185 56.8
TPR.G34643 Trifolium pratense HOM05D007320 ORTHO05D009290 2.7e-48 196.8 166 58.4
MELO3C004341.2 Cucumis melo HOM05D007320 ORTHO05D009290 1.9e-41 174.1 168 51.2
Cpa.g.sc209.4 Carica papaya HOM05D007320 ORTHO05D009290 6.4e-34 149.1 154 53.2
arahy.Tifrunner.gnm1.ann1.CSM94Q Arachis hypogaea HOM05D007320 ORTHO05D009290 1.9e-33 147.5 112 62.5
arahy.Tifrunner.gnm1.ann1.66V1NK Arachis hypogaea HOM05D007320 ORTHO05D009290 2.3e-31 140.6 100 66.0
PGSC0003DMG401001710 Solanum tuberosum HOM05D007320 ORTHO05D009290 1.5e-27 127.9 108 61.1
Sc21g0003340 Simmondsia chinensis HOM05D007320 ORTHO05D009290 3.4e-27 126.7 98 61.2
Sc21g0003330 Simmondsia chinensis HOM05D007320 ORTHO05D009290 7.1e-25 119.0 173 41.0
Dinv15900 Davidia involucrata HOM05D007320 ORTHO05D009290 9.6e-22 108.6 183 55.2
SalBow7G0970 Salvia bowleyana HOM05D000555 ORTHO05D000646 5.1e-15 86.3 95 44.2
arahy.Tifrunner.gnm1.ann1.5PR57S Arachis hypogaea HOM05D007320 ORTHO05D009290 8.7e-15 85.5 115 45.2
MELO3C021360.2 Cucumis melo HOM05D007320 ORTHO05D009290 2.7e-08 63.9 109 40.4
Peaxi162Scf00102g01049 Petunia axillaris HOM05D007320 ORTHO05D009290 7.4e-06 55.8 66 45.5


User provided reference genes

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