Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g04320 Schrenkiella parvula HOM05D000896 ORTHO05D000594 1.0e-154 550.1 281 100.0
BcaC05g24385 Brassica carinata HOM05D000896 ORTHO05D000594 3.4e-33 146.4 225 47.6
C05p03790 Brassica napus HOM05D000896 ORTHO05D000594 3.4e-33 146.4 225 47.6
BolC5t29156H Brassica oleracea HOM05D000896 ORTHO05D000594 3.4e-33 146.4 225 47.6
BcaB02g06859 Brassica carinata HOM05D000896 ORTHO05D000594 2.1e-30 137.1 223 46.2
BraA10t42685Z Brassica rapa HOM05D000896 ORTHO05D000594 1.5e-28 131.0 214 44.9
A10p04160 Brassica napus HOM05D000896 ORTHO05D000594 1.7e-24 117.5 214 42.1
AL3G40610 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 7.1e-15 85.5 252 34.1
CARHR217360 Cardamine hirsuta HOM05D000896 ORTHO05D000594 7.1e-15 85.5 87 51.7
AL7G25460 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 1.3e-13 81.3 179 41.3
BraA09t37387Z Brassica rapa HOM05D000896 ORTHO05D000594 1.3e-13 81.3 181 37.0
AL3G40940 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 2.3e-13 80.5 249 33.3
Carub.0003s2555 Capsella rubella HOM05D000896 ORTHO05D000594 6.7e-13 79.0 120 43.3
AL3G40220 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 8.7e-13 78.6 248 32.7
A09p17570 Brassica napus HOM05D000896 ORTHO05D000594 3.3e-12 76.6 181 35.4
AL7G52080 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 4.3e-12 76.3 264 31.8
BcaC05g27223 Brassica carinata HOM05D000896 ORTHO05D000594 4.3e-12 76.3 186 31.7
C05p31330 Brassica napus HOM05D000896 ORTHO05D000594 4.3e-12 76.3 186 31.7
Carub.0001s0530 Capsella rubella HOM05D000896 ORTHO05D000594 1.3e-11 74.7 85 49.4
Thhalv10029259m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 1.3e-11 74.7 73 50.7
AL26U10040 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 1.6e-11 74.3 164 37.2
BcaB07g31212 Brassica carinata HOM05D000896 ORTHO05D000594 2.1e-11 73.9 190 35.3
BcaB07g32861 Brassica carinata HOM05D000896 ORTHO05D000594 2.8e-11 73.6 183 37.2
BolC5t31856H Brassica oleracea HOM05D000896 ORTHO05D000594 2.8e-11 73.6 186 31.2
Carub.0007s1353 Capsella rubella HOM05D000896 ORTHO05D000594 2.8e-11 73.6 201 34.3
CARHR291820 Cardamine hirsuta HOM05D000896 ORTHO05D000594 2.8e-11 73.6 83 50.6
Thhalv10029471m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 2.8e-11 73.6 126 39.7
AT3G24850 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 8.1e-11 72.0 136 36.8
AT5G38490 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 1.1e-10 71.6 239 29.7
AT3G49610 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 2.4e-10 70.5 71 52.1
BcaC04g22224 Brassica carinata HOM05D000896 ORTHO05D000594 3.1e-10 70.1 181 34.3
Thhalv10029136m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 1.2e-09 68.2 241 32.8
AT5G38500 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 1.5e-09 67.8 181 33.7
A09p34210 Brassica napus HOM05D000896 ORTHO05D000594 1.5e-09 67.8 180 33.3
BraA09t38969Z Brassica rapa HOM05D000896 ORTHO05D000594 1.5e-09 67.8 180 33.3
AT5G24050 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 7.6e-09 65.5 229 31.9
Carub.0007s3741 Capsella rubella HOM05D000896 ORTHO05D000594 9.9e-09 65.1 138 39.9
AL1G15890 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 1.3e-08 64.7 152 37.5
AL1G46070 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 2.2e-08 63.9 165 33.9
C09p21870 Brassica napus HOM05D000896 ORTHO05D000594 6.4e-08 62.4 188 31.9
BolC9t55092H Brassica oleracea HOM05D000896 ORTHO05D000594 6.4e-08 62.4 254 29.5
CARHR101530 Cardamine hirsuta HOM05D000896 ORTHO05D000594 6.4e-08 62.4 130 37.7
AT1G32030 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 8.4e-08 62.0 171 34.5
AL5G29460 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 1.4e-07 61.2 142 37.3
Thhalv10022269m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 1.9e-07 60.8 70 41.4
SpUn1102_0010 Schrenkiella parvula HOM05D000896 ORTHO05D000594 1.9e-07 60.8 168 31.5
BolC1t01330H Brassica oleracea HOM05D000896 ORTHO05D000594 3.2e-07 60.1 171 33.9
THA.LOC104827678 Tarenaya hassleriana HOM05D000896 ORTHO05D000594 3.2e-07 60.1 81 43.2
Sp6g07490 Schrenkiella parvula HOM05D000896 ORTHO05D000594 5.5e-07 59.3 72 41.7
AL7G52070 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 7.1e-07 58.9 139 36.0
THA.LOC104824133 Tarenaya hassleriana HOM05D000896 ORTHO05D000594 9.3e-07 58.5 81 42.0
Carub.0322s0001 Capsella rubella HOM05D000896 ORTHO05D000594 1.2e-06 58.2 68 47.1
Thhalv10009508m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 1.2e-06 58.2 83 41.0
CARHR005450 Cardamine hirsuta HOM05D000896 ORTHO05D000594 2.1e-06 57.4 233 31.3
Thhalv10009348m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 2.7e-06 57.0 70 41.4


User provided reference genes

Program Settings