Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g04210 Schrenkiella parvula HOM05D002385 ORTHO05D002245 8.8e-34 146.4 73 100.0
BraA10t42676Z Brassica rapa HOM05D002385 ORTHO05D002245 2.0e-25 118.6 73 79.5
A10p04050 Brassica napus HOM05D002385 ORTHO05D002245 2.6e-25 118.2 73 82.2
BolC5t29144H Brassica oleracea HOM05D002385 ORTHO05D002245 7.5e-25 116.7 73 78.1
Thhalv10009262m.g Eutrema salsugineum HOM05D002385 ORTHO05D002245 9.8e-25 116.3 74 79.7
C05p03670 Brassica napus HOM05D002385 ORTHO05D002245 2.8e-24 114.8 73 76.7
CARHR004830 Cardamine hirsuta HOM05D002385 ORTHO05D002245 8.3e-24 113.2 73 76.7
Carub.0001s0465 Capsella rubella HOM05D002385 ORTHO05D002245 1.2e-22 109.4 73 72.6
AT1G05340 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 1.6e-22 109.0 73 76.7
AL1G15140 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 1.7e-21 105.5 73 75.3
AL4G27550 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 4.0e-18 94.4 74 63.5
AT2G32210 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 6.8e-18 93.6 74 63.5
BcaB02g10483 Brassica carinata HOM05D002385 ORTHO05D002245 6.8e-18 93.6 74 63.5
A05p12990 Brassica napus HOM05D002385 ORTHO05D002245 6.8e-18 93.6 74 63.5
BraA05t20239Z Brassica rapa HOM05D002385 ORTHO05D002245 6.8e-18 93.6 74 63.5
Aa31LG5G4320 Aethionema arabicum HOM05D002385 ORTHO05D002245 8.9e-18 93.2 75 60.0
Carub.0004s1351 Capsella rubella HOM05D002385 ORTHO05D002245 1.2e-17 92.8 75 62.7
Sp4g14580 Schrenkiella parvula HOM05D002385 ORTHO05D002245 1.2e-17 92.8 74 64.9
Sp4g14570 Schrenkiella parvula HOM05D002385 ORTHO05D002245 1.5e-17 92.4 74 63.5
BcaC02g11342 Brassica carinata HOM05D002385 ORTHO05D002245 2.6e-17 91.7 74 62.2
C04p17420 Brassica napus HOM05D002385 ORTHO05D002245 2.6e-17 91.7 74 62.2
CARHR125980 Cardamine hirsuta HOM05D002385 ORTHO05D002245 5.7e-17 90.5 76 61.8
BraA04t17993Z Brassica rapa HOM05D002385 ORTHO05D002245 4.9e-16 87.4 74 60.8
THA.LOC109116124 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 1.1e-15 86.3 74 55.4
BcaC02g07945 Brassica carinata HOM05D002385 ORTHO05D002245 1.4e-15 85.9 74 59.5
BcaB06g28585 Brassica carinata HOM05D002385 ORTHO05D002245 5.4e-15 84.0 74 58.1
AL4G27570 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 1.2e-14 82.8 77 59.7
C04p61680 Brassica napus HOM05D002385 ORTHO05D002245 1.6e-14 82.4 74 56.8
THA.LOC104826161 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 5.9e-14 80.5 74 56.8
AT2G32200 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 1.1e-12 76.3 75 54.7
Dinv19617 Davidia involucrata HOM05D002385 ORTHO05D002245 2.8e-11 71.6 71 50.7
Aa31LG1G19350 Aethionema arabicum HOM05D002385 ORTHO05D002245 6.1e-11 70.5 57 59.6
Carub.0004s1352 Capsella rubella HOM05D002385 ORTHO05D002245 6.1e-11 70.5 76 51.3
AL4G27560 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 1.4e-10 69.3 75 50.7
AT2G32190 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 1.4e-10 69.3 60 60.0
TWI60G1403 Tripterygium wilfordii HOM05D002385 ORTHO05D002245 1.5e-09 65.9 75 50.7
Oeu056976.2 Olea europaea HOM05D002385 ORTHO05D002245 3.4e-09 64.7 84 44.0
C05p41120 Brassica napus HOM05D002385 ORTHO05D002245 5.8e-09 63.9 66 51.5
BolC5t32855H Brassica oleracea HOM05D002385 ORTHO05D002245 5.8e-09 63.9 66 51.5
Migut.M01554 Erythranthe guttata HOM05D002385 ORTHO05D002245 7.5e-09 63.5 85 48.2
Atru.chr11.2673 Acer truncatum HOM05D002385 ORTHO05D002245 9.8e-09 63.2 78 47.4
CANSAT64G2629 Cannabis sativa HOM05D002385 ORTHO05D002245 6.4e-08 60.5 74 45.9
Potri.016G019201 Populus trichocarpa HOM05D002385 ORTHO05D002245 6.4e-08 60.5 72 47.2
A04p24750 Brassica napus HOM05D002385 ORTHO05D002245 1.4e-07 59.3 58 55.2
Glyma.08G171400 Glycine max HOM05D002385 ORTHO05D002245 1.4e-07 59.3 77 44.2
GSVIVG01015779001 Vitis vinifera HOM05D002385 ORTHO05D002245 1.4e-07 59.3 76 42.1
THA.LOC104822278 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 2.4e-07 58.5 59 54.2
HanXRQChr01g0017681 Helianthus annuus HOM05D002385 ORTHO05D002245 5.4e-07 57.4 63 49.2
Atru.chr8.975 Acer truncatum HOM05D002385 ORTHO05D002245 2.0e-06 55.5 82 45.1
Atru.chr8.976 Acer truncatum HOM05D002385 ORTHO05D002245 2.0e-06 55.5 82 45.1
Duzib235G0963 Durio zibethinus HOM05D014462 ORTHO05D002245 2.0e-06 55.5 96 36.5
Thecc.07G152000 Theobroma cacao HOM05D021429 ORTHO05D022417 2.7e-06 55.1 59 45.8
BcaC09g49159 Brassica carinata HOM05D002385 ORTHO05D002245 4.6e-06 54.3 73 46.6
ECA240G4719 Erigeron canadensis HOM05D002385 ORTHO05D002245 4.6e-06 54.3 73 41.1
FAN14G0168 Fragaria x ananassa HOM05D002385 ORTHO05D002245 6.0e-06 53.9 68 44.1


User provided reference genes

Program Settings