Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 4.9e-257 890.6 435 100.0
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 5.2e-206 721.1 399 88.5
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 2.2e-201 705.7 399 88.7
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 3.8e-201 704.9 399 88.5
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 1.9e-200 702.6 399 87.5
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 2.4e-195 685.6 399 84.0
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 2.7e-194 682.2 400 86.2
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 4.5e-194 681.4 400 86.0
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 4.5e-194 681.4 400 86.0
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 1.1e-192 676.8 402 85.8
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 1.7e-188 662.9 399 83.7
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 3.3e-176 622.1 400 77.5
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 2.8e-159 565.8 374 72.5
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 3.6e-159 565.5 376 73.7
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 6.8e-158 561.2 410 68.5
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 5.8e-157 558.1 415 65.8
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 1.7e-156 556.6 382 70.7
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 2.2e-156 556.2 346 74.0
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 6.4e-156 554.7 337 77.4
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 6.4e-156 554.7 385 69.9
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 4.2e-155 552.0 373 72.7
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 9.2e-155 550.8 342 75.4
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 1.3e-153 547.0 352 74.1
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 8.7e-153 544.3 397 67.5
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 1.5e-152 543.5 400 66.8
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 3.3e-152 542.3 372 71.5
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 4.3e-152 542.0 350 71.7
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 5.6e-152 541.6 377 68.2
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 5.6e-152 541.6 404 66.3
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 1.6e-151 540.0 379 69.4
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 3.6e-151 538.9 345 71.9
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 3.6e-151 538.9 379 68.3
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 4.8e-151 538.5 345 73.9
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 6.2e-151 538.1 383 70.5
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 6.2e-151 538.1 360 69.4
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 1.4e-150 537.0 385 67.8
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 1.4e-150 537.0 385 67.8
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 2.4e-150 536.2 380 69.5
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 3.1e-150 535.8 352 71.3
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 3.1e-150 535.8 345 73.6
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 4.0e-150 535.4 349 71.6
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 1.5e-149 533.5 382 66.5
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 2.0e-149 533.1 346 72.5
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 7.6e-149 531.2 380 67.6
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 2.4e-147 526.2 410 63.7
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 3.2e-147 525.8 393 68.2
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 4.2e-147 525.4 388 68.0
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 4.2e-147 525.4 376 70.2
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 4.2e-147 525.4 345 72.2
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 5.4e-147 525.0 411 63.0
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 5.4e-147 525.0 401 65.6
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 7.1e-147 524.6 345 73.3
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 9.3e-147 524.2 358 71.8
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 2.7e-146 522.7 384 65.6
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 3.5e-146 522.3 408 64.5
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 4.6e-146 521.9 402 66.7
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 6.0e-146 521.5 373 69.2
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 2.3e-145 519.6 373 69.2
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 3.9e-145 518.8 346 70.5
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 1.5e-144 516.9 345 72.2
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 5.6e-144 515.0 383 65.5
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 7.3e-144 514.6 405 65.4
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 6.9e-142 508.1 400 64.0
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 9.0e-142 507.7 345 70.1
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 6.0e-138 495.0 353 68.3
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 5.1e-137 491.9 346 67.6
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 4.5e-133 478.8 336 68.8
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 1.3e-132 477.2 347 65.1
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 2.2e-132 476.5 350 67.7
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 8.4e-132 474.6 363 62.5
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.1e-131 474.2 346 67.9
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 1.9e-131 473.4 287 78.0
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 2.7e-130 469.5 333 68.8
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 4.6e-130 468.8 357 65.3
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 5.1e-129 465.3 475 53.3
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 6.7e-129 464.9 291 75.3
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 2.1e-127 459.9 395 61.0
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 6.2e-127 458.4 318 71.4
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 5.3e-126 455.3 498 51.4
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 2.2e-124 449.9 298 72.5
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 5.1e-121 438.7 346 65.3
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 9.7e-120 434.5 380 60.5
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 5.9e-109 398.7 330 60.9
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 5.9e-109 398.7 283 67.1
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 7.0e-102 375.2 246 72.4
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 6.7e-97 358.6 353 49.9
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 8.2e-95 351.7 334 52.7
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 1.4e-94 350.9 332 50.6
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 1.7e-92 344.0 336 51.5
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 1.7e-84 317.4 214 69.2
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 1.2e-82 311.2 210 71.9
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 1.9e-67 260.8 237 55.7
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 7.8e-61 238.8 148 75.0
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 5.6e-59 232.6 159 69.8
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.3e-55 221.5 167 66.5
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 1.1e-54 218.4 354 37.0
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 7.8e-53 212.2 158 62.7
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 1.0e-52 211.8 349 37.8
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 8.6e-44 182.2 415 30.4
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 3.6e-42 176.8 179 46.9
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 8.1e-42 175.6 147 61.2
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 1.6e-34 151.4 386 32.6
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 3.6e-34 150.2 89 73.0
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 1.8e-33 147.9 127 57.5
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 4.4e-32 143.3 113 63.7
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 3.2e-30 137.1 114 58.8
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 9.9e-24 115.5 72 69.4
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 2.9e-23 114.0 114 51.8
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 5.6e-19 99.8 78 64.1
unitig_744.g24023 Utricularia gibba HOM05D000595 ORTHO05D008454 4.8e-18 96.7 65 70.8
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 3.2e-14 84.0 72 55.6
SEGI_41312 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 3.2e-14 84.0 56 64.3
SEGI_06009 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 1.5e-08 65.1 63 47.6
Aqoxy3G00773 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 1.3e-07 62.0 53 52.8
Actinidia33192 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.1e-06 58.9 35 77.1


User provided reference genes

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