Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 1.1e-225 786.2 381 100.0
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 8.0e-203 710.3 384 90.4
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 1.9e-196 689.1 382 88.0
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 6.1e-195 684.1 382 87.2
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 6.1e-195 684.1 389 86.6
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 6.1e-195 684.1 389 86.6
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 3.0e-194 681.8 389 86.4
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 8.9e-194 680.2 382 87.4
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 1.7e-192 676.0 388 85.8
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 3.7e-192 674.9 388 85.8
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 1.0e-189 666.8 382 84.8
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 5.4e-183 644.4 387 81.9
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 2.5e-180 635.6 351 86.9
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 8.1e-171 604.0 382 77.7
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 4.0e-146 521.9 359 71.3
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 2.5e-140 502.7 378 64.3
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 9.6e-140 500.7 363 67.8
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 1.3e-139 500.4 364 66.2
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 8.1e-139 497.7 381 63.5
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 8.1e-139 497.7 347 68.0
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 1.4e-138 496.9 389 63.5
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 3.1e-138 495.7 335 68.7
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 3.1e-138 495.7 381 63.3
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 5.3e-138 495.0 381 63.0
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 1.5e-137 493.4 342 68.4
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 2.6e-137 492.7 378 64.3
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 2.6e-137 492.7 338 69.8
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.7e-136 490.0 380 63.4
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 3.8e-136 488.8 369 65.6
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 6.4e-136 488.0 359 66.6
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 1.1e-135 487.3 378 63.2
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 1.4e-135 486.9 383 63.7
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 3.2e-135 485.7 370 64.6
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 2.1e-134 483.0 358 66.2
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 4.6e-134 481.9 374 63.4
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 1.0e-133 480.7 330 70.0
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 3.0e-133 479.2 354 66.4
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 5.1e-133 478.4 331 68.9
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 1.5e-132 476.9 337 68.8
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 3.3e-132 475.7 364 63.7
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 7.4e-132 474.6 381 62.7
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 2.1e-131 473.0 373 61.9
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 1.4e-130 470.3 347 66.0
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 2.4e-130 469.5 334 67.1
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 6.9e-130 468.0 348 65.2
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 3.4e-129 465.7 334 67.4
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 1.0e-128 464.2 412 58.7
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 1.0e-128 464.2 330 66.4
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 1.0e-128 464.2 394 58.6
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 2.2e-128 463.0 373 61.1
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 2.9e-128 462.6 369 61.0
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 3.8e-128 462.2 382 62.3
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 3.5e-126 455.7 388 59.0
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 6.0e-126 454.9 349 63.0
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 6.7e-125 451.4 390 59.2
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 1.1e-124 450.7 333 64.9
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 1.5e-124 450.3 391 57.0
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 7.4e-124 448.0 327 65.7
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 9.7e-124 447.6 333 65.5
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 2.2e-123 446.4 373 58.7
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 8.2e-123 444.5 352 61.6
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 4.1e-122 442.2 344 61.3
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 5.3e-122 441.8 345 60.6
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 2.0e-121 439.9 329 62.3
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 5.9e-121 438.3 333 64.0
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 1.7e-120 436.8 358 58.9
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 3.8e-120 435.6 341 62.5
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 3.8e-120 435.6 399 55.1
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 8.5e-120 434.5 377 57.0
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 4.2e-119 432.2 357 59.4
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 2.1e-118 429.9 331 61.9
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 3.9e-117 425.6 328 61.0
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 2.0e-113 413.3 339 58.1
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 3.4e-113 412.5 367 55.3
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 5.9e-113 411.8 334 58.1
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 1.0e-109 401.0 377 55.4
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 1.5e-108 397.1 378 52.1
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 6.3e-107 391.7 349 56.7
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 1.8e-106 390.2 370 54.6
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 1.2e-105 387.5 293 64.5
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 4.5e-105 385.6 312 60.9
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 1.3e-104 384.0 339 57.8
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 1.7e-104 383.6 273 65.2
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 2.2e-104 383.3 367 54.2
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 3.0e-101 372.9 491 43.4
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 3.0e-101 372.9 373 54.7
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 3.3e-100 369.4 369 53.1
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 1.5e-95 354.0 242 67.4
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 3.6e-94 349.4 275 61.1
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 4.7e-94 349.0 319 55.5
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 6.8e-93 345.1 281 57.3
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 1.8e-90 337.0 264 61.0
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 1.5e-87 327.4 310 51.0
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 1.0e-85 321.2 251 60.6
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 9.1e-82 308.1 319 45.5
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 6.1e-78 295.4 336 47.9
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 8.9e-77 291.6 398 43.0
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 2.0e-76 290.4 238 56.7
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 5.0e-72 275.8 167 72.5
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 3.6e-70 269.6 174 67.2
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 2.6e-68 263.5 326 43.3
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 5.2e-61 239.2 351 38.7
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 1.1e-37 161.8 102 77.5
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 3.1e-37 160.2 146 52.7
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 8.4e-27 125.6 78 71.8
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 1.1e-26 125.2 98 62.2
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.2e-17 95.1 75 64.0
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 6.7e-16 89.4 97 46.4
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 5.5e-10 69.7 47 61.7
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 7.2e-10 69.3 59 59.3
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.3e-08 65.1 39 69.2
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 1.1e-07 62.0 51 51.0
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 4.3e-07 60.1 55 52.7


User provided reference genes

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