Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g02550 Schrenkiella parvula HOM05D007014 ORTHO05D008894 4.8e-85 317.8 159 100.0
BcaC07g42241 Brassica carinata HOM05D007014 ORTHO05D008894 2.6e-78 295.4 159 91.8
Carub.0001s0276 Capsella rubella HOM05D007014 ORTHO05D008894 8.2e-77 290.4 159 89.3
AT1G03650 Arabidopsis thaliana HOM05D007014 ORTHO05D008894 5.9e-75 284.3 159 87.4
BcaC07g42236 Brassica carinata HOM05D007014 ORTHO05D008894 5.9e-75 284.3 159 87.4
Thhalv10008981m.g Eutrema salsugineum HOM05D007014 ORTHO05D008894 5.9e-75 284.3 159 91.2
BcaC07g42250 Brassica carinata HOM05D007014 ORTHO05D008894 1.3e-74 283.1 163 86.5
C08p52830 Brassica napus HOM05D007014 ORTHO05D008894 1.3e-74 283.1 163 86.5
BolC8t52799H Brassica oleracea HOM05D007014 ORTHO05D008894 8.5e-74 280.4 160 88.1
BraA09t42163Z Brassica rapa HOM05D007014 ORTHO05D008894 1.1e-73 280.0 160 86.9
AL1G13150 Arabidopsis lyrata HOM05D007014 ORTHO05D008894 7.2e-73 277.3 159 87.4
BcaC07g42259 Brassica carinata HOM05D007014 ORTHO05D008894 1.2e-72 276.6 163 85.9
CARHR002980 Cardamine hirsuta HOM05D007014 ORTHO05D008894 2.1e-72 275.8 155 87.1
Aa31LG1G20970 Aethionema arabicum HOM05D007014 ORTHO05D008894 2.3e-71 272.3 157 83.4
THA.LOC104801176 Tarenaya hassleriana HOM05D007014 ORTHO05D008894 8.0e-64 247.3 158 77.2
Hma1.2p1_1201F.1_g266700 Hydrangea macrophylla HOM05D007014 ORTHO05D008894 2.3e-63 245.7 151 75.5
Cfa014594 Carpinus fangiana HOM05D007014 ORTHO05D008894 3.4e-62 241.9 155 72.9
Haze_13147 Corylus avellana HOM05D007014 ORTHO05D008894 1.3e-61 240.0 155 71.6
MELO3C024591.2 Cucumis melo HOM05D007014 ORTHO05D008894 3.7e-61 238.4 149 74.5
ClCG02G017580 Citrullus lanatus HOM05D007014 ORTHO05D008894 3.1e-60 235.3 149 73.2
Nn1g06593 Nelumbo nucifera HOM05D007014 ORTHO05D008894 5.4e-60 234.6 148 74.3
Thecc.02G177900 Theobroma cacao HOM05D007014 ORTHO05D008894 7.0e-60 234.2 152 77.0
QL08p038417 Quercus lobata HOM05D007014 ORTHO05D008894 1.2e-59 233.4 151 70.9
GSVIVG01030373001 Vitis vinifera HOM05D007014 ORTHO05D008894 1.2e-59 233.4 156 72.4
COL.COLO4_07554 Corchorus olitorius HOM05D007014 ORTHO05D008894 1.6e-59 233.0 151 76.8
Prupe.3G155400 Prunus persica HOM05D007014 ORTHO05D008894 3.5e-59 231.9 157 68.8
Dinv02170 Davidia involucrata HOM05D007014 ORTHO05D008894 7.7e-59 230.7 155 69.7
Potri.013G134102 Populus trichocarpa HOM05D007014 ORTHO05D008894 7.7e-59 230.7 153 71.9
Duzib052G1001 Durio zibethinus HOM05D007014 ORTHO05D008894 1.7e-58 229.6 155 74.8
Sed0017748 Sechium edule HOM05D007014 ORTHO05D008894 2.9e-58 228.8 154 70.1
Potri.013G134000 Populus trichocarpa HOM05D007014 ORTHO05D008894 3.8e-58 228.4 153 71.2
Lj8A113T47 Lonicera japonica HOM05D007014 ORTHO05D008894 5.0e-58 228.0 155 73.5
Sabra13G0113800 Salix brachista HOM05D007014 ORTHO05D008894 8.6e-58 227.3 149 71.8
Gohir.D13G066000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 1.1e-57 226.9 150 74.7
Gorai.013G075300 Gossypium raimondii HOM05D007014 ORTHO05D008894 1.1e-57 226.9 150 74.7
CAN.G486.11 Capsicum annuum HOM05D007014 ORTHO05D008894 2.5e-57 225.7 155 67.1
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 5.5e-57 224.6 160 68.8
Nitab4.5_0003022g0100 Nicotiana tabacum HOM05D007014 ORTHO05D008894 5.5e-57 224.6 155 69.0
MD09G1249800 Malus domestica HOM05D007014 ORTHO05D008894 9.5e-57 223.8 158 68.4
Manes.12G090900 Manihot esculenta HOM05D007014 ORTHO05D008894 9.5e-57 223.8 151 69.5
RcHm_v2.0_Chr6g0277731 Rosa chinensis HOM05D007014 ORTHO05D008894 9.5e-57 223.8 152 67.8
Cpa.g.sc34.144 Carica papaya HOM05D007014 ORTHO05D008894 1.2e-56 223.4 148 71.6
SalBow1G7232 Salvia bowleyana HOM05D007014 ORTHO05D008894 1.2e-56 223.4 150 69.3
Gohir.A13G056000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 1.6e-56 223.0 153 71.9
Peaxi162Scf02133g00022 Petunia axillaris HOM05D007014 ORTHO05D008894 1.6e-56 223.0 155 67.7
TWI36G0686 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 2.8e-56 222.2 150 70.0
PGSC0003DMG400007868 Solanum tuberosum HOM05D007014 ORTHO05D008894 4.7e-56 221.5 150 69.3
HanXRQChr17g0553541 Helianthus annuus HOM05D007014 ORTHO05D008894 1.0e-55 220.3 151 68.9
Sc21g0002660 Simmondsia chinensis HOM05D007014 ORTHO05D008894 1.0e-55 220.3 155 67.1
Psat7g157760 Pisum sativum HOM05D007014 ORTHO05D008894 1.4e-55 219.9 151 70.9
FvH4_2g15130 Fragaria vesca HOM05D007014 ORTHO05D008894 1.8e-55 219.5 153 68.6
Oeu029922.1 Olea europaea HOM05D007014 ORTHO05D008894 1.8e-55 219.5 150 69.3
PGSC0003DMG400007866 Solanum tuberosum HOM05D007014 ORTHO05D008894 1.8e-55 219.5 150 68.7
Ca_28202_v3 Cicer arietinum L. HOM05D007014 ORTHO05D008894 2.3e-55 219.2 155 69.0
Ciclev10022631m.g Citrus clementina HOM05D007014 ORTHO05D008894 2.3e-55 219.2 150 68.7
vmacro09278 Vaccinium macrocarpon HOM05D007014 ORTHO05D008894 2.3e-55 219.2 151 66.9
CSS0024097 Camellia sinensis var. sinensis HOM05D007014 ORTHO05D008894 3.0e-55 218.8 156 68.6
FAN27G2134 Fragaria x ananassa HOM05D007014 ORTHO05D008894 3.0e-55 218.8 153 68.6
TPR.G21768 Trifolium pratense HOM05D007014 ORTHO05D008894 3.0e-55 218.8 157 69.4
Ciclev10022606m.g Citrus clementina HOM05D007014 ORTHO05D008894 4.0e-55 218.4 150 68.0
Glyma.12G111800 Glycine max HOM05D007014 ORTHO05D008894 6.8e-55 217.6 157 69.4
TAR629G1268 Trochodendron aralioides HOM05D007014 ORTHO05D008894 6.8e-55 217.6 156 66.0
Medtr4g046047 Medicago truncatula HOM05D007014 ORTHO05D008894 1.2e-54 216.9 151 68.9
Solyc12g010680.3 Solanum lycopersicum HOM05D007014 ORTHO05D008894 2.0e-54 216.1 150 70.0
CANSAT78G1474 Cannabis sativa HOM05D007014 ORTHO05D008894 2.6e-54 215.7 149 67.8
Sopen12g005310 Solanum pennellii HOM05D007014 ORTHO05D008894 2.6e-54 215.7 150 68.7
Lj3g0024821 Lotus japonicus HOM05D007014 ORTHO05D008894 3.4e-54 215.3 157 68.8
Rhsim04G0068000 Rhododendron simsii HOM05D007014 ORTHO05D008894 3.4e-54 215.3 151 65.6
EL10Ac9g20747 Beta vulgaris HOM05D007014 ORTHO05D008894 5.7e-54 214.5 153 64.7
Aqoxy4G01010 Aquilegia oxysepala HOM05D007014 ORTHO05D008894 1.3e-53 213.4 152 63.8
SGA_v2.0_scaffold307G48064 Striga asiatica HOM05D007014 ORTHO05D008894 1.7e-53 213.0 141 70.9
Phvul.011G117200 Phaseolus vulgaris HOM05D007014 ORTHO05D008894 2.2e-53 212.6 157 68.2
MSTRG.12316 Avicennia marina HOM05D007014 ORTHO05D008894 4.9e-53 211.5 150 65.3
Cc05_g06870 Coffea canephora HOM05D007014 ORTHO05D008894 1.1e-52 210.3 150 68.0
FAN15G2141 Fragaria x ananassa HOM05D007014 ORTHO05D008894 1.1e-52 210.3 151 67.5
arahy.Tifrunner.gnm1.ann1.YPG8JQ Arachis hypogaea HOM05D007014 ORTHO05D008894 1.4e-52 209.9 153 64.7
arahy.Tifrunner.gnm1.ann1.1ZYA2W Arachis hypogaea HOM05D007014 ORTHO05D008894 3.2e-52 208.8 153 64.7
arahy.Tifrunner.gnm1.ann1.UXPW02 Arachis hypogaea HOM05D007014 ORTHO05D008894 4.1e-52 208.4 153 64.1
Nitab4.5_0002575g0020 Nicotiana tabacum HOM05D007014 ORTHO05D008894 5.4e-52 208.0 172 60.5
Migut.H01076 Erythranthe guttata HOM05D007014 ORTHO05D008894 7.0e-52 207.6 150 66.0
MBI17_g43194_MAGBIO Magnolia biondii HOM05D007014 ORTHO05D008894 1.2e-51 206.8 156 65.4
PSO210G2618 Papaver somniferum HOM05D007014 ORTHO05D008894 1.2e-51 206.8 156 62.8
CiPaw.03G175500 Carya illinoinensis HOM05D007014 ORTHO05D008894 5.9e-51 204.5 135 68.9
PSO832G4125 Papaver somniferum HOM05D007014 ORTHO05D008894 1.3e-50 203.4 156 62.2
unitig_21.g20401 Utricularia gibba HOM05D007014 ORTHO05D008894 1.7e-50 203.0 153 62.7
ATR0680G283 Amborella trichopoda HOM05D007014 ORTHO05D008894 3.3e-49 198.7 162 60.5
Glyma.06G293600 Glycine max HOM05D007014 ORTHO05D008894 7.3e-49 197.6 143 66.4
VMungo1127G0420 Vigna mungo HOM05D007014 ORTHO05D008894 7.3e-49 197.6 181 58.0
CDE02G4296 Ceratophyllum demersum HOM05D007014 ORTHO05D008894 1.8e-47 193.0 150 59.3
FAN24G2354 Fragaria x ananassa HOM05D007014 ORTHO05D008894 1.8e-47 193.0 152 63.8
C08p52730 Brassica napus HOM05D007014 ORTHO05D008894 5.2e-47 191.4 108 88.0
arahy.Tifrunner.gnm1.ann1.THUB96 Arachis hypogaea HOM05D007014 ORTHO05D008894 8.9e-47 190.7 134 67.2
HPP92_002954 Vanilla planifolia HOM05D007014 ORTHO05D008894 1.2e-46 190.3 145 64.8
A09p68280 Brassica napus HOM05D001041 ORTHO05D000846 2.0e-46 189.5 107 86.9
Lsat_1_v5_gn_8_133041 Lactuca sativa HOM05D007014 ORTHO05D008894 4.4e-46 188.3 152 59.2
ECA233G3399 Erigeron canadensis HOM05D007880 ORTHO05D003386 1.3e-45 186.8 134 65.7
TWI36G1550 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 1.1e-44 183.7 151 59.6
Zm00001eb044470 Zea mays HOM05D007014 ORTHO05D008894 2.4e-44 182.6 151 58.3
Zm00001eb044400 Zea mays HOM05D007014 ORTHO05D008894 3.0e-42 175.6 151 57.6
Mapoly0101s0002 Marchantia polymorpha HOM05D007014 ORTHO05D008894 2.0e-38 162.9 149 59.1
Os10g0500400 Oryza sativa ssp. japonica HOM05D007014 ORTHO05D008894 1.3e-37 160.2 164 51.8
Lalb_Chr01g0005301 Lupinus albus HOM05D007014 ORTHO05D008894 6.6e-34 147.9 92 75.0
Actinidia30478 Actinidia chinensis HOM05D007014 ORTHO05D008894 1.1e-33 147.1 99 69.7
Lsat_1_v5_gn_8_132641 Lactuca sativa HOM05D007014 ORTHO05D008894 1.6e-32 143.3 90 74.4
AagrBONN_evm.TU.Sc2ySwM_344.4393 Anthoceros agrestis HOM05D007014 ORTHO05D008894 1.4e-31 140.2 147 50.3
Sabra11G0072100 Salix brachista HOM05D000036 ORTHO05D000095 1.2e-24 117.1 81 66.7
Sabra15G0066900 Salix brachista HOM05D000036 ORTHO05D000095 1.2e-24 117.1 81 66.7
QL12p004320 Quercus lobata HOM05D007014 ORTHO05D008894 4.7e-24 115.2 76 67.1
Ciclev10023600m.g Citrus clementina HOM05D007014 ORTHO05D008894 1.4e-23 113.6 76 67.1
Hund01169 Selenicereus undatus HOM05D007014 ORTHO05D008894 1.7e-21 106.7 84 60.7
Sabra13G0113700 Salix brachista HOM05D000264 ORTHO05D000152 3.8e-21 105.5 81 61.7
DCAR_013001 Daucus carota HOM05D007014 ORTHO05D008894 6.0e-19 98.2 81 56.8
PRCOL_00005877 Prasinoderma coloniale HOM05D007014 ORTHO05D008894 9.6e-17 90.9 100 48.0
AUR62037369 Chenopodium quinoa HOM05D007014 ORTHO05D008894 2.1e-16 89.7 67 62.7
MELO3C013609.2 Cucumis melo HOM05D007014 ORTHO05D008894 4.8e-16 88.6 65 66.2
SalBow1G7442 Salvia bowleyana HOM05D007014 ORTHO05D008894 3.5e-11 72.4 49 61.2
Cre17.g705950 Chlamydomonas reinhardtii HOM05D007014 ORTHO05D008894 8.7e-10 67.8 129 34.9
Pp3c2_27490 Physcomitrium patens HOM05D007014 ORTHO05D008894 1.3e-08 63.9 78 46.2
Haze_26658 Corylus avellana HOM05D002214 ORTHO05D005113 2.0e-06 56.6 112 40.2


User provided reference genes

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