Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 2.7e-84 315.5 178 100.0
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 1.4e-77 293.1 175 90.3
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 1.4e-77 293.1 175 90.3
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 2.4e-77 292.4 175 89.1
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 1.6e-76 289.7 175 89.7
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 9.5e-74 280.4 175 87.4
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 9.5e-74 280.4 177 88.7
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 1.8e-72 276.2 176 86.4
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 3.1e-72 275.4 175 86.3
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 6.8e-72 274.2 178 87.6
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 4.4e-71 271.6 176 87.5
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 7.6e-71 270.8 175 84.0
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 6.4e-70 267.7 178 85.4
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 6.4e-70 267.7 178 85.4
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 1.4e-69 266.5 179 85.5
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 3.2e-69 265.4 175 87.4
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 3.9e-67 258.5 175 82.3
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 1.2e-55 220.3 179 69.8
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.6e-49 199.9 174 65.5
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 2.8e-49 199.1 155 68.4
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 3.7e-49 198.7 157 69.4
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 4.8e-49 198.4 182 63.7
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 6.2e-49 198.0 157 70.1
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 1.1e-48 197.2 180 62.8
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 1.8e-48 196.4 178 62.9
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 4.0e-48 195.3 136 77.2
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 1.2e-47 193.7 157 67.5
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 1.2e-47 193.7 178 62.4
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 1.5e-47 193.4 182 63.7
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 2.0e-47 193.0 177 61.0
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 2.0e-47 193.0 136 77.2
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 3.4e-47 192.2 138 75.4
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 4.5e-47 191.8 175 62.3
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 4.5e-47 191.8 181 61.9
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 5.8e-47 191.4 175 62.3
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 1.3e-46 190.3 178 64.0
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 1.3e-46 190.3 136 72.8
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 2.2e-46 189.5 170 63.5
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 2.9e-46 189.1 136 72.8
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 2.9e-46 189.1 182 61.5
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 6.4e-46 188.0 166 65.7
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 8.4e-46 187.6 133 73.7
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 8.4e-46 187.6 180 61.1
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 1.1e-45 187.2 166 62.7
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 1.1e-45 187.2 180 62.2
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 2.4e-45 186.0 137 71.5
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 2.4e-45 186.0 137 71.5
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 2.4e-45 186.0 178 61.2
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 7.1e-45 184.5 166 61.4
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 9.3e-45 184.1 136 68.4
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 1.2e-44 183.7 178 59.6
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 1.6e-44 183.3 136 75.0
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 1.6e-44 183.3 180 58.9
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 1.6e-44 183.3 156 66.7
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 1.6e-44 183.3 154 63.6
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 2.1e-44 183.0 139 69.8
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 2.1e-44 183.0 174 61.5
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 2.7e-44 182.6 166 59.0
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 3.5e-44 182.2 178 59.6
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 6.0e-44 181.4 174 59.2
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 6.0e-44 181.4 172 60.5
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 6.0e-44 181.4 178 59.0
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 7.9e-44 181.0 136 69.9
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 7.9e-44 181.0 173 60.1
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 7.9e-44 181.0 179 59.8
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 7.9e-44 181.0 170 60.6
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 1.0e-43 180.6 136 69.9
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 1.0e-43 180.6 178 59.0
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 1.0e-43 180.6 136 69.1
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.3e-43 180.3 183 58.5
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 1.3e-43 180.3 136 71.3
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 1.8e-43 179.9 133 70.7
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 1.8e-43 179.9 178 58.4
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.8e-43 179.9 110 80.0
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 1.8e-43 179.9 110 80.0
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 1.8e-43 179.9 115 81.7
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 1.8e-43 179.9 179 57.5
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 2.3e-43 179.5 181 58.0
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 2.3e-43 179.5 135 68.9
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 3.0e-43 179.1 175 61.1
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.0e-43 179.1 174 58.6
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 3.0e-43 179.1 137 70.1
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 5.1e-43 178.3 115 77.4
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 5.1e-43 178.3 136 67.6
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 5.1e-43 178.3 136 67.6
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 6.7e-43 177.9 135 68.9
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 6.7e-43 177.9 137 68.6
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 8.7e-43 177.6 112 79.5
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 1.5e-42 176.8 115 78.3
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 1.5e-42 176.8 142 66.2
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 1.9e-42 176.4 160 62.5
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 2.5e-42 176.0 156 64.1
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 3.3e-42 175.6 181 56.4
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 4.3e-42 175.3 187 58.3
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 4.3e-42 175.3 136 69.1
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 4.3e-42 175.3 136 69.1
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 4.3e-42 175.3 173 60.1
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 5.6e-42 174.9 136 67.6
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 5.6e-42 174.9 136 67.6
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 7.4e-42 174.5 179 59.2
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 7.4e-42 174.5 137 67.2
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 2.8e-41 172.6 123 70.7
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 3.7e-41 172.2 136 67.6
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 8.2e-41 171.0 133 68.4
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 1.1e-40 170.6 136 67.6
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 3.1e-40 169.1 184 56.0
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 4.0e-40 168.7 178 54.5
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 6.9e-40 167.9 136 65.4
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 2.0e-39 166.4 103 79.6
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 2.0e-39 166.4 176 54.5
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 5.8e-39 164.9 179 54.7
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 1.0e-38 164.1 107 74.8
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 2.2e-38 162.9 121 68.6
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 2.7e-36 156.0 134 64.2
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 2.5e-34 149.4 138 58.0
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 1.4e-32 143.7 85 81.2
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 9.0e-32 141.0 128 57.8
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 2.9e-30 136.0 110 62.7
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 6.5e-30 134.8 115 60.0
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 1.4e-29 133.7 123 56.1
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 1.0e-27 127.5 119 57.1
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 5.1e-27 125.2 140 53.6
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 3.1e-24 115.9 147 47.6
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 6.5e-22 108.2 147 41.5
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 1.9e-21 106.7 179 38.0
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 9.7e-18 94.4 89 58.4
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 1.7e-17 93.6 94 58.5
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 2.6e-15 86.3 97 53.6


User provided reference genes

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