Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 1.4e-262 909.1 469 100.0
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 5.8e-195 684.5 479 78.3
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 5.4e-193 677.9 484 78.5
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 2.7e-184 649.0 482 74.3
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 1.1e-180 637.1 488 75.0
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 1.6e-176 623.2 487 73.5
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 6.2e-173 611.3 488 73.4
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 3.5e-168 595.5 468 73.1
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 1.1e-164 583.9 474 71.9
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 2.2e-154 549.7 482 67.0
AT1G02960 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 1.2e-139 500.7 387 73.6
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 3.2e-137 492.7 482 58.9
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 1.6e-112 410.6 468 54.7
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 2.5e-97 360.1 217 88.5
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 1.9e-52 211.1 484 34.7
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 4.8e-48 196.4 524 33.8
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 1.5e-46 191.4 512 32.8
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 1.7e-45 188.0 516 32.0
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 1.8e-42 177.9 507 30.8
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 2.3e-42 177.6 514 31.7
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 4.8e-40 169.9 493 30.8
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 1.1e-39 168.7 506 31.6
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 1.5e-38 164.9 558 28.1
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 3.4e-38 163.7 509 28.9
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 4.5e-38 163.3 495 29.9
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 7.6e-38 162.5 508 30.1
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 1.2e-35 155.2 485 29.3
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 4.6e-35 153.3 337 33.5
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 1.8e-34 151.4 477 30.0
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 3.0e-34 150.6 357 31.4
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 1.1e-33 148.7 490 30.6
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 1.9e-33 147.9 443 30.7
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 2.2e-32 144.4 513 29.2
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 3.7e-32 143.7 580 26.4
BcaB06g26239 Brassica carinata HOM05D007164 ORTHO05D008802 1.5e-30 138.3 101 75.2
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 1.5e-30 138.3 239 38.1
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 1.5e-30 138.3 503 28.0
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 1.7e-29 134.8 423 28.1
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 8.5e-29 132.5 518 26.1
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 8.5e-29 132.5 487 29.6
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 1.1e-28 132.1 487 30.6
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 1.1e-28 132.1 383 32.1
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 7.2e-28 129.4 524 26.1
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 1.6e-27 128.3 420 29.0
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 1.6e-27 128.3 496 27.2
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 1.4e-26 125.2 220 39.1
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 3.0e-26 124.0 331 31.7
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 4.3e-25 120.2 514 26.8
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 7.4e-25 119.4 510 27.8
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 7.4e-25 119.4 505 25.7
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 2.2e-24 117.9 485 28.5
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 2.2e-24 117.9 501 27.5
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 3.1e-23 114.0 332 30.4
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 3.1e-23 114.0 478 26.6
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 4.1e-23 113.6 518 25.9
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 6.9e-23 112.8 389 29.0
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 1.2e-22 112.1 220 34.1
BcaB06g26240 Brassica carinata HOM05D007164 ORTHO05D008802 1.3e-21 108.6 175 44.0
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 2.2e-21 107.8 197 38.1
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 3.8e-21 107.1 511 25.6
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 1.9e-20 104.8 408 28.9
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 4.2e-20 103.6 394 27.2
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 5.5e-20 103.2 491 27.1
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 7.2e-20 102.8 505 25.3
Carub.0033s0003 Capsella rubella HOM05D003036 ORTHO05D008712 2.7e-19 100.9 80 71.2
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 4.7e-19 100.1 197 34.5
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 7.9e-19 99.4 264 32.6
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 6.7e-18 96.3 354 28.0
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 2.0e-17 94.7 192 30.7
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 7.4e-17 92.8 204 32.8
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 4.8e-16 90.1 256 32.0
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 8.2e-16 89.4 167 34.1
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 1.1e-15 89.0 273 29.3
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 4.1e-15 87.0 461 24.3
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 7.0e-15 86.3 145 33.8
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 2.0e-14 84.7 133 34.6
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 3.5e-14 84.0 530 24.3
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 5.9e-14 83.2 312 26.0
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 7.7e-14 82.8 420 25.7
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 1.3e-13 82.0 439 24.8
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 6.5e-13 79.7 353 25.2
HanXRQChr10g0283981 Helianthus annuus HOM05D007164 ORTHO05D008802 8.5e-13 79.3 93 39.8
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 8.5e-13 79.3 146 37.7
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 2.5e-12 77.8 410 26.3
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 3.2e-12 77.4 332 26.8
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 2.1e-11 74.7 337 25.5
Pp3c3_15490 Physcomitrium patens HOM05D007164 ORTHO05D008802 8.8e-10 69.3 121 31.4
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 1.1e-09 68.9 200 28.0
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 1.1e-09 68.9 450 25.8
SEGI_29739 Sequoiadendron giganteum HOM05D007164 ORTHO05D008802 2.6e-09 67.8 108 29.6
MELO3C019559.2 Cucumis melo HOM05D007164 ORTHO05D008802 7.5e-09 66.2 306 28.1
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 9.7e-09 65.9 409 25.7
ATR0691G271 Amborella trichopoda HOM05D007164 ORTHO05D008802 1.7e-08 65.1 170 28.8
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 3.1e-07 60.8 102 39.2
AT1G02965 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 4.1e-07 60.5 60 60.0
Peaxi162Scf00067g02422 Petunia axillaris HOM05D007164 ORTHO05D008802 4.5e-06 57.0 401 24.4


User provided reference genes

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