Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g01440 Schrenkiella parvula HOM05D006046 ORTHO05D007580 3.1e-125 451.8 227 100.0
BraA10t42387Z Brassica rapa HOM05D006046 ORTHO05D007580 3.5e-81 305.4 317 57.7
A10p01090 Brassica napus HOM05D006046 ORTHO05D007580 7.9e-81 304.3 317 57.4
Sp6g01580 Schrenkiella parvula HOM05D006046 ORTHO05D007580 1.1e-74 283.9 314 54.5
C05p01130 Brassica napus HOM05D006046 ORTHO05D007580 1.9e-74 283.1 317 54.9
BolC5t28894H Brassica oleracea HOM05D006046 ORTHO05D007580 1.9e-74 283.1 317 54.9
Thhalv10028544m.g Eutrema salsugineum HOM05D006046 ORTHO05D007580 9.3e-74 280.8 314 53.8
Carub.0006s3551 Capsella rubella HOM05D006046 ORTHO05D007580 1.6e-73 280.0 314 53.8
AL6G51640 Arabidopsis lyrata HOM05D006046 ORTHO05D007580 1.8e-72 276.6 315 53.7
AT4G01690 Arabidopsis thaliana HOM05D006046 ORTHO05D007580 2.3e-72 276.2 315 53.3
Aa31LG5G1400 Aethionema arabicum HOM05D006046 ORTHO05D007580 1.3e-70 270.4 330 51.2
BcaC05g24615 Brassica carinata HOM05D006046 ORTHO05D007580 4.8e-70 268.5 318 53.1
CARHR249980 Cardamine hirsuta HOM05D006046 ORTHO05D007580 1.8e-69 266.5 315 53.0
THA.LOC104825927 Tarenaya hassleriana HOM05D006046 ORTHO05D007580 1.3e-67 260.4 325 49.8
Thecc.01G326200 Theobroma cacao HOM05D006046 ORTHO05D007580 6.5e-59 231.5 315 47.0
Atru.chr5.852 Acer truncatum HOM05D006046 ORTHO05D007580 8.5e-59 231.1 317 46.7
Gohir.A11G105300 Gossypium hirsutum HOM05D006046 ORTHO05D007580 9.4e-58 227.6 316 45.6
Gohir.D11G110200 Gossypium hirsutum HOM05D006046 ORTHO05D007580 3.6e-57 225.7 315 45.7
Gorai.007G117800 Gossypium raimondii HOM05D006046 ORTHO05D007580 3.6e-57 225.7 315 45.7
Manes.05G008200 Manihot esculenta HOM05D006046 ORTHO05D007580 1.0e-56 224.2 319 45.5
MD09G1291200 Malus domestica HOM05D006046 ORTHO05D007580 2.3e-56 223.0 327 45.3
Ciclev10019590m.g Citrus clementina HOM05D006046 ORTHO05D007580 1.1e-55 220.7 322 45.0
Medtr1g085730 Medicago truncatula HOM05D006046 ORTHO05D007580 1.5e-55 220.3 288 47.6
Cpa.g.sc57.26 Carica papaya HOM05D006046 ORTHO05D007580 2.5e-55 219.5 311 46.0
Prupe.3G001700 Prunus persica HOM05D006046 ORTHO05D007580 2.5e-55 219.5 319 45.1
Duzib133G1070 Durio zibethinus HOM05D006046 ORTHO05D007580 5.7e-55 218.4 291 46.0
Duzib138G1207 Durio zibethinus HOM05D006046 ORTHO05D007580 1.3e-54 217.2 311 44.7
RcHm_v2.0_Chr3g0485661 Rosa chinensis HOM05D006046 ORTHO05D007580 1.7e-54 216.9 306 45.1
TPR.G3061 Trifolium pratense HOM05D006046 ORTHO05D007580 4.8e-54 215.3 319 44.5
PGR142G1127 Punica granatum HOM05D006046 ORTHO05D007580 1.1e-53 214.2 294 44.2
COL.COLO4_23120 Corchorus olitorius HOM05D006046 ORTHO05D007580 2.4e-53 213.0 315 43.5
FvH4_1g26170 Fragaria vesca HOM05D006046 ORTHO05D007580 9.1e-53 211.1 303 43.9
FAN19G1511 Fragaria x ananassa HOM05D006046 ORTHO05D007580 9.1e-53 211.1 303 43.9
FAN26G1773 Fragaria x ananassa HOM05D006046 ORTHO05D007580 1.2e-52 210.7 314 43.0
Dinv33175 Davidia involucrata HOM05D006046 ORTHO05D007580 1.5e-52 210.3 311 44.1
Psat6g158600 Pisum sativum HOM05D006046 ORTHO05D007580 2.0e-52 209.9 306 45.1
FAN23G1049 Fragaria x ananassa HOM05D006046 ORTHO05D007580 3.4e-52 209.1 285 44.6
Glyma.10G138600 Glycine max HOM05D006046 ORTHO05D007580 1.7e-51 206.8 313 45.0
Potri.002G186300 Populus trichocarpa HOM05D006046 ORTHO05D007580 1.7e-51 206.8 320 42.8
TWI59G0782 Tripterygium wilfordii HOM05D006046 ORTHO05D007580 2.9e-51 206.1 321 42.1
CANSAT25G3010 Cannabis sativa HOM05D006046 ORTHO05D007580 5.0e-51 205.3 288 44.8
MELO3C005189.2 Cucumis melo HOM05D006046 ORTHO05D007580 5.0e-51 205.3 281 45.6
Eucgr.K00558 Eucalyptus grandis HOM05D006046 ORTHO05D007580 5.0e-51 205.3 286 44.4
arahy.Tifrunner.gnm1.ann1.11DDVR Arachis hypogaea HOM05D006046 ORTHO05D007580 6.5e-51 204.9 307 43.3
Potri.014G111600 Populus trichocarpa HOM05D006046 ORTHO05D007580 6.5e-51 204.9 319 42.3
CsaV3_5G018640 Cucumis sativus L. HOM05D006046 ORTHO05D007580 8.5e-51 204.5 281 45.6
Sed0002893 Sechium edule HOM05D006046 ORTHO05D007580 1.1e-50 204.1 313 43.1
GSVIVG01028241001 Vitis vinifera HOM05D006046 ORTHO05D007580 1.1e-50 204.1 285 44.2
arahy.Tifrunner.gnm1.ann1.01TYUM Arachis hypogaea HOM05D006046 ORTHO05D007580 1.4e-50 203.8 303 43.9
Sabra02G0148500 Salix brachista HOM05D006046 ORTHO05D007580 1.4e-50 203.8 319 42.6
Phvul.007G208700 Phaseolus vulgaris HOM05D006046 ORTHO05D007580 1.9e-50 203.4 302 45.0
Lalb_Chr21g0309871 Lupinus albus HOM05D006046 ORTHO05D007580 2.5e-50 203.0 310 44.2
QL12p035018 Quercus lobata HOM05D006046 ORTHO05D007580 2.5e-50 203.0 304 42.8
FAN28G0956 Fragaria x ananassa HOM05D006046 ORTHO05D007580 3.2e-50 202.6 316 42.1
CDE11G0173 Ceratophyllum demersum HOM05D006046 ORTHO05D007580 4.2e-50 202.2 319 42.9
Sabra02G0148100 Salix brachista HOM05D006046 ORTHO05D007580 4.2e-50 202.2 305 43.3
Sed0026667 Sechium edule HOM05D006046 ORTHO05D007580 2.7e-49 199.5 281 44.5
CiPaw.07G126200 Carya illinoinensis HOM05D006046 ORTHO05D007580 4.7e-49 198.7 303 42.6
CSS0022330 Camellia sinensis var. sinensis HOM05D006046 ORTHO05D007580 6.1e-49 198.4 288 44.4
Nn4g25300 Nelumbo nucifera HOM05D006046 ORTHO05D007580 1.8e-48 196.8 288 44.4
TAR633G1601 Trochodendron aralioides HOM05D006046 ORTHO05D007580 1.8e-48 196.8 308 41.9
Actinidia21336 Actinidia chinensis HOM05D006046 ORTHO05D007580 1.5e-47 193.7 287 44.3
TAR362G0326 Trochodendron aralioides HOM05D006046 ORTHO05D007580 1.5e-47 193.7 316 41.8
Aqoxy5G02854 Aquilegia oxysepala HOM05D006046 ORTHO05D007580 5.7e-47 191.8 286 43.4
DCAR_002940 Daucus carota HOM05D006046 ORTHO05D007580 9.7e-47 191.0 278 45.0
Lalb_Chr02g0147181 Lupinus albus HOM05D006046 ORTHO05D007580 1.3e-46 190.7 295 42.0
VMungo0720G0414 Vigna mungo HOM05D006046 ORTHO05D007580 1.3e-46 190.7 343 39.9
Migut.D00009 Erythranthe guttata HOM05D006046 ORTHO05D007580 3.7e-46 189.1 283 42.4
Lsat_1_v5_gn_9_7041 Lactuca sativa HOM05D006046 ORTHO05D007580 3.7e-46 189.1 291 41.6
PSO761G0347 Papaver somniferum HOM05D006046 ORTHO05D007580 4.8e-46 188.7 299 41.1
PSO210G0070 Papaver somniferum HOM05D006046 ORTHO05D007580 6.3e-46 188.3 305 41.0
Rhsim01G0000700 Rhododendron simsii HOM05D006046 ORTHO05D007580 1.8e-45 186.8 285 42.1
Hund03590 Selenicereus undatus HOM05D006046 ORTHO05D007580 1.8e-45 186.8 308 40.9
Lj5g0023586 Lotus japonicus HOM05D006046 ORTHO05D007580 1.2e-44 184.1 311 41.5
HanXRQChr10g0286481 Helianthus annuus HOM05D006046 ORTHO05D007580 1.5e-44 183.7 299 41.5
HPP92_010589 Vanilla planifolia HOM05D006046 ORTHO05D007580 1.7e-43 180.3 286 40.6
CAN.G179.31 Capsicum annuum HOM05D006046 ORTHO05D007580 1.1e-42 177.6 286 40.9
AUR62042113 Chenopodium quinoa HOM05D006046 ORTHO05D007580 3.2e-42 176.0 258 43.8
SGA_v2.0_scaffold572G52966 Striga asiatica HOM05D006046 ORTHO05D007580 4.2e-42 175.6 283 41.7
MSTRG.18059 Avicennia marina HOM05D006046 ORTHO05D007580 5.5e-42 175.3 314 37.9
EL10Ac2g02399 Beta vulgaris HOM05D006046 ORTHO05D007580 1.6e-41 173.7 262 43.1
Peaxi162Scf00309g00623 Petunia axillaris HOM05D006046 ORTHO05D007580 2.1e-41 173.3 289 40.5
Sabra14G0082000 Salix brachista HOM05D006046 ORTHO05D007580 2.7e-41 172.9 272 41.9
Sopen01g030600 Solanum pennellii HOM05D006046 ORTHO05D007580 2.7e-41 172.9 283 40.3
PGSC0003DMG400001117 Solanum tuberosum HOM05D006046 ORTHO05D007580 3.6e-41 172.6 283 40.3
ECA247G1361 Erigeron canadensis HOM05D006046 ORTHO05D007580 4.7e-41 172.2 285 40.4
Solyc01g079090.4 Solanum lycopersicum HOM05D006046 ORTHO05D007580 4.7e-41 172.2 283 40.3
Ah.12g061390 Amaranthus hybridus HOM05D006046 ORTHO05D007580 1.0e-40 171.0 300 39.7
Zm00001eb332380 Zea mays HOM05D006046 ORTHO05D007580 1.4e-40 170.6 306 39.5
ATR0796G090 Amborella trichopoda HOM05D006046 ORTHO05D007580 1.8e-40 170.2 309 39.5
Os01g0286600 Oryza sativa ssp. japonica HOM05D006046 ORTHO05D007580 1.8e-40 170.2 280 40.7
Hma1.2p1_0408F.1_g146250 Hydrangea macrophylla HOM05D006046 ORTHO05D007580 6.7e-40 168.3 250 43.6
Cc01_g21760 Coffea canephora HOM05D006046 ORTHO05D007580 9.7e-39 164.5 281 39.5
Lj1C7T2 Lonicera japonica HOM05D006046 ORTHO05D007580 5.9e-36 155.2 256 40.2
Pp3c1_34400 Physcomitrium patens HOM05D006046 ORTHO05D007580 5.9e-36 155.2 257 39.3
AagrBONN_evm.TU.Sc2ySwM_368.2775 Anthoceros agrestis HOM05D006046 ORTHO05D007580 2.2e-35 153.3 257 38.5
Mapoly0001s0469 Marchantia polymorpha HOM05D006046 ORTHO05D007580 1.2e-33 147.5 257 39.3
Oeu052589.3 Olea europaea HOM05D006046 ORTHO05D007580 1.6e-33 147.1 397 30.7
SMO356G0553 Selaginella moellendorffii HOM05D006046 ORTHO05D007580 8.0e-33 144.8 280 34.6
CBR_g88557 Chara braunii HOM05D006046 ORTHO05D007580 5.7e-31 138.7 274 36.1
Cre09.g396300 Chlamydomonas reinhardtii HOM05D006046 ORTHO05D007580 1.0e-27 127.9 278 32.7
Ca_10238_v3 Cicer arietinum L. HOM05D006046 ORTHO05D007580 1.1e-26 124.4 75 80.0
TWI23G1081 Tripterygium wilfordii HOM05D006046 ORTHO05D007580 1.5e-26 124.0 118 56.8
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 3.2e-26 122.9 74 81.1
arahy.Tifrunner.gnm1.ann1.45WRUP Arachis hypogaea HOM05D006046 ORTHO05D007580 5.5e-26 122.1 192 45.8
Hma1.2p1_0408F.1_g146260 Hydrangea macrophylla HOM05D006046 ORTHO05D007580 5.5e-26 122.1 74 78.4
CDE05G3479 Ceratophyllum demersum HOM05D006046 ORTHO05D007580 1.6e-25 120.6 118 58.5
Haze_05155 Corylus avellana HOM05D006046 ORTHO05D007580 2.7e-25 119.8 74 78.4
Nitab4.5_0003092g0030 Nicotiana tabacum HOM05D006046 ORTHO05D007580 8.0e-25 118.2 74 77.0
ClCG01G007200 Citrullus lanatus HOM05D006046 ORTHO05D007580 2.3e-24 116.7 74 77.0
AUR62040510 Chenopodium quinoa HOM05D006046 ORTHO05D007580 4.4e-23 112.5 258 34.1
vmacro02355 Vaccinium macrocarpon HOM05D006046 ORTHO05D007580 4.4e-23 112.5 74 73.0
SEGI_28664 Sequoiadendron giganteum HOM05D006046 ORTHO05D007580 1.6e-20 104.0 73 67.1
MCO14G379 Micromonas commoda HOM05D006046 ORTHO05D007580 4.5e-20 102.4 259 31.7
PRCOL_00002487 Prasinoderma coloniale HOM05D006046 ORTHO05D007580 5.6e-18 95.5 258 31.0
Nitab4.5_0000222g0400 Nicotiana tabacum HOM05D006046 ORTHO05D007580 1.8e-16 90.5 54 79.6


User provided reference genes

Program Settings