Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g01070 Schrenkiella parvula HOM05D006425 ORTHO05D007312 0.0e+00 2180.6 1079 100.0
Thhalv10006637m.g Eutrema salsugineum HOM05D006425 ORTHO05D007312 0.0e+00 2001.9 1076 92.3
CARHR001250 Cardamine hirsuta HOM05D006425 ORTHO05D007312 0.0e+00 1962.2 1080 90.1
AL1G11260 Arabidopsis lyrata HOM05D006425 ORTHO05D007312 0.0e+00 1961.8 1074 91.0
Carub.0008s1137 Capsella rubella HOM05D006425 ORTHO05D007312 0.0e+00 1958.7 1079 90.4
BraA09t42237Z Brassica rapa HOM05D006425 ORTHO05D007312 0.0e+00 1921.7 1087 89.2
A09p69000 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1921.4 1083 89.6
C08p53570 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1914.0 1084 89.2
BolC8t52871H Brassica oleracea HOM05D006425 ORTHO05D007312 0.0e+00 1904.0 1083 88.6
Aa31LG1G10590 Aethionema arabicum HOM05D006425 ORTHO05D007312 0.0e+00 1815.4 1079 84.3
THA.LOC104815884 Tarenaya hassleriana HOM05D006425 ORTHO05D007312 0.0e+00 1800.0 1086 82.7
AT1G01220 Arabidopsis thaliana HOM05D006425 ORTHO05D007312 0.0e+00 1759.6 968 90.5
Atru.chr5.713 Acer truncatum HOM05D006425 ORTHO05D007312 0.0e+00 1631.3 1081 75.8
Potri.014G101400 Populus trichocarpa HOM05D006425 ORTHO05D007312 0.0e+00 1618.2 1083 74.1
Sabra14G0074600 Salix brachista HOM05D006425 ORTHO05D007312 0.0e+00 1605.9 1086 73.8
CSS0033565 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 0.0e+00 1603.2 1083 74.8
Duzib138G0057 Durio zibethinus HOM05D006425 ORTHO05D007312 0.0e+00 1598.9 1080 73.5
Cpa.g.sc139.7 Carica papaya HOM05D006425 ORTHO05D007312 0.0e+00 1597.4 1089 73.6
MD07G1153800 Malus domestica HOM05D006425 ORTHO05D007312 0.0e+00 1590.5 1080 72.5
Thecc.01G338700 Theobroma cacao HOM05D006425 ORTHO05D007312 0.0e+00 1588.2 1080 73.6
TWI23G0835 Tripterygium wilfordii HOM05D006425 ORTHO05D007312 0.0e+00 1587.0 1078 73.2
Cfa003773 Carpinus fangiana HOM05D006425 ORTHO05D007312 0.0e+00 1583.2 1083 72.6
Manes.01G243600 Manihot esculenta HOM05D006425 ORTHO05D007312 0.0e+00 1571.6 1084 73.4
CsaV3_3G007870 Cucumis sativus L. HOM05D006425 ORTHO05D007312 0.0e+00 1567.7 1086 71.7
QL08p046032 Quercus lobata HOM05D006425 ORTHO05D007312 0.0e+00 1565.8 1073 72.8
Eucgr.E03445 Eucalyptus grandis HOM05D006425 ORTHO05D007312 0.0e+00 1564.3 1072 72.3
Haze_15687 Corylus avellana HOM05D006425 ORTHO05D007312 0.0e+00 1558.9 1110 70.1
RcHm_v2.0_Chr1g0360431 Rosa chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1556.6 1083 71.7
TAR629G2477 Trochodendron aralioides HOM05D006425 ORTHO05D007312 0.0e+00 1555.8 1082 71.8
COL.COLO4_06242 Corchorus olitorius HOM05D006425 ORTHO05D007312 0.0e+00 1553.5 1101 72.0
FvH4_7g17030 Fragaria vesca HOM05D006425 ORTHO05D007312 0.0e+00 1553.5 1078 71.7
Gorai.008G127000 Gossypium raimondii HOM05D006425 ORTHO05D007312 0.0e+00 1551.2 1076 71.5
VMungo0540G0548 Vigna mungo HOM05D006425 ORTHO05D007312 0.0e+00 1548.9 1084 71.6
arahy.Tifrunner.gnm1.ann1.V6VX4F Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1547.3 1104 69.8
Gohir.D12G117200 Gossypium hirsutum HOM05D006425 ORTHO05D007312 0.0e+00 1545.0 1076 71.3
Phvul.006G115200 Phaseolus vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1543.9 1076 71.2
Sed0010112 Sechium edule HOM05D006425 ORTHO05D007312 0.0e+00 1543.5 1086 70.5
Lj7C496T17 Lonicera japonica HOM05D006425 ORTHO05D007312 0.0e+00 1534.2 1091 71.3
Nn1g00347 Nelumbo nucifera HOM05D006425 ORTHO05D007312 0.0e+00 1534.2 1078 69.6
PGR102G0287 Punica granatum HOM05D006425 ORTHO05D007312 0.0e+00 1532.7 1075 71.2
Lj1g0017915 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1530.4 1078 70.6
Lalb_Chr04g0261441 Lupinus albus HOM05D006425 ORTHO05D007312 0.0e+00 1528.5 1086 70.8
Glyma.19G257700 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1527.7 1077 70.9
TPR.G4756 Trifolium pratense HOM05D006425 ORTHO05D007312 0.0e+00 1527.7 1082 70.1
Rhsim07G0002300 Rhododendron simsii HOM05D006425 ORTHO05D007312 0.0e+00 1523.1 1080 72.6
FAN10G2644 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1518.4 1071 71.0
Glyma.03G259000 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1518.4 1079 70.4
FAN10G4300 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1516.9 1076 70.6
Ca_09524_v3 Cicer arietinum L. HOM05D006425 ORTHO05D007312 0.0e+00 1512.7 1081 69.5
Sc13g0006630 Simmondsia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1511.9 1083 69.3
FAN06G4481 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1510.4 1073 70.9
GSVIVG01027188001 Vitis vinifera HOM05D006425 ORTHO05D007312 0.0e+00 1509.2 1084 69.4
Oeu007875.1 Olea europaea HOM05D006425 ORTHO05D007312 0.0e+00 1508.0 1080 69.6
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 0.0e+00 1507.7 1067 71.6
arahy.Tifrunner.gnm1.ann1.GF075D Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1505.3 1112 68.2
ECA236G2333 Erigeron canadensis HOM05D006425 ORTHO05D007312 0.0e+00 1503.4 1072 70.1
PGSC0003DMG400000238 Solanum tuberosum HOM05D006425 ORTHO05D007312 0.0e+00 1502.6 1076 69.8
PSO782G0220 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1501.1 1075 69.7
Psat3g001600 Pisum sativum HOM05D006425 ORTHO05D007312 0.0e+00 1501.1 1081 68.9
Aqoxy5G04315 Aquilegia oxysepala HOM05D006425 ORTHO05D007312 0.0e+00 1500.0 1075 68.7
FAN06G3842 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1499.6 1073 70.5
FAN03G0670 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1499.2 1072 70.5
CAN.G1415.13 Capsicum annuum HOM05D006425 ORTHO05D007312 0.0e+00 1497.6 1075 69.7
Solyc01g096160.4 Solanum lycopersicum HOM05D006425 ORTHO05D007312 0.0e+00 1497.6 1075 69.9
FAN01G0442 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1496.1 1073 70.4
Cc02_g39660 Coffea canephora HOM05D006425 ORTHO05D007312 0.0e+00 1495.3 1082 68.8
PSO063G5968 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1488.0 1075 69.4
MBI12_g20265_MAGBIO Magnolia biondii HOM05D006425 ORTHO05D007312 0.0e+00 1481.1 1076 69.1
Medtr7g117870 Medicago truncatula HOM05D006425 ORTHO05D007312 0.0e+00 1479.5 1082 68.1
Migut.B01889 Erythranthe guttata HOM05D006425 ORTHO05D007312 0.0e+00 1476.8 1076 68.2
MELO3C006005.2 Cucumis melo HOM05D006425 ORTHO05D007312 0.0e+00 1471.1 1081 69.3
HanXRQChr04g0120411 Helianthus annuus HOM05D006425 ORTHO05D007312 0.0e+00 1471.1 1077 67.9
SGA_v2.0_scaffold22G09958 Striga asiatica HOM05D006425 ORTHO05D007312 0.0e+00 1460.7 1076 68.0
ClCG05G000660 Citrullus lanatus HOM05D006425 ORTHO05D007312 0.0e+00 1459.5 1075 68.2
AUR62022731 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1454.9 1080 68.3
Peaxi162Scf00345g00024 Petunia axillaris HOM05D006425 ORTHO05D007312 0.0e+00 1452.6 1079 69.0
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 0.0e+00 1439.1 1072 68.1
Ah.05g179300 Amaranthus hybridus HOM05D006425 ORTHO05D007312 0.0e+00 1431.8 1079 67.1
AUR62004524 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1421.0 1080 66.9
vmacro04289 Vaccinium macrocarpon HOM05D006425 ORTHO05D007312 0.0e+00 1417.1 1204 62.7
Hund27175 Selenicereus undatus HOM05D006425 ORTHO05D007312 0.0e+00 1414.8 1085 66.7
Nitab4.5_0006770g0030 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1414.1 1075 67.3
Ciclev10018702m.g Citrus clementina HOM05D006425 ORTHO05D007312 0.0e+00 1403.7 982 71.6
HPP92_015094 Vanilla planifolia HOM05D006425 ORTHO05D007312 0.0e+00 1389.8 1082 64.5
ATR0757G210 Amborella trichopoda HOM05D006425 ORTHO05D007312 0.0e+00 1362.8 1075 64.1
Lsat_1_v5_gn_7_2761 Lactuca sativa HOM05D006425 ORTHO05D007312 0.0e+00 1361.7 1089 65.1
SalBow3G3533 Salvia bowleyana HOM05D006425 ORTHO05D007312 0.0e+00 1357.4 1127 62.6
Os03g0115100 Oryza sativa ssp. japonica HOM05D006425 ORTHO05D007312 0.0e+00 1345.5 1081 63.2
Zm00001eb001000 Zea mays HOM05D006425 ORTHO05D007312 0.0e+00 1314.3 1082 61.1
Lj1g0006712 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1293.9 934 69.0
SHI13064 Sapria himalayana HOM05D006425 ORTHO05D007312 0.0e+00 1267.3 1198 55.6
unitig_899.g14792 Utricularia gibba HOM05D006425 ORTHO05D007312 0.0e+00 1209.1 1065 58.6
CiPaw.02G042200 Carya illinoinensis HOM05D006425 ORTHO05D007312 0.0e+00 1157.5 757 75.6
Nitab4.5_0000307g0050 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1149.8 969 62.3
Prupe.2G192700 Prunus persica HOM05D006425 ORTHO05D007312 0.0e+00 1127.9 754 74.7
Actinidia07981 Actinidia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1105.1 1079 57.3
Gohir.A12G113700 Gossypium hirsutum HOM05D006425 ORTHO05D007312 3.2e-297 1025.4 719 71.5
EL10Ac1g00230 Beta vulgaris HOM05D006425 ORTHO05D007312 1.9e-294 1016.1 755 67.3
BcaC07g42431 Brassica carinata HOM05D006425 ORTHO05D007312 2.7e-288 995.7 537 93.1
Mapoly0065s0064 Marchantia polymorpha HOM05D006425 ORTHO05D007312 1.5e-283 979.9 1085 48.9
Pp3c27_4880 Physcomitrium patens HOM05D006425 ORTHO05D007312 6.0e-272 941.4 1077 47.8
Actinidia20260 Actinidia chinensis HOM05D006425 ORTHO05D007312 3.7e-261 905.6 1015 52.8
BcaC07g42430 Brassica carinata HOM05D006425 ORTHO05D007312 1.1e-257 894.0 516 86.8
Sopen01g039900 Solanum pennellii HOM05D006425 ORTHO05D007312 1.6e-240 837.0 618 67.2
SEGI_19319 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 3.7e-237 825.9 780 56.9
AagrBONN_evm.TU.Sc2ySwM_368.2372 Anthoceros agrestis HOM05D006425 ORTHO05D007312 6.1e-232 808.5 1017 45.1
Sed0002059 Sechium edule HOM05D006425 ORTHO05D007312 1.9e-196 690.6 652 57.7
CBR_g42133 Chara braunii HOM05D006425 ORTHO05D007312 7.8e-195 685.3 1511 32.6
Sopen01g039890 Solanum pennellii HOM05D006425 ORTHO05D007312 8.7e-162 575.5 396 73.7
Gohir.A12G113750 Gossypium hirsutum HOM05D006425 ORTHO05D007312 5.1e-130 469.9 341 68.6
Hma1.2p1_0180F.1_g079620 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 1.9e-76 292.0 191 73.8
MD01G1085000 Malus domestica HOM05D006425 ORTHO05D007312 3.1e-50 204.9 140 72.1
Hma1.2p1_0180F.1_g079630 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 8.1e-43 180.3 131 70.2
SEGI_38786 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 7.2e-23 114.0 59 83.1
Actinidia20216 Actinidia chinensis HOM05D006425 ORTHO05D007312 1.1e-18 100.1 63 73.0
VMungo0720G2246 Vigna mungo HOM05D006425 ORTHO05D007312 1.5e-12 79.7 65 56.9
SEGI_36326 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 2.2e-11 75.9 90 45.6
MCO11G284 Micromonas commoda HOM05D006425 ORTHO05D007312 7.0e-10 70.9 199 28.1
CSS0018706 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 2.6e-09 68.9 46 60.9
CSS0027474 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 2.6e-09 68.9 46 60.9
CSS0040683 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 2.7e-06 58.9 40 62.5


User provided reference genes

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