Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g034700 Solanum pennellii HOM05D008172 ORTHO05D007977 9.2e-41 171.8 123 100.0
Solyc12g100110.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.5e-30 137.9 88 83.0
Sopen12g034730 Solanum pennellii HOM05D008172 ORTHO05D007977 1.5e-30 137.9 87 81.6
Solyc12g100080.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 4.3e-30 136.3 123 87.0
PGSC0003DMG400023862 Solanum tuberosum HOM05D008172 ORTHO05D007977 3.1e-28 130.2 92 79.3
Solyc12g100090.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.5e-27 127.9 90 76.7
Sopen12g023640 Solanum pennellii HOM05D008172 ORTHO05D007977 3.7e-26 123.2 93 75.3
Solyc12g049170.2 Solanum lycopersicum HOM05D008172 ORTHO05D007977 6.4e-26 122.5 93 74.2
Solyc12g049070.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.1e-25 121.7 93 73.1
Sopen12g023610 Solanum pennellii HOM05D008172 ORTHO05D007977 1.4e-25 121.3 93 74.2
Sopen12g034720 Solanum pennellii HOM05D008172 ORTHO05D007977 4.1e-25 119.8 81 81.5
PGSC0003DMG400011614 Solanum tuberosum HOM05D008172 ORTHO05D007977 5.4e-25 119.4 92 75.0
Solyc12g049040.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.6e-24 117.9 92 72.8
Sopen12g023460 Solanum pennellii HOM05D008172 ORTHO05D007977 1.6e-24 117.9 93 72.0
Solyc12g049160.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.7e-24 117.1 93 72.0
PGSC0003DMG400023859 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.3e-23 114.0 87 72.4
Solyc12g049050.2 Solanum lycopersicum HOM05D008172 ORTHO05D007977 3.0e-23 113.6 93 71.0
Sopen12g023620 Solanum pennellii HOM05D008172 ORTHO05D007977 1.1e-22 111.7 89 71.9
PGSC0003DMG400023861 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.5e-22 110.5 82 76.8
Solyc12g049180.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 5.6e-22 109.4 92 70.7
PGSC0003DMG400023858 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.2e-21 108.2 83 73.5
Sopen12g023590 Solanum pennellii HOM05D008172 ORTHO05D007977 2.1e-21 107.5 94 68.1
Sopen12g023630 Solanum pennellii HOM05D008172 ORTHO05D007977 2.1e-21 107.5 87 71.3
Sopen12g023470 Solanum pennellii HOM05D008172 ORTHO05D007977 3.6e-21 106.7 93 67.7
Solyc12g049140.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 4.7e-21 106.3 93 67.7
PGSC0003DMG400011615 Solanum tuberosum HOM05D008172 ORTHO05D007977 4.7e-21 106.3 89 71.9
PGSC0003DMG400023857 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.3e-18 98.2 79 65.8
Solyc12g038170.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 8.4e-18 95.5 83 65.1
Solyc12g049090.3 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.1e-17 95.1 93 64.5
Sopen12g023600 Solanum pennellii HOM05D008172 ORTHO05D007977 1.1e-17 95.1 93 61.3
PGSC0003DMG400011599 Solanum tuberosum HOM05D008172 ORTHO05D007977 5.4e-17 92.8 89 64.0
Solyc12g049150.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 9.2e-17 92.0 93 60.2
Solyc12g100100.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.6e-16 91.3 68 76.5
Sopen12g034710 Solanum pennellii HOM05D008172 ORTHO05D007977 2.7e-16 90.5 79 70.9
Solyc12g038240.3 Solanum lycopersicum HOM05D008172 ORTHO05D007977 4.3e-14 83.2 90 60.0
PGSC0003DMG400011600 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.2e-13 81.6 88 62.5
PGSC0003DMG400006488 Solanum tuberosum HOM05D008172 ORTHO05D007977 3.6e-13 80.1 92 54.3
Sopen12g023450 Solanum pennellii HOM05D008172 ORTHO05D007977 1.1e-12 78.6 101 57.4
Sopen12g023480 Solanum pennellii HOM05D008172 ORTHO05D007977 1.4e-12 78.2 68 69.1
Sopen12g034740 Solanum pennellii HOM05D008172 ORTHO05D007977 6.9e-12 75.9 92 55.4
PGSC0003DMG400023855 Solanum tuberosum HOM05D008172 ORTHO05D007977 9.0e-12 75.5 113 48.7
Sopen12g017900 Solanum pennellii HOM05D000002 ORTHO05D007977 2.6e-11 73.9 51 74.5
PGSC0003DMG400006490 Solanum tuberosum HOM05D008172 ORTHO05D007977 7.6e-11 72.4 67 64.2
Sopen12g022950 Solanum pennellii HOM05D008172 ORTHO05D007977 6.4e-10 69.3 63 66.7
Sopen12g022960 Solanum pennellii HOM05D008172 ORTHO05D007977 1.9e-09 67.8 68 58.8
Sopen12g022940 Solanum pennellii HOM05D008172 ORTHO05D007977 3.2e-09 67.0 74 59.5
Solyc12g044710.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 5.4e-09 66.2 93 47.3
PGSC0003DMG400023856 Solanum tuberosum HOM05D008172 ORTHO05D007977 9.3e-09 65.5 53 71.7
CAN.G575.61 Capsicum annuum HOM05D008172 ORTHO05D007977 3.5e-08 63.5 73 60.3
Sopen12g018240 Solanum pennellii HOM05D008172 ORTHO05D007977 1.0e-07 62.0 63 61.9
PGSC0003DMG400006489 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.7e-07 61.2 68 54.4
Sopen12g017410 Solanum pennellii HOM05D008172 ORTHO05D007977 8.7e-07 58.9 53 66.0
Nitab4.5_0000508g0080 Nicotiana tabacum HOM05D008172 ORTHO05D007977 5.6e-06 56.2 60 56.7


User provided reference genes

Program Settings