Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g034470 Solanum pennellii HOM05D007410 ORTHO05D009500 2.1e-112 411.0 788 100.0
Solyc12g099840.1 Solanum lycopersicum HOM05D007410 ORTHO05D009500 3.3e-102 377.1 787 98.1
PGSC0003DMG400004719 Solanum tuberosum HOM05D007410 ORTHO05D009500 5.3e-92 343.2 199 88.9
Nitab4.5_0026813g0010 Nicotiana tabacum HOM05D007410 ORTHO05D009500 9.4e-65 252.7 181 72.9
Nitab4.5_0001290g0100 Nicotiana tabacum HOM05D007410 ORTHO05D009500 9.8e-62 242.7 181 71.3
Nitab4.5_0005621g0120 Nicotiana tabacum HOM05D007410 ORTHO05D009500 5.9e-59 233.4 182 68.7
Peaxi162Scf00802g00013 Petunia axillaris HOM05D007410 ORTHO05D009500 9.8e-54 216.1 147 75.5
CAN.G575.91 Capsicum annuum HOM05D007410 ORTHO05D009500 3.2e-44 184.5 187 57.8
Oeu058028.1 Olea europaea HOM05D007410 ORTHO05D009500 1.2e-32 146.0 132 59.1
Oeu023854.1 Olea europaea HOM05D007410 ORTHO05D009500 4.0e-31 141.0 176 47.7
SGA_v2.0_scaffold75G24801 Striga asiatica HOM05D007410 ORTHO05D009500 8.3e-29 133.3 149 51.0
Cc06_g05130 Coffea canephora HOM05D007410 ORTHO05D009500 7.1e-28 130.2 172 48.3
Migut.J00989 Erythranthe guttata HOM05D007410 ORTHO05D009500 1.2e-27 129.4 158 50.6
MD12G1016300 Malus domestica HOM05D007410 ORTHO05D009500 3.9e-26 124.4 173 44.5
MD14G1014400 Malus domestica HOM05D007410 ORTHO05D009500 6.6e-26 123.6 173 44.5
Dinv34010 Davidia involucrata HOM05D007410 ORTHO05D009500 9.5e-25 119.8 166 47.6
QL02p025248 Quercus lobata HOM05D007410 ORTHO05D009500 1.2e-24 119.4 163 42.3
RcHm_v2.0_Chr3g0471971 Rosa chinensis HOM05D007410 ORTHO05D009500 8.1e-24 116.7 158 45.6
DCAR_020784 Daucus carota HOM05D007410 ORTHO05D009500 1.1e-23 116.3 148 46.6
Cfa016527 Carpinus fangiana HOM05D007410 ORTHO05D009500 4.0e-23 114.4 183 37.7
SGA_v2.0_scaffold40G15416 Striga asiatica HOM05D007410 ORTHO05D009500 4.4e-22 110.9 139 46.0
Prupe.7G119000 Prunus persica HOM05D007410 ORTHO05D009500 5.8e-22 110.5 176 40.9
TWI60G0552 Tripterygium wilfordii HOM05D007410 ORTHO05D009500 5.8e-22 110.5 160 40.0
Dinv39608 Davidia involucrata HOM05D007410 ORTHO05D009500 2.2e-21 108.6 148 70.9
CSS0026121 Camellia sinensis var. sinensis HOM05D007410 ORTHO05D009500 8.4e-21 106.7 148 71.6
FAN02G1401 Fragaria x ananassa HOM05D007410 ORTHO05D009500 8.4e-21 106.7 170 41.2
DCAR_013956 Daucus carota HOM05D007410 ORTHO05D009500 1.1e-20 106.3 157 42.7
FAN14G2442 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.4e-20 105.9 171 41.5
HanXRQChr17g0535541 Helianthus annuus HOM05D007410 ORTHO05D009500 1.4e-20 105.9 166 41.0
Haze_19526 Corylus avellana HOM05D007410 ORTHO05D009500 2.4e-20 105.1 171 37.4
FvH4_6g17750 Fragaria vesca HOM05D007410 ORTHO05D009500 4.1e-20 104.4 171 40.9
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 9.2e-20 103.2 179 37.4
HanXRQChr17g0534281 Helianthus annuus HOM05D007410 ORTHO05D009500 9.2e-20 103.2 166 38.6
FAN09G1720 Fragaria x ananassa HOM05D007410 ORTHO05D009500 2.1e-19 102.1 151 42.4
Eucgr.A01557 Eucalyptus grandis HOM05D007410 ORTHO05D009500 2.7e-19 101.7 148 38.5
Aa31LG3G15130 Aethionema arabicum HOM05D007410 ORTHO05D009500 3.5e-19 101.3 170 35.3
A10p25700 Brassica napus HOM05D007410 ORTHO05D009500 3.5e-19 101.3 173 34.7
BraA10t44635Z Brassica rapa HOM05D007410 ORTHO05D009500 3.5e-19 101.3 173 35.3
Sp6g31520 Schrenkiella parvula HOM05D007410 ORTHO05D009500 4.6e-19 100.9 190 35.3
AT5G12100 Arabidopsis thaliana HOM05D007410 ORTHO05D009500 3.0e-18 98.2 163 38.7
Carub.0006s1061 Capsella rubella HOM05D007410 ORTHO05D009500 3.0e-18 98.2 171 35.1
FAN05G1927 Fragaria x ananassa HOM05D007410 ORTHO05D009500 2.5e-17 95.1 174 38.5
Hma1.2p1_0084F.1_g043130 Hydrangea macrophylla HOM05D007410 ORTHO05D009500 2.5e-17 95.1 121 50.4
BolC9t59308H Brassica oleracea HOM05D007410 ORTHO05D009500 9.6e-17 93.2 174 33.9
Atru.BG.129.p Acer truncatum HOM05D007410 ORTHO05D009500 1.6e-16 92.4 127 43.3
C09p64770 Brassica napus HOM05D007410 ORTHO05D009500 3.6e-16 91.3 153 35.3
BcaNung06328 Brassica carinata HOM05D007410 ORTHO05D009500 6.2e-16 90.5 195 35.9
Rhsim03G0082200 Rhododendron simsii HOM05D007410 ORTHO05D009500 6.2e-16 90.5 151 40.4
MELO3C006839.2 Cucumis melo HOM05D007410 ORTHO05D009500 3.1e-15 88.2 175 33.7
Lalb_Chr01g0018371 Lupinus albus HOM05D007410 ORTHO05D009500 4.0e-15 87.8 148 68.2
Potri.010G249800 Populus trichocarpa HOM05D007410 ORTHO05D009500 4.0e-15 87.8 184 32.1
VMungo1383G0444 Vigna mungo HOM05D007410 ORTHO05D009500 4.0e-15 87.8 146 35.6
TAR365G0607 Trochodendron aralioides HOM05D007410 ORTHO05D009500 5.2e-15 87.4 141 38.3
ClCG05G007520 Citrullus lanatus HOM05D007410 ORTHO05D009500 1.5e-14 85.9 161 32.9
Atru.chr12.1036 Acer truncatum HOM05D007410 ORTHO05D009500 7.6e-14 83.6 93 41.9
CsaV3_3G016400 Cucumis sativus L. HOM05D007410 ORTHO05D009500 7.6e-14 83.6 176 35.8
Phvul.001G185900 Phaseolus vulgaris HOM05D007410 ORTHO05D009500 9.9e-14 83.2 145 34.5
CARHR201020 Cardamine hirsuta HOM05D007410 ORTHO05D009500 1.7e-13 82.4 153 35.9
FAN09G0790 Fragaria x ananassa HOM05D007410 ORTHO05D009500 2.9e-13 81.6 148 66.9
Sabra10G0194300 Salix brachista HOM05D001909 ORTHO05D007079 2.9e-13 81.6 148 68.2
Glyma.03G190300 Glycine max HOM05D007410 ORTHO05D009500 3.8e-13 81.3 159 34.0
Sed0018174 Sechium edule HOM05D007410 ORTHO05D009500 4.9e-13 80.9 178 34.3
Nn8g39918 Nelumbo nucifera HOM05D007410 ORTHO05D009500 6.4e-13 80.5 122 41.0
CANSAT80G0494 Cannabis sativa HOM05D007410 ORTHO05D009500 1.1e-12 79.7 148 67.6
EL10Ac1g00861 Beta vulgaris HOM05D007410 ORTHO05D009500 1.9e-12 79.0 148 40.5
Lj1g0017625 Lotus japonicus HOM05D007410 ORTHO05D009500 1.9e-12 79.0 148 68.9
Glyma.19G190733 Glycine max HOM05D007410 ORTHO05D009500 3.2e-12 78.2 148 66.2
Psat2g007640 Pisum sativum HOM05D007410 ORTHO05D009500 3.2e-12 78.2 148 66.2
Sc18g0006010 Simmondsia chinensis HOM05D007410 ORTHO05D009500 2.7e-11 75.1 149 38.3
Thhalv10015810m.g Eutrema salsugineum HOM05D007410 ORTHO05D009500 4.6e-11 74.3 97 35.1
Ca_08961_v3 Cicer arietinum L. HOM05D007410 ORTHO05D009500 6.0e-11 73.9 146 67.1
Glyma.19G190667 Glycine max HOM05D007410 ORTHO05D009500 6.0e-11 73.9 118 37.3
Medtr7g103600 Medicago truncatula HOM05D007410 ORTHO05D009500 1.3e-10 72.8 148 64.9
Actinidia39878 Actinidia chinensis HOM05D007410 ORTHO05D009500 3.9e-10 71.2 57 59.6
Duzib093G0520 Durio zibethinus HOM05D007410 ORTHO05D009500 1.9e-09 68.9 148 65.5
Lj9E304T4 Lonicera japonica HOM05D007410 ORTHO05D009500 1.9e-09 68.9 114 36.0
TPR.G28359 Trifolium pratense HOM05D007410 ORTHO05D009500 2.5e-09 68.6 148 64.2
Atru.chr12.1030 Acer truncatum HOM05D007410 ORTHO05D009500 4.3e-09 67.8 95 43.2
PGR004G1775 Punica granatum HOM05D007410 ORTHO05D009500 1.3e-08 66.2 118 34.7
CDE01G0670 Ceratophyllum demersum HOM05D003192 ORTHO05D003596 2.1e-08 65.5 161 32.3
Manes.09G058000 Manihot esculenta HOM05D007410 ORTHO05D009500 4.8e-08 64.3 146 63.0
AUR62004183 Chenopodium quinoa HOM05D007410 ORTHO05D009500 6.2e-08 63.9 138 31.2
Gohir.D01G198900 Gossypium hirsutum HOM05D007410 ORTHO05D009500 6.2e-08 63.9 96 39.6
Gorai.002G243300 Gossypium raimondii HOM05D007410 ORTHO05D009500 6.2e-08 63.9 96 39.6
AUR62013683 Chenopodium quinoa HOM05D007410 ORTHO05D009500 8.1e-08 63.5 148 64.9
Gohir.A01G210000 Gossypium hirsutum HOM05D007410 ORTHO05D009500 1.4e-07 62.8 99 38.4
AL6G44470 Arabidopsis lyrata HOM05D007410 ORTHO05D009500 1.8e-07 62.4 87 32.2
HanXRQChr02g0058171 Helianthus annuus HOM05D007410 ORTHO05D009500 2.4e-07 62.0 132 61.4
CiPaw.09G007900 Carya illinoinensis HOM05D007410 ORTHO05D009500 3.1e-07 61.6 114 39.5
Ciclev10033972m.g Citrus clementina HOM05D007410 ORTHO05D009500 2.6e-06 58.5 46 52.2
ECA233G1087 Erigeron canadensis HOM05D001398 ORTHO05D001467 7.6e-06 57.0 57 52.6


User provided reference genes

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