Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 3.5e-152 541.6 272 100.0
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 1.9e-142 509.2 263 96.6
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 2.4e-140 502.3 264 94.7
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 7.4e-118 427.6 267 81.6
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 4.1e-116 421.8 267 82.4
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 3.4e-115 418.7 267 81.3
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 7.0e-92 341.3 279 68.5
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 1.7e-90 336.7 264 67.4
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 1.1e-89 334.0 277 67.1
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 9.4e-89 330.9 267 63.7
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 1.8e-87 326.6 271 64.9
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 2.3e-87 326.2 267 65.2
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 5.2e-87 325.1 279 62.7
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 1.1e-86 323.9 279 62.4
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 1.1e-86 323.9 270 64.8
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 1.5e-86 323.6 285 62.8
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 5.7e-86 321.6 269 63.2
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 7.5e-86 321.2 191 81.7
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 7.5e-86 321.2 247 68.0
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 9.7e-86 320.9 247 68.0
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 9.7e-86 320.9 247 68.0
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 9.7e-86 320.9 247 68.0
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 3.7e-85 318.9 268 63.4
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 8.2e-85 317.8 214 73.8
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 1.1e-84 317.4 270 64.4
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 2.4e-84 316.2 265 62.3
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 2.4e-84 316.2 198 76.3
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 5.3e-84 315.1 247 66.8
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 5.3e-84 315.1 247 66.8
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 9.1e-84 314.3 192 78.6
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 1.2e-83 313.9 265 62.6
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 2.0e-83 313.2 190 78.9
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 3.5e-83 312.4 191 78.5
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 4.5e-83 312.0 264 61.7
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 5.9e-83 311.6 258 66.3
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 5.9e-83 311.6 271 64.6
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 5.9e-83 311.6 273 62.3
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 5.9e-83 311.6 242 67.8
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 5.9e-83 311.6 199 75.9
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 5.9e-83 311.6 198 77.3
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 7.7e-83 311.2 264 61.7
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 7.7e-83 311.2 265 62.3
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 7.7e-83 311.2 269 62.8
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 1.0e-82 310.8 192 79.2
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 1.0e-82 310.8 264 64.0
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 1.3e-82 310.5 266 62.4
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 1.3e-82 310.5 264 62.1
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 1.3e-82 310.5 192 78.1
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 1.7e-82 310.1 254 65.4
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 1.7e-82 310.1 266 61.7
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 1.7e-82 310.1 272 61.8
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 2.2e-82 309.7 210 72.4
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 2.2e-82 309.7 266 62.8
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 2.9e-82 309.3 213 71.4
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 2.9e-82 309.3 247 64.4
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 2.9e-82 309.3 257 63.0
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 5.0e-82 308.5 256 64.5
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 5.0e-82 308.5 262 64.9
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 5.0e-82 308.5 262 65.3
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 8.5e-82 307.8 282 61.0
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 8.5e-82 307.8 184 80.4
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 1.1e-81 307.4 268 61.9
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 1.9e-81 306.6 263 61.6
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 1.9e-81 306.6 275 60.4
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 2.5e-81 306.2 198 74.7
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 3.2e-81 305.8 185 78.9
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 7.2e-81 304.7 263 61.2
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 7.2e-81 304.7 198 72.7
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 9.4e-81 304.3 263 60.5
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 1.2e-80 303.9 264 61.7
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 1.2e-80 303.9 256 62.5
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 1.6e-80 303.5 267 62.9
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 2.1e-80 303.1 263 60.8
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 2.1e-80 303.1 263 59.7
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 6.1e-80 301.6 280 60.0
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 1.8e-79 300.1 275 60.7
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 1.8e-79 300.1 263 60.5
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 3.0e-79 299.3 252 62.7
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 5.2e-79 298.5 191 75.4
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 6.8e-79 298.1 262 61.1
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 8.8e-79 297.7 205 69.3
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 8.8e-79 297.7 261 64.0
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 8.8e-79 297.7 260 62.3
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 2.6e-78 296.2 188 75.0
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 5.7e-78 295.0 276 58.7
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 7.5e-78 294.7 184 75.0
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 3.7e-77 292.4 268 58.2
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 6.3e-77 291.6 263 59.7
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 6.3e-77 291.6 194 72.7
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 1.1e-76 290.8 266 57.9
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 1.1e-76 290.8 274 59.5
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 1.8e-76 290.0 185 71.9
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 4.1e-76 288.9 205 69.3
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 5.4e-76 288.5 187 74.9
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 9.1e-76 287.7 295 56.6
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 3.5e-75 285.8 203 65.5
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 4.5e-75 285.4 198 67.2
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 1.0e-74 284.3 317 53.3
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 4.2e-73 278.9 280 54.6
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 6.1e-72 275.0 201 66.7
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 4.4e-70 268.9 229 62.4
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 2.2e-69 266.5 187 64.7
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 1.4e-68 263.8 262 54.2
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 3.1e-68 262.7 184 66.3
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.2e-67 260.8 195 63.6
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 3.5e-67 259.2 195 63.1
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 7.7e-67 258.1 327 48.6
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 3.8e-66 255.8 264 54.2
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 1.1e-65 254.2 186 65.1
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 4.0e-63 245.7 272 53.3
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 8.3e-61 238.0 183 61.7
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 6.8e-55 218.4 122 86.1
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 8.6e-42 174.9 333 39.0
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 3.8e-37 159.5 131 63.4
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 6.2e-32 142.1 75 85.3
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 7.1e-28 128.6 107 59.8
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 7.8e-27 125.2 164 49.4
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 3.6e-24 116.3 148 52.0
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 8.1e-24 115.2 152 51.3
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 1.3e-21 107.8 94 56.4
Oeu018839.1 Olea europaea HOM05D006606 ORTHO05D289568 6.9e-07 58.9 41 65.9


User provided reference genes

Program Settings