Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g032850 Solanum pennellii HOM05D005842 ORTHO05D007077 2.6e-36 154.8 77 100.0
Solyc12g097050.2 Solanum lycopersicum HOM05D005842 ORTHO05D007077 7.6e-36 153.3 77 98.7
PGSC0003DMG400008623 Solanum tuberosum HOM05D005842 ORTHO05D007077 1.6e-30 135.6 77 88.3
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 1.3e-14 82.8 85 52.9
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 4.8e-14 80.9 86 50.0
Peaxi162Scf00164g00112 Petunia axillaris HOM05D005842 ORTHO05D007077 4.1e-13 77.8 68 58.8
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 1.7e-11 72.4 73 53.4
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 5.5e-10 67.4 82 46.3
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.2e-09 66.2 82 46.3
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 2.7e-09 65.1 79 45.6
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 2.7e-09 65.1 86 44.2
Peaxi162Scf01007g00004 Petunia axillaris HOM05D005842 ORTHO05D007077 4.6e-09 64.3 95 43.2
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 6.1e-09 63.9 86 44.2
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 1.0e-08 63.2 78 44.9
Sopen09g034020 Solanum pennellii HOM05D005842 ORTHO05D007077 1.4e-08 62.8 86 45.3
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.8e-08 62.4 82 45.1
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 1.8e-08 62.4 78 44.9
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 1.8e-08 62.4 78 44.9
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 1.8e-08 62.4 78 44.9
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 1.8e-08 62.4 78 44.9
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 1.8e-08 62.4 78 44.9
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 1.8e-08 62.4 78 44.9
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 1.8e-08 62.4 78 44.9
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 1.8e-08 62.4 78 44.9
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 2.3e-08 62.0 82 41.5
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 3.9e-08 61.2 82 45.1
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 3.9e-08 61.2 86 41.9
Atru.chr13.2235 Acer truncatum HOM05D005842 ORTHO05D007077 6.7e-08 60.5 59 50.8
Solyc09g091040.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 6.7e-08 60.5 86 44.2
Oeu007544.1 Olea europaea HOM05D005842 ORTHO05D007077 1.1e-07 59.7 61 49.2
PGSC0003DMG404001548 Solanum tuberosum HOM05D005842 ORTHO05D007077 1.5e-07 59.3 72 47.2
Rhsim09G0044300 Rhododendron simsii HOM05D005842 ORTHO05D007077 2.6e-07 58.5 44 56.8
HPP92_007287 Vanilla planifolia HOM05D005842 ORTHO05D007077 4.4e-07 57.8 51 51.0
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 9.7e-07 56.6 64 46.9
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 9.7e-07 56.6 60 46.7
Sopen05g031940 Solanum pennellii HOM05D005842 ORTHO05D007077 9.7e-07 56.6 91 38.5
ClCG06G007420 Citrullus lanatus HOM05D005842 ORTHO05D007077 2.2e-06 55.5 43 60.5
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 2.2e-06 55.5 73 38.4
Nitab4.5_0000867g0010 Nicotiana tabacum HOM05D000404 ORTHO05D001765 2.8e-06 55.1 90 42.2
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 2.8e-06 55.1 78 39.7
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 4.8e-06 54.3 78 38.5
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 4.8e-06 54.3 49 55.1
Sed0010218 Sechium edule HOM05D005842 ORTHO05D007077 6.3e-06 53.9 41 56.1
Peaxi162Scf00125g01021 Petunia axillaris HOM05D005842 ORTHO05D007077 8.2e-06 53.5 31 77.4


User provided reference genes

Program Settings