Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 6.6e-151 537.3 271 100.0
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 1.9e-137 492.7 271 90.8
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 7.8e-136 487.3 250 98.8
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 5.1e-135 484.6 250 98.4
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 5.1e-119 431.4 250 84.8
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 5.1e-111 404.8 268 78.0
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 3.8e-106 388.7 349 63.0
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 8.5e-98 360.9 257 70.8
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 1.4e-95 353.6 250 68.0
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 3.0e-95 352.4 269 66.5
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 8.2e-93 344.4 252 65.1
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 2.4e-92 342.8 271 62.7
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 2.6e-91 339.3 257 66.1
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 1.9e-89 333.2 252 66.3
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 9.4e-89 330.9 249 66.7
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 1.0e-87 327.4 257 65.4
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 3.0e-87 325.9 236 69.1
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 1.3e-85 320.5 257 63.8
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 7.0e-84 314.7 234 65.4
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 9.1e-84 314.3 253 63.6
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 1.2e-83 313.9 248 62.5
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 2.6e-83 312.8 258 63.2
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 2.6e-83 312.8 253 63.2
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 4.5e-83 312.0 258 63.2
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 1.3e-82 310.5 261 62.5
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 2.2e-82 309.7 258 60.9
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 5.0e-82 308.5 272 58.8
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 5.0e-82 308.5 255 61.2
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 8.5e-82 307.8 252 64.7
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 8.5e-82 307.8 250 61.6
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 1.9e-81 306.6 248 62.1
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 1.9e-81 306.6 268 59.3
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 2.5e-81 306.2 257 60.3
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 2.5e-81 306.2 250 60.4
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 2.1e-80 303.1 255 60.4
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 2.1e-80 303.1 258 61.2
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 8.0e-80 301.2 259 61.0
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 2.3e-79 299.7 257 60.3
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 2.3e-79 299.7 270 56.3
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 3.0e-79 299.3 241 63.5
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 6.7e-79 298.1 256 59.8
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 1.5e-78 297.0 267 58.8
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 1.5e-78 297.0 248 60.9
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 1.5e-78 297.0 256 59.4
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 3.3e-78 295.8 259 59.5
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 4.4e-78 295.4 248 60.5
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 1.3e-77 293.9 253 58.1
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 2.8e-77 292.7 251 60.2
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 5.3e-76 288.5 257 59.5
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 9.1e-76 287.7 251 58.6
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 2.0e-75 286.6 248 58.1
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 3.5e-75 285.8 230 64.3
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 4.5e-75 285.4 264 57.6
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 5.9e-75 285.0 250 57.2
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 1.3e-74 283.9 252 56.7
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 2.2e-74 283.1 232 62.9
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 2.9e-74 282.7 262 56.1
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 2.9e-74 282.7 250 58.4
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 1.1e-73 280.8 252 54.8
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 1.1e-73 280.8 248 60.5
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 1.5e-73 280.4 258 53.5
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 5.5e-73 278.5 252 57.5
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 1.2e-72 277.3 250 54.4
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 1.6e-72 276.9 251 57.8
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 2.1e-72 276.6 229 59.4
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 2.1e-72 276.6 262 54.2
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 2.7e-72 276.2 248 57.7
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 2.3e-71 273.1 253 53.8
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 2.3e-71 273.1 253 54.5
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 4.0e-71 272.3 292 52.7
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 6.7e-71 271.6 250 54.0
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 8.8e-71 271.2 272 51.1
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 1.5e-70 270.4 253 53.0
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 1.5e-70 270.4 266 55.6
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 2.0e-70 270.0 272 50.7
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 2.6e-70 269.6 274 50.0
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 2.6e-70 269.6 247 55.1
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 7.5e-70 268.1 248 56.5
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 1.7e-69 266.9 272 49.6
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 1.7e-69 266.9 272 49.6
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 1.7e-69 266.9 243 56.4
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 3.7e-69 265.8 246 54.5
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 4.8e-69 265.4 271 55.0
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 8.2e-69 264.6 245 55.1
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 8.2e-69 264.6 245 55.1
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 1.4e-68 263.8 210 63.3
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 3.1e-68 262.7 248 58.5
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 5.3e-68 261.9 248 58.1
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 6.5e-66 255.0 270 48.5
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 6.5e-66 255.0 245 54.7
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 3.2e-65 252.7 240 56.2
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 4.2e-65 252.3 206 62.6
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 1.1e-60 237.7 232 54.7
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 2.4e-60 236.5 214 53.3
BcaB08g37036 Brassica carinata HOM05D006609 ORTHO05D008551 3.5e-59 232.6 252 50.0
AT5G11640 Arabidopsis thaliana HOM05D006609 ORTHO05D008551 2.3e-58 229.9 191 58.6
DCAR_000757 Daucus carota HOM05D006609 ORTHO05D010582 2.8e-53 213.0 244 48.4
AUR62009264 Chenopodium quinoa HOM05D006609 ORTHO05D008551 1.7e-50 203.8 169 59.8
Cpa.g.sc78.16 Carica papaya HOM05D006609 ORTHO05D008551 2.5e-49 199.9 224 52.2
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 9.8e-46 188.0 166 57.8
BcaNung02663 Brassica carinata HOM05D006609 ORTHO05D008551 1.6e-43 180.6 151 59.6
unitig_93.g30708 Utricularia gibba HOM05D006609 ORTHO05D008551 1.7e-42 177.2 244 44.3
ECA233G1748 Erigeron canadensis HOM05D006609 ORTHO05D008551 1.2e-40 171.0 136 64.7
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 1.1e-36 157.9 161 52.8
vmacro11054 Vaccinium macrocarpon HOM05D006609 ORTHO05D008551 1.3e-34 151.0 109 67.9
FAN24G0356 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.6e-30 136.7 116 61.2
FAN24G3337 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.6e-30 136.7 116 61.2
EL10Ac2g04002 Beta vulgaris HOM05D006609 ORTHO05D008551 2.0e-22 110.5 213 34.7
HanXRQChr16g0519661 Helianthus annuus HOM05D006609 ORTHO05D008551 2.2e-21 107.1 128 49.2
SEGI_38144 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 2.1e-19 100.5 107 53.3
SMO144G0045 Selaginella moellendorffii HOM05D006609 ORTHO05D008551 8.7e-18 95.1 154 35.1
QL09p008974 Quercus lobata HOM05D006609 ORTHO05D008551 1.5e-17 94.4 62 72.6
PRCOL_00006038 Prasinoderma coloniale HOM05D006609 ORTHO05D008551 3.3e-17 93.2 186 28.5
FAN24G1965 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.2e-14 84.7 77 59.7
SEGI_39152 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 2.0e-14 84.0 102 40.2
Cre10.g426400 Chlamydomonas reinhardtii HOM05D006609 ORTHO05D008551 9.3e-12 75.1 255 25.9
Haze_26101 Corylus avellana HOM05D006609 ORTHO05D008551 1.6e-08 64.3 129 34.1
arahy.Tifrunner.gnm1.ann1.WH0W9H Arachis hypogaea HOM05D006609 ORTHO05D008551 6.9e-07 58.9 43 65.1


User provided reference genes

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