Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g030640 Solanum pennellii HOM05D000296 ORTHO05D051314 3.0e-44 181.4 88 100.0
Sopen09g001580 Solanum pennellii HOM05D000296 ORTHO05D000175 9.6e-43 176.4 88 98.9
Solyc09g005690.3 Solanum lycopersicum HOM05D000296 ORTHO05D000175 1.6e-42 175.6 88 97.7
PGSC0003DMG400023923 Solanum tuberosum HOM05D000296 ORTHO05D000175 3.4e-40 167.9 91 91.2
Peaxi162Scf00039g01012 Petunia axillaris HOM05D000296 ORTHO05D000175 6.2e-26 120.6 95 67.4
Dinv35645 Davidia involucrata HOM05D000296 ORTHO05D000175 4.8e-18 94.4 79 58.2
PGR004G1614 Punica granatum HOM05D000296 ORTHO05D000175 6.9e-17 90.5 80 60.0
Actinidia19760 Actinidia chinensis HOM05D000296 ORTHO05D000175 1.2e-16 89.7 79 59.5
Thecc.05G045400 Theobroma cacao HOM05D000296 ORTHO05D000175 5.0e-15 84.3 96 50.0
Migut.J00370 Erythranthe guttata HOM05D000296 ORTHO05D000175 6.5e-15 84.0 78 55.1
Cc06_g03050 Coffea canephora HOM05D000296 ORTHO05D000175 8.5e-15 83.6 72 55.6
Oeu049201.1 Olea europaea HOM05D000296 ORTHO05D000175 1.1e-14 83.2 78 52.6
Gohir.D04G118800 Gossypium hirsutum HOM05D000296 ORTHO05D000175 1.9e-14 82.4 88 50.0
Duzib093G1263 Durio zibethinus HOM05D000296 ORTHO05D000175 2.5e-14 82.0 79 51.9
Lj2C100G19 Lonicera japonica HOM05D000296 ORTHO05D000175 2.5e-14 82.0 89 50.6
Rhsim05G0187500 Rhododendron simsii HOM05D000296 ORTHO05D000175 3.2e-14 81.6 80 52.5
Gorai.009G424000 Gossypium raimondii HOM05D000296 ORTHO05D000175 4.2e-14 81.3 88 48.9
Cpa.g.sc163.27 Carica papaya HOM05D000296 ORTHO05D000175 5.5e-14 80.9 79 51.9
Dinv37212 Davidia involucrata HOM05D000296 ORTHO05D000175 9.4e-14 80.1 68 58.8
TAR623G0188 Trochodendron aralioides HOM05D000296 ORTHO05D000175 1.2e-13 79.7 79 48.1
Migut.L01623 Erythranthe guttata HOM05D000296 ORTHO05D000175 4.6e-13 77.8 89 48.3
GSVIVG01025614001 Vitis vinifera HOM05D000296 ORTHO05D000175 6.1e-13 77.4 86 46.5
QL07p046807 Quercus lobata HOM05D000296 ORTHO05D000175 7.9e-13 77.0 93 50.5
QL07p047012 Quercus lobata HOM05D000296 ORTHO05D000175 7.9e-13 77.0 92 50.0
MSTRG.19108 Avicennia marina HOM05D000296 ORTHO05D000175 1.0e-12 76.6 76 57.9
Glyma.19G173900 Glycine max HOM05D000296 ORTHO05D000175 1.4e-12 76.3 78 50.0
arahy.Tifrunner.gnm1.ann1.DWP65P Arachis hypogaea HOM05D000296 ORTHO05D000175 3.9e-12 74.7 76 48.7
arahy.Tifrunner.gnm1.ann1.NX02M0 Arachis hypogaea HOM05D000296 ORTHO05D000175 3.9e-12 74.7 76 48.7
ECA238G0025 Erigeron canadensis HOM05D000296 ORTHO05D000175 3.9e-12 74.7 75 52.0
Gohir.A04G079600 Gossypium hirsutum HOM05D000296 ORTHO05D000175 5.1e-12 74.3 88 48.9
Hma1.2p1_0111F.1_g053100 Hydrangea macrophylla HOM05D000296 ORTHO05D000175 8.8e-12 73.6 78 50.0
Hma1.2p1_1481F.1_g286100 Hydrangea macrophylla HOM05D000296 ORTHO05D000175 8.8e-12 73.6 78 50.0
SalBow4G2394 Salvia bowleyana HOM05D000296 ORTHO05D000175 8.8e-12 73.6 72 52.8
Cfa017435 Carpinus fangiana HOM05D000296 ORTHO05D000175 3.3e-11 71.6 86 46.5
CiPaw.09G188100 Carya illinoinensis HOM05D000296 ORTHO05D000175 3.3e-11 71.6 89 46.1
HanXRQChr14g0453771 Helianthus annuus HOM05D000296 ORTHO05D000175 3.3e-11 71.6 70 61.4
RcHm_v2.0_Chr3g0467461 Rosa chinensis HOM05D000296 ORTHO05D000175 3.3e-11 71.6 92 43.5
PSO170G6740 Papaver somniferum HOM05D000296 ORTHO05D000175 4.3e-11 71.2 70 42.9
CANSAT80G0372 Cannabis sativa HOM05D000296 ORTHO05D000175 5.7e-11 70.9 66 54.5
Gohir.D09G154500 Gossypium hirsutum HOM05D000296 ORTHO05D000175 9.7e-11 70.1 95 44.2
Gorai.006G175900 Gossypium raimondii HOM05D000296 ORTHO05D000175 9.7e-11 70.1 95 44.2
Manes.09G090321 Manihot esculenta HOM05D000296 ORTHO05D000175 9.7e-11 70.1 95 43.2
PSO017G0904 Papaver somniferum HOM05D000296 ORTHO05D000175 9.7e-11 70.1 70 42.9
Duzib128G1929 Durio zibethinus HOM05D000296 ORTHO05D000175 1.3e-10 69.7 72 48.6
CSS0002921 Camellia sinensis var. sinensis HOM05D000296 ORTHO05D000175 2.2e-10 68.9 69 53.6
Nitab4.5_0005039g0020 Nicotiana tabacum HOM05D000296 ORTHO05D000175 2.2e-10 68.9 55 69.1
PSO339G6620 Papaver somniferum HOM05D000296 ORTHO05D000175 2.2e-10 68.9 83 41.0
CSS0045578 Camellia sinensis var. sinensis HOM05D000296 ORTHO05D000175 2.8e-10 68.6 69 53.6
FAN09G4312 Fragaria x ananassa HOM05D000296 ORTHO05D000175 2.8e-10 68.6 71 47.9
THA.LOC104823429 Tarenaya hassleriana HOM05D000296 ORTHO05D000175 2.8e-10 68.6 70 50.0
Aqoxy2G02022 Aquilegia oxysepala HOM05D000296 ORTHO05D000175 3.7e-10 68.2 88 44.3
DCAR_017889 Daucus carota HOM05D000296 ORTHO05D000175 3.7e-10 68.2 65 47.7
Lsat_1_v5_gn_2_110661 Lactuca sativa HOM05D000296 ORTHO05D000175 3.7e-10 68.2 58 60.3
COL.COLO4_14864 Corchorus olitorius HOM05D000296 ORTHO05D000175 4.8e-10 67.8 79 46.8
Thhalv10016662m.g Eutrema salsugineum HOM05D000296 ORTHO05D000175 4.8e-10 67.8 76 46.1
FvH4_6g14390 Fragaria vesca HOM05D000296 ORTHO05D000175 4.8e-10 67.8 68 45.6
FAN14G2325 Fragaria x ananassa HOM05D000296 ORTHO05D000175 4.8e-10 67.8 68 45.6
Gohir.A09G158900 Gossypium hirsutum HOM05D000296 ORTHO05D000175 4.8e-10 67.8 77 48.1
Prupe.6G249400 Prunus persica HOM05D000296 ORTHO05D000175 4.8e-10 67.8 85 42.4
Aa31LG5G22870 Aethionema arabicum HOM05D000296 ORTHO05D000175 6.3e-10 67.4 76 51.3
AL4G33870 Arabidopsis lyrata HOM05D000296 ORTHO05D000175 1.8e-09 65.9 76 50.0
Sp4g19780 Schrenkiella parvula HOM05D000296 ORTHO05D000175 1.8e-09 65.9 83 45.8
CARHR132150 Cardamine hirsuta HOM05D000296 ORTHO05D000175 2.4e-09 65.5 71 47.9
Nn2g10466 Nelumbo nucifera HOM05D000296 ORTHO05D000175 4.1e-09 64.7 81 45.7
BcaC02g11854 Brassica carinata HOM05D000296 ORTHO05D000175 5.3e-09 64.3 76 44.7
BcaC02g07528 Brassica carinata HOM05D000296 ORTHO05D000175 6.9e-09 63.9 76 44.7
A04p28580 Brassica napus HOM05D000296 ORTHO05D000175 6.9e-09 63.9 76 44.7
BolC4t28095H Brassica oleracea HOM05D000296 ORTHO05D000175 6.9e-09 63.9 76 44.7
BraA04t18336Z Brassica rapa HOM05D000296 ORTHO05D000175 6.9e-09 63.9 76 44.7
Sc20g0004480 Simmondsia chinensis HOM05D000296 ORTHO05D000175 9.1e-09 63.5 86 47.7
AT2G37440 Arabidopsis thaliana HOM05D000296 ORTHO05D000175 1.5e-08 62.8 76 47.4
Haze_20734 Corylus avellana HOM05D000296 ORTHO05D000175 1.5e-08 62.8 83 45.8
Glyma.03G173000 Glycine max HOM05D000296 ORTHO05D000175 2.0e-08 62.4 78 43.6
MD12G1137500 Malus domestica HOM05D000296 ORTHO05D000175 2.0e-08 62.4 88 39.8
C04p65910 Brassica napus HOM05D000296 ORTHO05D000175 2.6e-08 62.0 65 50.8
MD04G1120100 Malus domestica HOM05D000296 ORTHO05D000175 5.9e-08 60.8 66 50.0
MBI05_g22914_MAGBIO Magnolia biondii HOM05D000296 ORTHO05D000175 1.0e-07 60.1 53 60.4
Medtr7g100070 Medicago truncatula HOM05D000296 ORTHO05D000175 1.0e-07 60.1 76 40.8
SGA_v2.0_scaffold126G33835 Striga asiatica HOM05D000296 ORTHO05D000175 1.3e-07 59.7 78 42.3
C03p24280 Brassica napus HOM05D000296 ORTHO05D000175 1.7e-07 59.3 84 42.9
Nn3g18280 Nelumbo nucifera HOM05D000296 ORTHO05D000175 1.7e-07 59.3 47 61.7
BcaC01g05616 Brassica carinata HOM05D000296 ORTHO05D000175 2.2e-07 58.9 80 45.0
A05p08500 Brassica napus HOM05D000296 ORTHO05D000175 2.2e-07 58.9 55 52.7
BolC3t14823H Brassica oleracea HOM05D000296 ORTHO05D000175 2.2e-07 58.9 80 45.0
BraA05t19819Z Brassica rapa HOM05D000296 ORTHO05D000175 2.2e-07 58.9 55 52.7
Carub.0004s1938 Capsella rubella HOM05D000296 ORTHO05D000175 2.2e-07 58.9 76 46.1
TPR.G21473 Trifolium pratense HOM05D000296 ORTHO05D051314 2.2e-07 58.9 76 39.5
BraA03t11307Z Brassica rapa HOM05D000296 ORTHO05D000175 2.9e-07 58.5 80 45.0
FAN02G3305 Fragaria x ananassa HOM05D000296 ORTHO05D000175 2.9e-07 58.5 70 44.3
A03p20660 Brassica napus HOM05D000296 ORTHO05D000175 3.8e-07 58.2 80 45.0
FAN05G1581 Fragaria x ananassa HOM05D000296 ORTHO05D000175 3.8e-07 58.2 65 46.2
BcaB06g28991 Brassica carinata HOM05D000296 ORTHO05D000175 6.5e-07 57.4 54 53.7
Phvul.001G170500 Phaseolus vulgaris HOM05D000296 ORTHO05D000175 6.5e-07 57.4 75 41.3
C04p10590 Brassica napus HOM05D000296 ORTHO05D000175 8.5e-07 57.0 53 52.8
BolC4t22650H Brassica oleracea HOM05D000296 ORTHO05D000175 8.5e-07 57.0 53 52.8
CsaV3_3G035120 Cucumis sativus L. HOM05D000296 ORTHO05D000175 8.5e-07 57.0 68 45.6
MBI05_g45250_MAGBIO Magnolia biondii HOM05D000296 ORTHO05D000175 1.4e-06 56.2 47 57.4
Carub.0005s2992 Capsella rubella HOM05D000296 ORTHO05D000175 3.2e-06 55.1 53 49.1
CiPaw.08G108100 Carya illinoinensis HOM05D000296 ORTHO05D000175 3.2e-06 55.1 68 36.8
ClCG10G020890 Citrullus lanatus HOM05D000296 ORTHO05D000175 4.2e-06 54.7 57 47.4
PSO648G0032 Papaver somniferum HOM05D000296 ORTHO05D000175 5.5e-06 54.3 62 48.4
PSO339G2193 Papaver somniferum HOM05D000296 ORTHO05D000175 7.2e-06 53.9 62 48.4
Sed0000999 Sechium edule HOM05D000296 ORTHO05D000175 7.2e-06 53.9 76 43.4
TWI77G0494 Tripterygium wilfordii HOM05D000296 ORTHO05D000175 7.2e-06 53.9 70 47.1


User provided reference genes

Program Settings