Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 2.0e-59 232.3 117 100.0
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 2.0e-51 205.7 120 90.8
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.8e-36 156.0 117 71.8
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 6.8e-36 154.1 117 70.9
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 5.6e-30 134.4 117 64.1
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 1.6e-29 132.9 117 63.2
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 2.8e-29 132.1 116 62.1
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 4.4e-27 124.8 119 56.3
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 1.7e-26 122.9 115 57.4
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 4.9e-26 121.3 114 57.0
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 4.9e-26 121.3 116 56.9
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 1.4e-25 119.8 113 58.4
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 1.9e-25 119.4 114 54.4
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 1.9e-25 119.4 113 56.6
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 1.9e-25 119.4 114 56.1
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 2.4e-25 119.0 116 54.3
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 3.2e-25 118.6 113 55.8
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 3.2e-25 118.6 113 57.5
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 4.1e-25 118.2 116 55.2
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 5.4e-25 117.9 113 56.6
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 7.0e-25 117.5 113 55.8
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 7.0e-25 117.5 115 53.9
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 7.0e-25 117.5 114 55.3
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 1.2e-24 116.7 113 54.0
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 2.0e-24 115.9 115 54.8
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 2.0e-24 115.9 114 52.6
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 3.5e-24 115.2 113 54.9
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 3.5e-24 115.2 113 54.9
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 3.5e-24 115.2 114 49.1
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 3.5e-24 115.2 114 53.5
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 4.6e-24 114.8 116 50.0
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 6.0e-24 114.4 116 50.0
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 6.0e-24 114.4 114 53.5
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 7.8e-24 114.0 113 54.0
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 7.8e-24 114.0 114 55.3
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 7.8e-24 114.0 113 48.7
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 1.0e-23 113.6 113 54.0
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 1.0e-23 113.6 112 53.6
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 1.3e-23 113.2 115 51.3
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 1.3e-23 113.2 111 55.9
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 1.7e-23 112.8 114 53.5
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 1.7e-23 112.8 112 52.7
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 3.0e-23 112.1 114 52.6
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 3.0e-23 112.1 116 50.0
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 3.0e-23 112.1 114 55.3
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 3.9e-23 111.7 114 52.6
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 5.0e-23 111.3 114 53.5
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 5.0e-23 111.3 115 53.0
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 5.0e-23 111.3 114 54.4
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 6.6e-23 110.9 114 49.1
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 6.6e-23 110.9 116 50.0
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 6.6e-23 110.9 115 52.2
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 6.6e-23 110.9 117 53.0
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 8.6e-23 110.5 113 54.9
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 8.6e-23 110.5 113 54.0
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 8.6e-23 110.5 113 54.0
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 1.1e-22 110.2 113 51.3
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 1.1e-22 110.2 113 51.3
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 1.1e-22 110.2 113 52.2
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.1e-22 110.2 105 56.2
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 1.1e-22 110.2 116 49.1
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.5e-22 109.8 116 49.1
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 2.5e-22 109.0 112 51.8
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 2.5e-22 109.0 113 52.2
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 3.3e-22 108.6 113 54.9
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 4.3e-22 108.2 115 51.3
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 7.3e-22 107.5 114 50.0
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 7.3e-22 107.5 113 51.3
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 9.5e-22 107.1 113 48.7
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 9.5e-22 107.1 115 52.2
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 1.2e-21 106.7 113 51.3
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 1.6e-21 106.3 115 50.4
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 1.6e-21 106.3 113 51.3
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 2.1e-21 105.9 115 49.6
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 3.6e-21 105.1 114 52.6
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 3.6e-21 105.1 113 51.3
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 3.6e-21 105.1 113 51.3
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 4.7e-21 104.8 116 47.4
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 4.7e-21 104.8 116 47.4
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 4.7e-21 104.8 116 47.4
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 4.7e-21 104.8 113 48.7
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 6.2e-21 104.4 119 44.5
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 6.2e-21 104.4 116 46.6
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 6.2e-21 104.4 114 50.9
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 6.2e-21 104.4 113 51.3
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 6.2e-21 104.4 105 53.3
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 6.2e-21 104.4 112 52.7
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 8.0e-21 104.0 106 54.7
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 1.1e-20 103.6 118 48.3
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 1.8e-20 102.8 116 44.8
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.8e-20 102.8 112 50.9
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 1.8e-20 102.8 112 50.9
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 2.3e-20 102.4 114 44.7
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 2.3e-20 102.4 112 48.2
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 2.3e-20 102.4 114 48.2
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 2.3e-20 102.4 113 49.6
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 3.1e-20 102.1 115 48.7
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 3.1e-20 102.1 111 49.5
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 4.0e-20 101.7 113 49.6
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 4.0e-20 101.7 113 49.6
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 5.2e-20 101.3 114 42.1
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 5.2e-20 101.3 105 55.2
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 5.2e-20 101.3 112 50.0
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 8.9e-20 100.5 114 42.1
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 1.2e-19 100.1 113 48.7
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 2.0e-19 99.4 113 47.8
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.6e-19 99.0 113 47.8
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 3.4e-19 98.6 114 43.9
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 7.5e-19 97.4 114 42.1
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 9.8e-19 97.1 116 41.4
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 9.8e-19 97.1 116 41.4
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 1.3e-18 96.7 114 45.6
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 1.3e-18 96.7 101 47.5
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 3.7e-18 95.1 105 50.5
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 1.1e-17 93.6 115 40.9
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 1.9e-17 92.8 105 49.5
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 2.4e-17 92.4 112 43.8
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 4.1e-17 91.7 105 48.6
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 5.4e-17 91.3 104 48.1
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 7.0e-17 90.9 113 44.2
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 7.0e-17 90.9 115 43.5
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 1.6e-16 89.7 111 44.1
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 1.1e-14 83.6 114 43.9
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 5.6e-14 81.3 114 41.2
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 8.1e-13 77.4 63 61.9
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 1.1e-12 77.0 62 64.5
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 2.7e-08 62.4 56 57.1
SalBow6G5718 Salvia bowleyana HOM05D006069 ORTHO05D008101 6.6e-07 57.8 55 56.4
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 5.6e-06 54.7 73 37.0


User provided reference genes

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