Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g029520 Solanum pennellii HOM05D003898 ORTHO05D004642 2.3e-179 632.1 319 100.0
Solyc12g056840.2 Solanum lycopersicum HOM05D003898 ORTHO05D004642 4.1e-176 621.3 319 98.4
PGSC0003DMG401016958 Solanum tuberosum HOM05D003898 ORTHO05D004642 4.5e-175 617.8 319 97.2
Nitab4.5_0000425g0260 Nicotiana tabacum HOM05D003898 ORTHO05D004642 7.2e-165 583.9 317 93.7
CAN.G47.19 Capsicum annuum HOM05D003898 ORTHO05D004642 2.2e-161 572.4 341 86.8
Peaxi162Scf00160g01643 Petunia axillaris HOM05D003898 ORTHO05D004642 3.5e-159 565.1 316 90.8
Nitab4.5_0006745g0040 Nicotiana tabacum HOM05D003898 ORTHO05D004642 5.7e-154 547.7 385 76.6
CAN.G617.2 Capsicum annuum HOM05D003898 ORTHO05D004642 2.2e-137 492.7 322 76.7
Sopen04g028670 Solanum pennellii HOM05D003898 ORTHO05D004642 4.9e-137 491.5 309 79.3
MSTRG.24959 Avicennia marina HOM05D003898 ORTHO05D004642 8.1e-132 474.2 310 76.1
Solyc04g072480.3 Solanum lycopersicum HOM05D003898 ORTHO05D004642 9.9e-130 467.2 339 71.1
SGA_v2.0_scaffold11G05890 Striga asiatica HOM05D003898 ORTHO05D004642 9.2e-128 460.7 318 73.6
QL12p035494 Quercus lobata HOM05D003898 ORTHO05D004642 6.0e-127 458.0 309 74.1
CiPaw.06G023700 Carya illinoinensis HOM05D003898 ORTHO05D004642 1.7e-126 456.4 309 74.1
Manes.02G157700 Manihot esculenta HOM05D003898 ORTHO05D004642 5.1e-126 454.9 304 74.0
Migut.C00215 Erythranthe guttata HOM05D003898 ORTHO05D004642 5.6e-125 451.4 305 73.4
Dinv13069 Davidia involucrata HOM05D003898 ORTHO05D004642 7.3e-125 451.1 318 72.3
Prupe.1G507900 Prunus persica HOM05D003898 ORTHO05D004642 1.6e-124 449.9 310 72.3
Thecc.08G115200 Theobroma cacao HOM05D003898 ORTHO05D004642 2.8e-124 449.1 304 73.7
MD08G1174000 Malus domestica HOM05D003898 ORTHO05D004642 6.2e-124 448.0 304 74.0
CSS0048138 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 1.1e-123 447.2 304 73.0
ECA246G0783 Erigeron canadensis HOM05D003898 ORTHO05D004642 1.1e-123 447.2 316 71.2
CSS0037064 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 2.4e-123 446.0 304 73.0
Nitab4.5_0001307g0170 Nicotiana tabacum HOM05D003898 ORTHO05D004642 2.4e-123 446.0 316 73.1
PGR044G1262 Punica granatum HOM05D003898 ORTHO05D004642 2.4e-123 446.0 304 72.4
Duzib093G1469 Durio zibethinus HOM05D003898 ORTHO05D004642 3.1e-123 445.7 304 74.3
TAR625G0437 Trochodendron aralioides HOM05D003898 ORTHO05D004642 4.0e-123 445.3 312 72.1
vmacro04776 Vaccinium macrocarpon HOM05D003898 ORTHO05D004642 6.8e-123 444.5 310 71.9
HanXRQChr05g0162311 Helianthus annuus HOM05D003898 ORTHO05D004642 1.2e-122 443.7 313 71.9
RcHm_v2.0_Chr7g0240421 Rosa chinensis HOM05D003898 ORTHO05D004642 3.4e-122 442.2 304 72.0
Lj4C109T16 Lonicera japonica HOM05D003898 ORTHO05D004642 4.4e-122 441.8 345 68.1
TWI12G0005 Tripterygium wilfordii HOM05D003898 ORTHO05D004642 9.9e-122 440.7 319 70.5
Actinidia33168 Actinidia chinensis HOM05D003898 ORTHO05D004642 1.3e-121 440.3 306 72.9
HanXRQChr01g0001161 Helianthus annuus HOM05D003898 ORTHO05D004642 2.2e-121 439.5 313 71.2
THA.LOC104813137 Tarenaya hassleriana HOM05D003898 ORTHO05D004642 1.1e-120 437.2 306 70.9
COL.COLO4_16517 Corchorus olitorius HOM05D003898 ORTHO05D004642 1.4e-120 436.8 304 72.0
Potri.002G090500 Populus trichocarpa HOM05D003898 ORTHO05D004642 3.2e-120 435.6 304 71.4
PSO210G6710 Papaver somniferum HOM05D003898 ORTHO05D004642 9.3e-120 434.1 304 72.4
Cpa.g.sc49.114 Carica papaya HOM05D003898 ORTHO05D004642 2.1e-119 433.0 314 68.5
PSO447G0107 Papaver somniferum HOM05D003898 ORTHO05D004642 2.7e-119 432.6 304 71.7
Rhsim07G0198900 Rhododendron simsii HOM05D003898 ORTHO05D004642 2.7e-119 432.6 313 70.0
CANSAT25G0948 Cannabis sativa HOM05D003898 ORTHO05D004642 3.5e-119 432.2 305 72.5
GSVIVG01008958001 Vitis vinifera HOM05D003898 ORTHO05D004642 3.5e-119 432.2 307 69.7
CiPaw.05G230800 Carya illinoinensis HOM05D003898 ORTHO05D004642 4.6e-119 431.8 309 71.2
FvH4_5g38420 Fragaria vesca HOM05D003898 ORTHO05D004642 4.6e-119 431.8 306 69.6
Ca_02530_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 6.0e-119 431.4 316 67.7
Gohir.D01G182400 Gossypium hirsutum HOM05D003898 ORTHO05D004642 6.0e-119 431.4 303 71.6
Gorai.002G220000 Gossypium raimondii HOM05D003898 ORTHO05D004642 6.0e-119 431.4 303 71.6
Cc10_g06070 Coffea canephora HOM05D003898 ORTHO05D004642 7.8e-119 431.0 271 78.6
Lsat_1_v5_gn_9_70200 Lactuca sativa HOM05D003898 ORTHO05D004642 1.3e-118 430.3 305 71.8
Sc16g0001430 Simmondsia chinensis HOM05D003898 ORTHO05D004642 1.7e-118 429.9 305 70.2
DCAR_028260 Daucus carota HOM05D003898 ORTHO05D004642 2.3e-118 429.5 315 69.2
Gohir.A01G187300 Gossypium hirsutum HOM05D003898 ORTHO05D004642 2.3e-118 429.5 303 71.3
RcHm_v2.0_Chr1g0340891 Rosa chinensis HOM05D003898 ORTHO05D004642 3.0e-118 429.1 304 70.1
Potri.005G170600 Populus trichocarpa HOM05D003898 ORTHO05D004642 1.5e-117 426.8 310 70.3
Aqoxy2G00480 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 5.6e-117 424.9 303 68.3
Medtr4g112080 Medicago truncatula HOM05D003898 ORTHO05D004642 7.3e-117 424.5 314 66.6
Ciclev10005436m.g Citrus clementina HOM05D003898 ORTHO05D004642 1.3e-116 423.7 303 71.0
ClCG08G010840 Citrullus lanatus HOM05D003898 ORTHO05D004642 1.6e-116 423.3 322 66.1
Psat5g107440 Pisum sativum HOM05D003898 ORTHO05D004642 2.1e-116 422.9 316 66.1
Glyma.06G107500 Glycine max HOM05D003898 ORTHO05D004642 3.1e-115 419.1 309 66.3
Oeu038191.1 Olea europaea HOM05D003898 ORTHO05D004642 3.1e-115 419.1 297 72.7
Lalb_Chr11g0065591 Lupinus albus HOM05D003898 ORTHO05D004642 6.9e-115 417.9 302 67.9
CARHR012640 Cardamine hirsuta HOM05D003898 ORTHO05D004642 1.2e-114 417.2 303 68.3
TPR.G32957 Trifolium pratense HOM05D003898 ORTHO05D004642 1.2e-114 417.2 317 65.3
Carub.0001s1201 Capsella rubella HOM05D003898 ORTHO05D004642 1.5e-114 416.8 303 67.0
MELO3C011378.2 Cucumis melo HOM05D003898 ORTHO05D004642 2.0e-114 416.4 318 65.7
Lalb_Chr08g0241771 Lupinus albus HOM05D003898 ORTHO05D004642 2.6e-114 416.0 302 67.2
CsaV3_6G035700 Cucumis sativus L. HOM05D003898 ORTHO05D004642 5.8e-114 414.8 318 66.0
Lj1g0002951 Lotus japonicus HOM05D003898 ORTHO05D004642 5.8e-114 414.8 311 65.9
Sabra02G0071500 Salix brachista HOM05D003898 ORTHO05D004642 5.8e-114 414.8 327 65.4
VMungo1309G1855 Vigna mungo HOM05D003898 ORTHO05D004642 9.9e-114 414.1 309 66.0
A10p33510 Brassica napus HOM05D003898 ORTHO05D004642 1.3e-113 413.7 303 67.3
FvH4_7g08221 Fragaria vesca HOM05D003898 ORTHO05D004642 1.3e-113 413.7 297 69.0
TPR.G26798 Trifolium pratense HOM05D003898 ORTHO05D004642 1.3e-113 413.7 309 66.3
EL10Ac6g15432 Beta vulgaris HOM05D003898 ORTHO05D004642 2.2e-113 412.9 317 65.3
Sed0026073 Sechium edule HOM05D003898 ORTHO05D004642 2.2e-113 412.9 312 66.7
Thhalv10014147m.g Eutrema salsugineum HOM05D003898 ORTHO05D004642 4.9e-113 411.8 303 67.7
FAN13G1941 Fragaria x ananassa HOM05D003898 ORTHO05D004642 6.4e-113 411.4 333 64.0
Sp6g40350 Schrenkiella parvula HOM05D003898 ORTHO05D004642 6.4e-113 411.4 303 67.7
Glyma.04G254600 Glycine max HOM05D003898 ORTHO05D004642 1.1e-112 410.6 309 66.0
Haze_00543 Corylus avellana HOM05D003898 ORTHO05D004642 1.9e-112 409.8 334 64.4
Solyc10g011840.3 Solanum lycopersicum HOM05D003898 ORTHO05D004642 2.4e-112 409.5 325 67.1
Cfa015947 Carpinus fangiana HOM05D003898 ORTHO05D004642 4.2e-112 408.7 270 74.8
C09p74420 Brassica napus HOM05D003898 ORTHO05D004642 7.1e-112 407.9 303 66.7
Phvul.009G026700 Phaseolus vulgaris HOM05D003898 ORTHO05D004642 7.1e-112 407.9 309 65.4
Lsat_1_v5_gn_6_68860 Lactuca sativa HOM05D003898 ORTHO05D004642 1.2e-111 407.1 273 74.4
BraA02t04709Z Brassica rapa HOM05D003898 ORTHO05D004642 2.1e-111 406.4 310 65.5
BcaNung04450 Brassica carinata HOM05D003898 ORTHO05D004642 7.9e-111 404.4 303 66.3
FAN08G2468 Fragaria x ananassa HOM05D003898 ORTHO05D004642 1.3e-110 403.7 326 62.9
CDE10G0849 Ceratophyllum demersum HOM05D003898 ORTHO05D004642 2.3e-110 402.9 316 66.1
BolC9t60175H Brassica oleracea HOM05D003898 ORTHO05D004642 3.0e-110 402.5 303 66.0
Medtr3g073550 Medicago truncatula HOM05D003898 ORTHO05D004642 3.0e-110 402.5 315 64.1
Aa31LG9G14440 Aethionema arabicum HOM05D003898 ORTHO05D004642 3.9e-110 402.1 289 68.9
C02p00370 Brassica napus HOM05D003898 ORTHO05D004642 1.5e-109 400.2 303 65.3
AUR62019012 Chenopodium quinoa HOM05D003898 ORTHO05D004642 2.5e-109 399.4 305 66.9
AT1G12350 Arabidopsis thaliana HOM05D003898 ORTHO05D004642 5.6e-109 398.3 303 66.0
BraA10t45381Z Brassica rapa HOM05D003898 ORTHO05D004642 7.3e-109 397.9 329 62.0
CANSAT01G0632 Cannabis sativa HOM05D003898 ORTHO05D004642 7.3e-109 397.9 307 68.4
TAR381G1034 Trochodendron aralioides HOM05D003898 ORTHO05D004642 1.6e-108 396.7 272 72.1
AUR62027853 Chenopodium quinoa HOM05D003898 ORTHO05D004642 6.2e-108 394.8 316 64.6
BcaNung06026 Brassica carinata HOM05D003898 ORTHO05D004642 1.8e-107 393.3 304 65.1
AL1G23670 Arabidopsis lyrata HOM05D003898 ORTHO05D004642 6.9e-107 391.3 303 65.0
Os02g0575200 Oryza sativa ssp. japonica HOM05D003898 ORTHO05D004642 3.4e-106 389.0 303 64.4
arahy.Tifrunner.gnm1.ann1.HG05DD Arachis hypogaea HOM05D003898 ORTHO05D004642 2.4e-104 382.9 275 67.3
Zm00001eb182920 Zea mays HOM05D003898 ORTHO05D004642 7.1e-104 381.3 301 64.5
arahy.Tifrunner.gnm1.ann1.PF76WK Arachis hypogaea HOM05D003898 ORTHO05D004642 6.0e-103 378.3 272 67.6
FAN01G1002 Fragaria x ananassa HOM05D000001 ORTHO05D000003 8.7e-102 374.4 305 63.9
Pp3c11_3000 Physcomitrium patens HOM05D003898 ORTHO05D004642 1.1e-101 374.0 304 60.9
arahy.Tifrunner.gnm1.ann1.K1QIEY Arachis hypogaea HOM05D003898 ORTHO05D004642 1.9e-101 373.2 360 55.8
arahy.Tifrunner.gnm1.ann1.Z23D3B Arachis hypogaea HOM05D003898 ORTHO05D004642 2.5e-101 372.9 281 65.8
SalBow7G2097 Salvia bowleyana HOM05D003898 ORTHO05D004642 4.3e-101 372.1 314 63.4
HPP92_006004 Vanilla planifolia HOM05D003898 ORTHO05D004642 1.8e-99 366.7 306 62.7
Os08g0176100 Oryza sativa ssp. japonica HOM05D003898 ORTHO05D004642 1.5e-98 363.6 310 60.0
SEGI_30417 Sequoiadendron giganteum HOM05D003898 ORTHO05D004642 1.5e-98 363.6 302 61.3
RcHm_v2.0_Chr1g0340911 Rosa chinensis HOM05D003898 ORTHO05D004642 2.7e-95 352.8 249 69.9
Zm00001eb414730 Zea mays HOM05D003898 ORTHO05D004642 7.9e-95 351.3 302 60.6
CSS0031031 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 1.5e-93 347.1 303 60.4
Nn1g05207 Nelumbo nucifera HOM05D003898 ORTHO05D004642 5.7e-93 345.1 230 72.2
FvH4_5g38402 Fragaria vesca HOM05D003898 ORTHO05D004642 4.8e-92 342.0 231 71.0
Mapoly0004s0284 Marchantia polymorpha HOM05D003898 ORTHO05D004642 6.9e-91 338.2 306 56.5
MD15G1360400 Malus domestica HOM05D003898 ORTHO05D004642 3.3e-85 319.3 225 71.1
Duzib116G0208 Durio zibethinus HOM05D003898 ORTHO05D004642 1.4e-83 313.9 304 57.2
SalBow1G7967 Salvia bowleyana HOM05D003898 ORTHO05D004642 3.8e-81 305.8 306 55.9
FAN06G3434 Fragaria x ananassa HOM05D000001 ORTHO05D000003 3.2e-80 302.8 315 52.4
ATR0564G227 Amborella trichopoda HOM05D003898 ORTHO05D004642 7.2e-80 301.6 228 65.8
PGSC0003DMG400027542 Solanum tuberosum HOM05D003898 ORTHO05D004642 3.9e-78 295.8 186 80.1
ClCG08G002640 Citrullus lanatus HOM05D003898 ORTHO05D004642 1.1e-75 287.7 454 42.5
AL6G11300 Arabidopsis lyrata HOM05D003898 ORTHO05D004642 6.9e-75 285.0 201 69.2
Sopen10g005660 Solanum pennellii HOM05D003898 ORTHO05D004642 3.6e-71 272.7 221 62.9
SMO137G0130 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 5.7e-69 265.4 302 48.7
Nitab4.5_0000553g0060 Nicotiana tabacum HOM05D003898 ORTHO05D004642 9.7e-69 264.6 245 60.0
Atru.chr13.1300 Acer truncatum HOM05D003898 ORTHO05D004642 1.3e-65 254.2 168 78.0
AT5G02080 Arabidopsis thaliana HOM05D003898 ORTHO05D004642 4.2e-64 249.2 183 67.8
PRCOL_00003493 Prasinoderma coloniale HOM05D003898 ORTHO05D004642 6.1e-63 245.4 350 42.9
FAN04G1035 Fragaria x ananassa HOM05D003898 ORTHO05D004642 8.0e-63 245.0 206 61.7
DCAR_027594 Daucus carota HOM05D003898 ORTHO05D004642 1.5e-61 240.7 211 61.1
BolC2t06037H Brassica oleracea HOM05D003898 ORTHO05D004642 2.0e-61 240.4 214 60.7
Dinv44720 Davidia involucrata HOM05D003898 ORTHO05D004642 1.8e-59 233.8 174 69.0
CDE10G0276 Ceratophyllum demersum HOM05D003898 ORTHO05D004642 2.4e-59 233.4 158 70.9
SMO137G0020 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 7.0e-59 231.9 267 49.1
Cre01.g048050 Chlamydomonas reinhardtii HOM05D003898 ORTHO05D004642 2.0e-58 230.3 305 43.6
AagrBONN_evm.TU.Sc2ySwM_344.1574 Anthoceros agrestis HOM05D003898 ORTHO05D004642 2.9e-57 226.5 201 58.2
Psat4g046560 Pisum sativum HOM05D003898 ORTHO05D011365 2.9e-57 226.5 168 68.5
Eucgr.F04382 Eucalyptus grandis HOM05D003898 ORTHO05D004642 1.2e-53 214.5 145 73.8
MCO09G707 Micromonas commoda HOM05D003898 ORTHO05D004642 5.7e-53 212.2 284 44.7
Lj4C710T9 Lonicera japonica HOM05D003898 ORTHO05D004642 2.7e-50 203.4 139 74.8
unitig_32.g11143 Utricularia gibba HOM05D003898 ORTHO05D004642 3.5e-50 203.0 132 76.5
Ca_25770_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 1.9e-48 197.2 148 66.2
SMO137G0337 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 3.2e-48 196.4 227 47.1
FAN18G1940 Fragaria x ananassa HOM05D003898 ORTHO05D004642 4.7e-47 192.6 194 54.1
Cfa024377 Carpinus fangiana HOM05D003898 ORTHO05D004642 2.2e-44 183.7 335 42.1
Atru.chr13.1301 Acer truncatum HOM05D003898 ORTHO05D004642 1.7e-41 174.1 135 61.5
SEGI_10597 Sequoiadendron giganteum HOM05D003898 ORTHO05D004642 3.6e-39 166.4 148 59.5
Atru.chr4.493 Acer truncatum HOM05D003898 ORTHO05D004642 8.0e-39 165.2 117 66.7
Atru.chr1.2069 Acer truncatum HOM05D003898 ORTHO05D004642 1.0e-38 164.9 116 67.2
CBR_g9000 Chara braunii HOM05D003898 ORTHO05D004642 5.4e-35 152.5 169 44.4
arahy.Tifrunner.gnm1.ann1.Z5SK82 Arachis hypogaea HOM05D003898 ORTHO05D004642 4.3e-32 142.9 182 44.5
Duzib041G0680 Durio zibethinus HOM05D003898 ORTHO05D004642 2.8e-31 140.2 106 68.9
CBR_g9001 Chara braunii HOM05D003898 ORTHO05D004642 1.1e-27 128.3 113 58.4
unitig_32.g11144 Utricularia gibba HOM05D003898 ORTHO05D004642 3.2e-27 126.7 149 50.3
arahy.Tifrunner.gnm1.ann1.N7W281 Arachis hypogaea HOM05D003898 ORTHO05D004642 4.6e-26 122.9 145 46.9
Aqoxy480s002 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 2.5e-24 117.1 124 50.0
QL10p044069 Quercus lobata HOM05D003898 ORTHO05D004642 5.4e-19 99.4 79 63.3
arahy.Tifrunner.gnm1.ann1.9J7JQ6 Arachis hypogaea HOM05D003898 ORTHO05D004642 3.5e-18 96.7 61 72.1
QL02p062685 Quercus lobata HOM05D003898 ORTHO05D004642 4.6e-18 96.3 79 63.3
Peaxi162Scf00756g00110 Petunia axillaris HOM05D003898 ORTHO05D004642 3.6e-15 86.7 110 44.5
QL10p009819 Quercus lobata HOM05D003898 ORTHO05D004642 2.0e-13 80.9 61 65.6
Ah.05g170600 Amaranthus hybridus HOM05D003898 ORTHO05D004642 2.6e-13 80.5 85 50.6
arahy.Tifrunner.gnm1.ann1.KW4E90 Arachis hypogaea HOM05D003898 ORTHO05D004642 9.9e-13 78.6 104 43.3
Aqoxy5G01116 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 1.3e-12 78.2 46 80.4
QL08p011560 Quercus lobata HOM05D003898 ORTHO05D004642 1.3e-12 78.2 61 65.6
Gohir.D02G117850 Gossypium hirsutum HOM05D034602 ORTHO05D048040 1.8e-06 57.8 38 71.1
Atru.chr5.2810 Acer truncatum HOM05D003898 ORTHO05D004642 8.9e-06 55.5 52 53.8


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