Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 3.6e-146 521.5 257 100.0
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 3.6e-146 521.5 257 100.0
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 1.0e-140 503.4 257 96.1
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 1.9e-139 499.2 257 94.9
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 5.5e-139 497.7 302 84.4
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 6.3e-135 484.2 265 92.1
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 2.2e-132 475.7 257 89.1
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 2.2e-132 475.7 257 89.5
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 2.1e-130 469.2 257 87.5
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 4.7e-130 468.0 257 86.4
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 3.0e-129 465.3 256 87.1
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 3.0e-129 465.3 257 86.8
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 5.2e-129 464.5 257 86.8
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 5.2e-129 464.5 257 87.2
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 8.8e-129 463.8 257 85.6
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 8.8e-129 463.8 256 86.7
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 8.8e-129 463.8 256 86.3
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 1.1e-128 463.4 257 86.4
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 2.0e-128 462.6 256 85.9
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 2.0e-128 462.6 256 85.9
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 2.0e-128 462.6 257 87.2
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 2.6e-128 462.2 255 88.2
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 2.6e-128 462.2 256 87.9
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 5.7e-128 461.1 256 87.5
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 7.4e-128 460.7 257 86.0
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 1.7e-127 459.5 257 87.5
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 2.8e-127 458.8 257 86.0
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 3.7e-127 458.4 257 85.6
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 4.8e-127 458.0 257 86.4
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 4.8e-127 458.0 256 87.5
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 4.8e-127 458.0 257 85.2
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 1.1e-126 456.8 257 85.6
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 1.4e-126 456.4 257 85.6
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 1.4e-126 456.4 257 85.6
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 2.4e-126 455.7 257 86.0
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 4.1e-126 454.9 257 84.4
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 7.0e-126 454.1 257 84.8
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 7.0e-126 454.1 257 84.8
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 7.0e-126 454.1 257 84.8
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 7.0e-126 454.1 257 84.8
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 7.0e-126 454.1 257 84.8
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 7.0e-126 454.1 255 85.9
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 7.0e-126 454.1 257 86.8
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 1.2e-125 453.4 257 84.4
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 1.2e-125 453.4 257 84.4
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 1.6e-125 453.0 257 87.2
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 1.6e-125 453.0 257 87.2
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 1.6e-125 453.0 255 84.3
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 1.6e-125 453.0 257 84.4
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 2.0e-125 452.6 257 85.6
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 2.6e-125 452.2 257 84.4
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 2.6e-125 452.2 254 85.0
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 4.5e-125 451.4 254 86.6
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 1.3e-124 449.9 257 84.0
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 1.3e-124 449.9 257 83.7
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 1.3e-124 449.9 257 83.7
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.3e-124 449.9 257 84.4
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.3e-124 449.9 257 84.8
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 1.7e-124 449.5 257 84.8
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 1.7e-124 449.5 257 86.0
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 2.2e-124 449.1 257 83.7
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 2.9e-124 448.7 257 85.6
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 3.8e-124 448.4 254 86.2
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 6.5e-124 447.6 257 84.8
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 1.1e-123 446.8 257 84.0
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 1.5e-123 446.4 257 83.3
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 1.9e-123 446.0 263 83.3
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 2.5e-123 445.7 257 83.3
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 3.2e-123 445.3 255 82.7
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 4.2e-123 444.9 258 83.7
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 7.2e-123 444.1 257 83.3
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 9.4e-123 443.7 271 80.4
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 1.6e-122 443.0 271 80.1
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 1.6e-122 443.0 257 83.7
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 1.6e-122 443.0 257 83.7
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 1.6e-122 443.0 257 83.7
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 6.1e-122 441.0 257 81.3
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 1.0e-121 440.3 257 83.3
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 1.8e-121 439.5 257 83.3
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 2.0e-120 436.0 257 81.7
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 2.0e-120 436.0 257 81.7
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 2.0e-120 436.0 257 81.7
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 4.4e-120 434.9 258 82.2
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 3.1e-118 428.7 257 79.4
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 7.0e-118 427.6 257 79.0
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 7.0e-118 427.6 257 80.9
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 1.3e-116 423.3 230 89.6
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 1.9e-115 419.5 255 78.0
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 6.1e-114 414.5 255 78.0
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 8.0e-114 414.1 255 77.6
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 1.2e-112 410.2 257 80.5
Nitab4.5_0004295g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 7.5e-112 407.5 223 91.0
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 1.7e-111 406.4 254 77.6
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 3.7e-111 405.2 252 77.4
vmacro21201 Vaccinium macrocarpon HOM05D005529 ORTHO05D006800 1.2e-109 400.2 214 87.9
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 2.7e-109 399.1 257 75.9
TAR381G0607 Trochodendron aralioides HOM05D005529 ORTHO05D006800 4.5e-109 398.3 281 73.7
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 3.2e-107 392.1 250 76.8
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 2.2e-103 379.4 257 73.9
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 3.1e-102 375.6 255 73.7
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 7.0e-102 374.4 231 77.9
Hma1.2p1_0358F.1_g134920 Hydrangea macrophylla HOM05D005529 ORTHO05D006800 2.7e-101 372.5 214 82.7
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 1.8e-97 359.8 255 69.0
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 2.7e-93 345.9 198 85.4
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 5.6e-91 338.2 247 68.0
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 2.8e-90 335.9 247 67.6
SMO141G0273 Selaginella moellendorffii HOM05D005529 ORTHO05D006800 2.6e-88 329.3 250 66.4
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 9.8e-88 327.4 203 76.8
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 9.2e-86 320.9 251 65.3
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 9.2e-78 294.3 159 88.7
CARHR290990 Cardamine hirsuta HOM05D005529 ORTHO05D006800 1.8e-73 280.0 153 85.0
Zm00001eb018520 Zea mays HOM05D005529 ORTHO05D006800 2.2e-71 273.1 170 75.9
Ca_10643_v3 Cicer arietinum L. HOM05D005529 ORTHO05D006800 9.6e-67 257.7 142 86.6
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 1.2e-66 257.3 132 92.4
PRCOL_00004850 Prasinoderma coloniale HOM05D005529 ORTHO05D006800 6.0e-61 238.4 254 50.4
Haze_27340 Corylus avellana HOM05D005529 ORTHO05D006800 3.0e-60 236.1 247 47.4
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 6.2e-58 228.4 205 62.4
Glyma.06G212500 Glycine max HOM05D005529 ORTHO05D006800 5.3e-57 225.3 155 74.8
CSS0032133 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 4.6e-53 212.2 116 82.8
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 3.9e-52 209.1 112 89.3
Glyma.09G074800 Glycine max HOM05D005529 ORTHO05D006800 4.8e-50 202.2 114 86.0
Cfa022509 Carpinus fangiana HOM05D005529 ORTHO05D006800 2.0e-48 196.8 272 40.4
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 2.6e-48 196.4 105 88.6
Lsat_1_v5_gn_8_71180 Lactuca sativa HOM05D005529 ORTHO05D006800 3.4e-48 196.1 156 62.2
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 1.3e-47 194.1 105 88.6
AUR62022308 Chenopodium quinoa HOM05D005529 ORTHO05D006800 1.4e-46 190.7 257 46.3
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 1.5e-43 180.6 105 84.8
Glyma.04G140500 Glycine max HOM05D005529 ORTHO05D006800 3.1e-41 172.9 104 82.7
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.5e-40 170.6 105 80.0
Actinidia17753 Actinidia chinensis HOM05D005529 ORTHO05D006800 2.4e-33 146.7 116 65.5
Lsat_1_v5_gn_3_73520 Lactuca sativa HOM05D005529 ORTHO05D006800 2.4e-33 146.7 91 72.5
SalBow7G1408 Salvia bowleyana HOM05D005529 ORTHO05D006800 4.3e-27 125.9 67 91.0
HPP92_020744 Vanilla planifolia HOM05D005529 ORTHO05D006800 2.0e-24 117.1 102 58.8
HPP92_020745 Vanilla planifolia HOM05D005529 ORTHO05D006800 2.5e-22 110.2 96 60.4
MD10G1041000 Malus domestica HOM05D005529 ORTHO05D006800 2.6e-19 100.1 60 78.3
HPP92_020839 Vanilla planifolia HOM05D005529 ORTHO05D006800 2.2e-15 87.0 55 74.5
Glyma.16G101900 Glycine max HOM05D005529 ORTHO05D006800 2.7e-13 80.1 60 70.0
VMungo0464G1177 Vigna mungo HOM05D005529 ORTHO05D006800 1.8e-09 67.4 40 85.0


User provided reference genes

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